RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 PYGO1Q9Y3Y4 419 aa11.84□□□□□ -0.51
CLN6-202ENST00000538696 VPS13DQ5THJ4 4388 aa11.83□□□□□ -0.52
CLN6-202ENST00000538696 DNAH1Q9P2D7 4330 aa11.83□□□□□ -0.52
CLN6-202ENST00000538696 TRBV25-1A0A075B6N4 114 aa11.83□□□□□ -0.52
CLN6-202ENST00000538696 TRBV6-8A0A0A6YYG3 113 aa11.83□□□□□ -0.52
CLN6-202ENST00000538696 PRSS29PA6NIE9 313 aa11.83□□□□□ -0.52
CLN6-202ENST00000538696 S100A12P80511 92 aa11.83□□□□□ -0.52
CLN6-202ENST00000538696 MAJINQ3KP22 176 aa11.83□□□□□ -0.52
CLN6-202ENST00000538696 TMEM97Q5BJF2 176 aa11.83□□□□□ -0.52
CLN6-202ENST00000538696 VAMP8Q9BV40 100 aa11.83□□□□□ -0.52
CLN6-202ENST00000538696 LINC00588Q9Y4M8 146 aa11.83□□□□□ -0.52
CLN6-202ENST00000538696 TIRAPP58753 221 aa11.82□□□□□ -0.52
CLN6-202ENST00000538696 PMVKQ15126 192 aa11.82□□□□□ -0.52
CLN6-202ENST00000538696 Q6ZUT4 128 aa11.82□□□□□ -0.52
CLN6-202ENST00000538696 TIMM21Q9BVV7 248 aa11.82□□□□□ -0.52
CLN6-202ENST00000538696 MRPL35Q9NZE8 188 aaKnown RBP11.82□□□□□ -0.52
CLN6-202ENST00000538696 CHTOPQ9Y3Y2 248 aaKnown RBP11.82□□□□□ -0.52
CLN6-202ENST00000538696 FGF6P10767 208 aa11.81□□□□□ -0.52
CLN6-202ENST00000538696 CCL18P55774 89 aa11.81□□□□□ -0.52
CLN6-202ENST00000538696 GAGE6Q13070 117 aa11.81□□□□□ -0.52
CLN6-202ENST00000538696 MRPS16Q9Y3D3 137 aaKnown RBP11.81□□□□□ -0.52
CLN6-202ENST00000538696 PAM16Q9Y3D7 125 aa11.81□□□□□ -0.52
CLN6-202ENST00000538696 TRAV9-2A0A087WT02 112 aa11.8□□□□□ -0.52
CLN6-202ENST00000538696 hDV102S1A0JD36 115 aa11.8□□□□□ -0.52
CLN6-202ENST00000538696 F8VRH5 84 aa11.8□□□□□ -0.52
CLN6-202ENST00000538696 RNASE13Q5GAN3 156 aaKnown RBP11.8□□□□□ -0.52
CLN6-202ENST00000538696 UBE2DNLQ8IWF7 75 aa11.8□□□□□ -0.52
CLN6-202ENST00000538696 ZNF664Q8N3J9 261 aa11.8□□□□□ -0.52
CLN6-202ENST00000538696 LINC00476Q8WZB0 136 aa11.8□□□□□ -0.52
CLN6-202ENST00000538696 CST9LQ9H4G1 147 aa11.8□□□□□ -0.52
CLN6-202ENST00000538696 UBE2L6O14933 153 aa11.79□□□□□ -0.52
CLN6-202ENST00000538696 DPM2O94777 84 aa11.79□□□□□ -0.52
CLN6-202ENST00000538696 NPSP0C0P6 89 aa11.79□□□□□ -0.52
CLN6-202ENST00000538696 MRPL52Q86TS9 123 aaKnown RBP11.79□□□□□ -0.52
CLN6-202ENST00000538696 CHCHD5Q9BSY4 110 aa11.79□□□□□ -0.52
CLN6-202ENST00000538696 PRO1933Q9H354 126 aa11.79□□□□□ -0.52
CLN6-202ENST00000538696 LYSTQ99698 3801 aa11.78□□□□□ -0.52
CLN6-202ENST00000538696 H7C423 109 aa11.78□□□□□ -0.52
CLN6-202ENST00000538696 IGKCP01834 107 aa11.78□□□□□ -0.52
CLN6-202ENST00000538696 MRPS36P82909 103 aaKnown RBP11.78□□□□□ -0.52
CLN6-202ENST00000538696 SPATA45Q537H7 98 aa11.78□□□□□ -0.52
CLN6-202ENST00000538696 LELP1Q5T871 98 aa11.78□□□□□ -0.52
CLN6-202ENST00000538696 AMELXQ99217 191 aa11.78□□□□□ -0.52
CLN6-202ENST00000538696 IGLV4-69A0A075B6H9 119 aa11.77□□□□□ -0.53
CLN6-202ENST00000538696 AMMECR1LQ6DCA0 310 aa11.77□□□□□ -0.53
CLN6-202ENST00000538696 DGAT2L7PQ6IED9 249 aa11.77□□□□□ -0.53
CLN6-202ENST00000538696 UPK3BQ9BT76 320 aa11.77□□□□□ -0.53
CLN6-202ENST00000538696 VCX2Q9H322 139 aa11.77□□□□□ -0.53
CLN6-202ENST00000538696 SACSQ9NZJ4 4579 aa11.76□□□□□ -0.53
CLN6-202ENST00000538696 LY6G6CO95867 125 aa11.76□□□□□ -0.53
CLN6-202ENST00000538696 SMAGPQ0VAQ4 97 aa11.76□□□□□ -0.53
CLN6-202ENST00000538696 PAPPA-AS1Q5QFB9 102 aa11.76□□□□□ -0.53
CLN6-202ENST00000538696 WFDC10BQ8IUB3 73 aa11.76□□□□□ -0.53
CLN6-202ENST00000538696 OR5A1Q8NGJ0 315 aa11.76□□□□□ -0.53
CLN6-202ENST00000538696 PLNP26678 52 aa11.75□□□□□ -0.53
CLN6-202ENST00000538696 ANKRD39Q53RE8 183 aa11.75□□□□□ -0.53
CLN6-202ENST00000538696 CSDC2Q9Y534 153 aaKnown RBP11.75□□□□□ -0.53
CLN6-202ENST00000538696 DNAH6Q9C0G6 4158 aa11.74□□□□□ -0.53
CLN6-202ENST00000538696 C11orf86A6NJI1 115 aa11.74□□□□□ -0.53
CLN6-202ENST00000538696 HSBP1L1C9JCN9 74 aa11.74□□□□□ -0.53
CLN6-202ENST00000538696 STPG4Q8N801 248 aa11.74□□□□□ -0.53
CLN6-202ENST00000538696 TRAV8-6A0A0B4J262 113 aa11.73□□□□□ -0.53
CLN6-202ENST00000538696 LCE6AA0A183 80 aa11.73□□□□□ -0.53
CLN6-202ENST00000538696 ZNF25P17030 456 aaPredicted RBP11.73□□□□□ -0.53
CLN6-202ENST00000538696 PKIAP61925 76 aa11.73□□□□□ -0.53
CLN6-202ENST00000538696 TMEM101Q96IK0 257 aa11.73□□□□□ -0.53
CLN6-202ENST00000538696 CDC42SE2Q9NRR3 84 aa11.73□□□□□ -0.53
CLN6-202ENST00000538696 IGLV4-60A0A075B6I1 120 aa11.72□□□□□ -0.53
CLN6-202ENST00000538696 A0A0J9YXV3 536 aa11.72□□□□□ -0.53
CLN6-202ENST00000538696 PCP4L1A6NKN8 68 aa11.72□□□□□ -0.53
CLN6-202ENST00000538696 IGLC3P0DOY3 106 aa11.72□□□□□ -0.53
CLN6-202ENST00000538696 C2orf88Q9BSF0 95 aa11.72□□□□□ -0.53
CLN6-202ENST00000538696 HYDINQ4G0P3 5121 aa11.71□□□□□ -0.53
CLN6-202ENST00000538696 NFE4Q86UQ8 179 aa11.71□□□□□ -0.53
CLN6-202ENST00000538696 CHAC1Q9BUX1 264 aa11.71□□□□□ -0.53
CLN6-202ENST00000538696 RYR2Q92736 4967 aa11.7□□□□□ -0.54
CLN6-202ENST00000538696 TMEM262E9PQX1 116 aa11.7□□□□□ -0.54
CLN6-202ENST00000538696 TSTD3H0UI37 97 aa11.7□□□□□ -0.54
CLN6-202ENST00000538696 SIVA1O15304 175 aa11.7□□□□□ -0.54
CLN6-202ENST00000538696 UBE2D1P51668 147 aa11.7□□□□□ -0.54
CLN6-202ENST00000538696 RBX1P62877 108 aa11.7□□□□□ -0.54
CLN6-202ENST00000538696 MPV17L2Q567V2 206 aa11.7□□□□□ -0.54
CLN6-202ENST00000538696 Q9H8V8 135 aa11.7□□□□□ -0.54
CLN6-202ENST00000538696 KMT2CQ8NEZ4 4911 aaKnown RBP11.69□□□□□ -0.54
CLN6-202ENST00000538696 Q8N3U1 123 aa11.69□□□□□ -0.54
CLN6-202ENST00000538696 DNAH10OSP0CZ25 163 aa11.68□□□□□ -0.54
CLN6-202ENST00000538696 ZNF22P17026 224 aaPredicted RBP11.67□□□□□ -0.54
CLN6-202ENST00000538696 LINC01556Q5JQF7 62 aa11.67□□□□□ -0.54
CLN6-202ENST00000538696 C14orf144Q96I85 54 aa11.67□□□□□ -0.54
CLN6-202ENST00000538696 IGKV2D-26A0A0A0MRZ7 120 aa11.66□□□□□ -0.54
CLN6-202ENST00000538696 TRAV13-1A0A0B4J241 112 aa11.66□□□□□ -0.54
CLN6-202ENST00000538696 A0A1B0GUV1 79 aa11.66□□□□□ -0.54
CLN6-202ENST00000538696 IGHV3-30P01768 117 aa11.66□□□□□ -0.54
CLN6-202ENST00000538696 IGHV3-33P01772 117 aa11.66□□□□□ -0.54
CLN6-202ENST00000538696 IGHV3-30-3P0DP02 117 aa11.66□□□□□ -0.54
CLN6-202ENST00000538696 IGHV3-30-5P0DP03 117 aa11.66□□□□□ -0.54
CLN6-202ENST00000538696 TP73-AS1Q9UF72 201 aa11.66□□□□□ -0.54
CLN6-202ENST00000538696 TINCRA0A1B0GVN0 87 aa11.65□□□□□ -0.54
CLN6-202ENST00000538696 TMEM170BQ5T4T1 132 aa11.65□□□□□ -0.54
CLN6-202ENST00000538696 IGKV3OR2-268A0A0C4DH90 116 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms