RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 RBX1P62877 108 aa8.73□□□□□ -1.01
CHFR-216ENST00000538235 Q0VG73 95 aa8.73□□□□□ -1.01
CHFR-216ENST00000538235 ENHOQ6UWT2 76 aa8.73□□□□□ -1.01
CHFR-216ENST00000538235 ST20Q9HBF5 79 aa8.73□□□□□ -1.01
CHFR-216ENST00000538235 KLK12Q9UKR0 248 aa8.73□□□□□ -1.01
CHFR-216ENST00000538235 TRBV25-1A0A075B6N4 114 aa8.72□□□□□ -1.01
CHFR-216ENST00000538235 CKS2P33552 79 aa8.72□□□□□ -1.01
CHFR-216ENST00000538235 AMTP48728 403 aa8.72□□□□□ -1.01
CHFR-216ENST00000538235 COTL1Q14019 142 aa8.72□□□□□ -1.01
CHFR-216ENST00000538235 KIAA1644Q3SXP7 199 aa8.72□□□□□ -1.01
CHFR-216ENST00000538235 CLPSL2Q6UWE3 100 aa8.72□□□□□ -1.01
CHFR-216ENST00000538235 TMEM243Q9BU79 118 aa8.72□□□□□ -1.01
CHFR-216ENST00000538235 VAMP8Q9BV40 100 aa8.72□□□□□ -1.01
CHFR-216ENST00000538235 I3L3M4 83 aa8.71□□□□□ -1.02
CHFR-216ENST00000538235 ZNF25P17030 456 aaPredicted RBP8.71□□□□□ -1.02
CHFR-216ENST00000538235 KRTAP26-1Q6PEX3 210 aa8.71□□□□□ -1.02
CHFR-216ENST00000538235 TEX43Q6ZNM6 134 aa8.71□□□□□ -1.02
CHFR-216ENST00000538235 FAM104AQ969W3 186 aa8.71□□□□□ -1.02
CHFR-216ENST00000538235 SMIM2Q9BVW6 85 aa8.71□□□□□ -1.02
CHFR-216ENST00000538235 LRCOL1A6NCL2 159 aa8.7□□□□□ -1.02
CHFR-216ENST00000538235 KRTAP10-2P60368 255 aa8.7□□□□□ -1.02
CHFR-216ENST00000538235 LAGE3Q14657 143 aa8.7□□□□□ -1.02
CHFR-216ENST00000538235 PMCHL1Q16048 86 aa8.7□□□□□ -1.02
CHFR-216ENST00000538235 TMEM97Q5BJF2 176 aa8.7□□□□□ -1.02
CHFR-216ENST00000538235 LINC00336Q6ZUF6 198 aa8.7□□□□□ -1.02
CHFR-216ENST00000538235 PRELID3AQ96N28 172 aa8.7□□□□□ -1.02
CHFR-216ENST00000538235 SNHG12Q9BXW3 62 aa8.7□□□□□ -1.02
CHFR-216ENST00000538235 GNB1LQ9BYB4 327 aa8.7□□□□□ -1.02
CHFR-216ENST00000538235 APCSP02743 223 aa8.69□□□□□ -1.02
CHFR-216ENST00000538235 PMCHP20382 165 aa8.69□□□□□ -1.02
CHFR-216ENST00000538235 RPL32P62910 135 aaKnown RBP8.69□□□□□ -1.02
CHFR-216ENST00000538235 CDPF1Q6NVV7 123 aa8.69□□□□□ -1.02
CHFR-216ENST00000538235 ORMDL3Q8N138 153 aa8.69□□□□□ -1.02
CHFR-216ENST00000538235 C10orf126Q8N4M7 172 aa8.69□□□□□ -1.02
CHFR-216ENST00000538235 PRR34Q9NV39 138 aa8.69□□□□□ -1.02
CHFR-216ENST00000538235 UQCR10Q9UDW1 63 aa8.69□□□□□ -1.02
CHFR-216ENST00000538235 APOBP04114 4563 aaKnown RBP8.69□□□□□ -1.02
CHFR-216ENST00000538235 KIAA1109Q2LD37 5005 aa8.68□□□□□ -1.02
CHFR-216ENST00000538235 A0A087WX48 190 aa8.68□□□□□ -1.02
CHFR-216ENST00000538235 TMEM262E9PQX1 116 aa8.68□□□□□ -1.02
CHFR-216ENST00000538235 K7EP13 123 aa8.68□□□□□ -1.02
CHFR-216ENST00000538235 UBE2WQ96B02 151 aa8.68□□□□□ -1.02
CHFR-216ENST00000538235 C20orf78Q9BR46 151 aa8.68□□□□□ -1.02
CHFR-216ENST00000538235 TRAV9-2A0A087WT02 112 aa8.67□□□□□ -1.02
CHFR-216ENST00000538235 A0A087WTM6 91 aa8.67□□□□□ -1.02
CHFR-216ENST00000538235 ANGP03950 147 aaKnown RBP8.67□□□□□ -1.02
CHFR-216ENST00000538235 FGF6P10767 208 aa8.67□□□□□ -1.02
CHFR-216ENST00000538235 BAGE3Q86Y29 109 aa8.67□□□□□ -1.02
CHFR-216ENST00000538235 LINC00269Q8N2A0 174 aa8.67□□□□□ -1.02
CHFR-216ENST00000538235 ORAOV1Q8WV07 137 aa8.67□□□□□ -1.02
CHFR-216ENST00000538235 DNAH8Q96JB1 4490 aa8.67□□□□□ -1.02
CHFR-216ENST00000538235 A0A1B0GUV1 79 aa8.66□□□□□ -1.02
CHFR-216ENST00000538235 PRSS47A8MTI9 375 aa8.66□□□□□ -1.02
CHFR-216ENST00000538235 VCYO14598 125 aa8.66□□□□□ -1.02
CHFR-216ENST00000538235 HLA-DQA1P01909 254 aa8.66□□□□□ -1.02
CHFR-216ENST00000538235 PPBPP02775 128 aa8.66□□□□□ -1.02
CHFR-216ENST00000538235 RPL39P62891 51 aaKnown RBP8.66□□□□□ -1.02
CHFR-216ENST00000538235 LOC389332A0A1B0GUA5 103 aa8.65□□□□□ -1.02
CHFR-216ENST00000538235 LECT2O14960 151 aa8.65□□□□□ -1.02
CHFR-216ENST00000538235 MRPL18Q9H0U6 180 aaKnown RBP8.65□□□□□ -1.02
CHFR-216ENST00000538235 UBE2D4Q9Y2X8 147 aa8.65□□□□□ -1.02
CHFR-216ENST00000538235 IGLV10-54A0A075B6I4 117 aa8.64□□□□□ -1.03
CHFR-216ENST00000538235 EREGO14944 169 aa8.64□□□□□ -1.03
CHFR-216ENST00000538235 REG3AQ06141 175 aa8.64□□□□□ -1.03
CHFR-216ENST00000538235 RNASE13Q5GAN3 156 aaKnown RBP8.64□□□□□ -1.03
CHFR-216ENST00000538235 Q6ZUT4 128 aa8.64□□□□□ -1.03
CHFR-216ENST00000538235 URB1-AS1Q96HZ7 61 aa8.64□□□□□ -1.03
CHFR-216ENST00000538235 ALKBH7Q9BT30 221 aaPredicted RBP8.64□□□□□ -1.03
CHFR-216ENST00000538235 RYR1P21817 5038 aa8.64□□□□□ -1.03
CHFR-216ENST00000538235 IGKV2D-24A0A075B6R9 120 aa8.63□□□□□ -1.03
CHFR-216ENST00000538235 PPP1R17O96001 155 aa8.63□□□□□ -1.03
CHFR-216ENST00000538235 SPATA12Q7Z6I5 190 aa8.63□□□□□ -1.03
CHFR-216ENST00000538235 NFE4Q86UQ8 179 aa8.63□□□□□ -1.03
CHFR-216ENST00000538235 OPRPNQ99935 248 aaPredicted RBP8.63□□□□□ -1.03
CHFR-216ENST00000538235 TRAV8-3A0A0A6YYJ7 113 aa8.62□□□□□ -1.03
CHFR-216ENST00000538235 UBE2L6O14933 153 aa8.62□□□□□ -1.03
CHFR-216ENST00000538235 G0S2P27469 103 aa8.62□□□□□ -1.03
CHFR-216ENST00000538235 FCER1GP30273 86 aa8.62□□□□□ -1.03
CHFR-216ENST00000538235 IFI27P40305 119 aaPredicted RBP8.62□□□□□ -1.03
CHFR-216ENST00000538235 RNASEKQ6P5S7 137 aaKnown RBP8.62□□□□□ -1.03
CHFR-216ENST00000538235 Q8N8P6 123 aa8.62□□□□□ -1.03
CHFR-216ENST00000538235 BAALCQ8WXS3 180 aa8.62□□□□□ -1.03
CHFR-216ENST00000538235 MAP1LC3AQ9H492 121 aa8.62□□□□□ -1.03
CHFR-216ENST00000538235 LAMTOR2Q9Y2Q5 125 aa8.62□□□□□ -1.03
CHFR-216ENST00000538235 HERC2O95714 4834 aa8.61□□□□□ -1.03
CHFR-216ENST00000538235 IGKV3OR2-268A0A0C4DH90 116 aa8.61□□□□□ -1.03
CHFR-216ENST00000538235 H7C423 109 aa8.61□□□□□ -1.03
CHFR-216ENST00000538235 HNRNPA3P51991 378 aaKnown RBP8.61□□□□□ -1.03
CHFR-216ENST00000538235 KIR2DL4Q99706 377 aa8.61□□□□□ -1.03
CHFR-216ENST00000538235 KRTAP17-1Q9BYP8 105 aa8.61□□□□□ -1.03
CHFR-216ENST00000538235 CDC42SE2Q9NRR3 84 aa8.61□□□□□ -1.03
CHFR-216ENST00000538235 HSPG2P98160 4391 aa8.61□□□□□ -1.03
CHFR-216ENST00000538235 CRPP02741 224 aa8.6□□□□□ -1.03
CHFR-216ENST00000538235 MIAQ16674 131 aa8.6□□□□□ -1.03
CHFR-216ENST00000538235 NTN5Q8WTR8 489 aaPredicted RBP8.6□□□□□ -1.03
CHFR-216ENST00000538235 ANKRD39Q53RE8 183 aa8.59□□□□□ -1.03
CHFR-216ENST00000538235 ZC2HC1BQ5TFG8 222 aa8.59□□□□□ -1.03
CHFR-216ENST00000538235 AMMECR1LQ6DCA0 310 aa8.59□□□□□ -1.03
CHFR-216ENST00000538235 C18orf32Q8TCD1 76 aa8.59□□□□□ -1.03
CHFR-216ENST00000538235 A0A096LNJ9 63 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms