RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 H7C423 109 aa9.7□□□□□ -0.86
CD4-208ENST00000538827 MPV17L2Q567V2 206 aa9.7□□□□□ -0.86
CD4-208ENST00000538827 RNASE13Q5GAN3 156 aaKnown RBP9.7□□□□□ -0.86
CD4-208ENST00000538827 TMEM141Q96I45 108 aa9.7□□□□□ -0.86
CD4-208ENST00000538827 TIMM17AQ99595 171 aa9.7□□□□□ -0.86
CD4-208ENST00000538827 OPRPNQ99935 248 aaPredicted RBP9.7□□□□□ -0.86
CD4-208ENST00000538827 MAP1LC3CQ9BXW4 147 aa9.7□□□□□ -0.86
CD4-208ENST00000538827 LINC00588Q9Y4M8 146 aa9.7□□□□□ -0.86
CD4-208ENST00000538827 IGLV4-3A0A075B6K6 122 aa9.69□□□□□ -0.86
CD4-208ENST00000538827 A0A087WX48 190 aa9.69□□□□□ -0.86
CD4-208ENST00000538827 PRSS1P07477 247 aa9.69□□□□□ -0.86
CD4-208ENST00000538827 PKIAP61925 76 aa9.69□□□□□ -0.86
CD4-208ENST00000538827 MRPL52Q86TS9 123 aaKnown RBP9.69□□□□□ -0.86
CD4-208ENST00000538827 Q8N3U1 123 aa9.69□□□□□ -0.86
CD4-208ENST00000538827 TIMM21Q9BVV7 248 aa9.69□□□□□ -0.86
CD4-208ENST00000538827 MRPS16Q9Y3D3 137 aaKnown RBP9.69□□□□□ -0.86
CD4-208ENST00000538827 IGIPA6NJ69 53 aa9.68□□□□□ -0.86
CD4-208ENST00000538827 IGHV3-30P01768 117 aa9.68□□□□□ -0.86
CD4-208ENST00000538827 IGHV3-33P01772 117 aa9.68□□□□□ -0.86
CD4-208ENST00000538827 C3orf79P0CE67 100 aa9.68□□□□□ -0.86
CD4-208ENST00000538827 IGHV3-30-3P0DP02 117 aa9.68□□□□□ -0.86
CD4-208ENST00000538827 IGHV3-30-5P0DP03 117 aa9.68□□□□□ -0.86
CD4-208ENST00000538827 ZNF25P17030 456 aaPredicted RBP9.68□□□□□ -0.86
CD4-208ENST00000538827 TCTAP57738 103 aa9.68□□□□□ -0.86
CD4-208ENST00000538827 RBX1P62877 108 aa9.68□□□□□ -0.86
CD4-208ENST00000538827 ZC2HC1BQ5TFG8 222 aa9.68□□□□□ -0.86
CD4-208ENST00000538827 Q8N976 141 aa9.68□□□□□ -0.86
CD4-208ENST00000538827 BAALCQ8WXS3 180 aa9.68□□□□□ -0.86
CD4-208ENST00000538827 PYGO1Q9Y3Y4 419 aa9.68□□□□□ -0.86
CD4-208ENST00000538827 IGLV4-60A0A075B6I1 120 aa9.67□□□□□ -0.86
CD4-208ENST00000538827 IGKV3OR2-268A0A0C4DH90 116 aa9.67□□□□□ -0.86
CD4-208ENST00000538827 CLPSL2Q6UWE3 100 aa9.67□□□□□ -0.86
CD4-208ENST00000538827 LOC105371267A0A1B0GV96 52 aa9.66□□□□□ -0.86
CD4-208ENST00000538827 ANGP03950 147 aaKnown RBP9.66□□□□□ -0.86
CD4-208ENST00000538827 PAPPA-AS1Q5QFB9 102 aa9.66□□□□□ -0.86
CD4-208ENST00000538827 TEX43Q6ZNM6 134 aa9.66□□□□□ -0.86
CD4-208ENST00000538827 C20orf202A1L168 122 aa9.65□□□□□ -0.86
CD4-208ENST00000538827 SYS1-DBNDD2H3BUS1 97 aa9.65□□□□□ -0.86
CD4-208ENST00000538827 MRPS36P82909 103 aaKnown RBP9.65□□□□□ -0.86
CD4-208ENST00000538827 C2orf88Q9BSF0 95 aa9.65□□□□□ -0.86
CD4-208ENST00000538827 VCX2Q9H322 139 aa9.65□□□□□ -0.86
CD4-208ENST00000538827 NPSP0C0P6 89 aa9.64□□□□□ -0.87
CD4-208ENST00000538827 PMVKQ15126 192 aa9.64□□□□□ -0.87
CD4-208ENST00000538827 SPATA12Q7Z6I5 190 aa9.64□□□□□ -0.87
CD4-208ENST00000538827 ZNF664Q8N3J9 261 aa9.64□□□□□ -0.87
CD4-208ENST00000538827 PMCHL2Q9BQD1 86 aa9.64□□□□□ -0.87
CD4-208ENST00000538827 CSDC2Q9Y534 153 aaKnown RBP9.64□□□□□ -0.87
CD4-208ENST00000538827 FRAS1Q86XX4 4008 aa9.63□□□□□ -0.87
CD4-208ENST00000538827 SIVA1O15304 175 aa9.63□□□□□ -0.87
CD4-208ENST00000538827 SCGB1D1O95968 90 aa9.63□□□□□ -0.87
CD4-208ENST00000538827 PLECQ15149 4684 aaKnown RBP9.63□□□□□ -0.87
CD4-208ENST00000538827 PET117Q6UWS5 81 aa9.63□□□□□ -0.87
CD4-208ENST00000538827 UPK3BQ9BT76 320 aa9.63□□□□□ -0.87
CD4-208ENST00000538827 CDC42SE2Q9NRR3 84 aa9.63□□□□□ -0.87
CD4-208ENST00000538827 CHTOPQ9Y3Y2 248 aaKnown RBP9.63□□□□□ -0.87
CD4-208ENST00000538827 TRAV13-1A0A0B4J241 112 aa9.62□□□□□ -0.87
CD4-208ENST00000538827 A0A1B0GUV1 79 aa9.62□□□□□ -0.87
CD4-208ENST00000538827 PRSS29PA6NIE9 313 aa9.62□□□□□ -0.87
CD4-208ENST00000538827 CRPP02741 224 aa9.62□□□□□ -0.87
CD4-208ENST00000538827 LINC01556Q5JQF7 62 aa9.62□□□□□ -0.87
CD4-208ENST00000538827 FAM104AQ969W3 186 aa9.62□□□□□ -0.87
CD4-208ENST00000538827 KLK12Q9UKR0 248 aa9.62□□□□□ -0.87
CD4-208ENST00000538827 TRAV12-1A0A0B4J245 112 aa9.61□□□□□ -0.87
CD4-208ENST00000538827 LINC00269Q8N2A0 174 aa9.61□□□□□ -0.87
CD4-208ENST00000538827 AMELXQ99217 191 aa9.61□□□□□ -0.87
CD4-208ENST00000538827 CST9LQ9H4G1 147 aa9.61□□□□□ -0.87
CD4-208ENST00000538827 DNAH10OSP0CZ25 163 aa9.6□□□□□ -0.87
CD4-208ENST00000538827 ODF1Q14990 250 aa9.6□□□□□ -0.87
CD4-208ENST00000538827 LGALS9CQ6DKI2 356 aa9.6□□□□□ -0.87
CD4-208ENST00000538827 MRPL35Q9NZE8 188 aaKnown RBP9.6□□□□□ -0.87
CD4-208ENST00000538827 F8VRH5 84 aa9.59□□□□□ -0.87
CD4-208ENST00000538827 REG3AQ06141 175 aa9.59□□□□□ -0.87
CD4-208ENST00000538827 LINC01545Q5VT33 79 aa9.59□□□□□ -0.87
CD4-208ENST00000538827 ATOH7Q8N100 152 aa9.59□□□□□ -0.87
CD4-208ENST00000538827 UBE2WQ96B02 151 aa9.59□□□□□ -0.87
CD4-208ENST00000538827 CHAC1Q9BUX1 264 aa9.59□□□□□ -0.87
CD4-208ENST00000538827 Q9H8V8 135 aa9.59□□□□□ -0.87
CD4-208ENST00000538827 ALMS1Q8TCU4 4167 aa9.58□□□□□ -0.88
CD4-208ENST00000538827 A0A0J9YXV3 536 aa9.58□□□□□ -0.88
CD4-208ENST00000538827 DPM2O94777 84 aa9.58□□□□□ -0.88
CD4-208ENST00000538827 UBE2D1P51668 147 aa9.58□□□□□ -0.88
CD4-208ENST00000538827 IGLV4-69A0A075B6H9 119 aa9.57□□□□□ -0.88
CD4-208ENST00000538827 IGKCP01834 107 aa9.57□□□□□ -0.88
CD4-208ENST00000538827 JOSD1Q15040 202 aaPredicted RBP9.57□□□□□ -0.88
CD4-208ENST00000538827 SS18Q15532 418 aa9.57□□□□□ -0.88
CD4-208ENST00000538827 GEMIN7Q9H840 131 aaKnown RBP9.57□□□□□ -0.88
CD4-208ENST00000538827 IGLV10-54A0A075B6I4 117 aa9.56□□□□□ -0.88
CD4-208ENST00000538827 LINC00959A0A1B0GUT2 108 aa9.56□□□□□ -0.88
CD4-208ENST00000538827 C11orf86A6NJI1 115 aa9.56□□□□□ -0.88
CD4-208ENST00000538827 PLNP26678 52 aa9.56□□□□□ -0.88
CD4-208ENST00000538827 PYY3Q5JQD4 70 aa9.56□□□□□ -0.88
CD4-208ENST00000538827 Q9HAA7 133 aa9.56□□□□□ -0.88
CD4-208ENST00000538827 TRAV9-2A0A087WT02 112 aa9.55□□□□□ -0.88
CD4-208ENST00000538827 CCL25O15444 150 aa9.55□□□□□ -0.88
CD4-208ENST00000538827 LY6G6CO95867 125 aa9.55□□□□□ -0.88
CD4-208ENST00000538827 IGLC3P0DOY3 106 aa9.55□□□□□ -0.88
CD4-208ENST00000538827 C10orf126Q8N4M7 172 aa9.55□□□□□ -0.88
CD4-208ENST00000538827 XCL1P47992 114 aa9.54□□□□□ -0.88
CD4-208ENST00000538827 TMEM170BQ5T4T1 132 aa9.54□□□□□ -0.88
CD4-208ENST00000538827 ENHOQ6UWT2 76 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms