RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 IGLC6P0CF74 106 aa5.05□□□□□ -1.6
MSH6-209ENST00000538136 SMAGPQ0VAQ4 97 aa5.05□□□□□ -1.6
MSH6-209ENST00000538136 ODF3Q96PU9 254 aa5.05□□□□□ -1.6
MSH6-209ENST00000538136 CHAC1Q9BUX1 264 aa5.05□□□□□ -1.6
MSH6-209ENST00000538136 A0A087WWC5 75 aa5.04□□□□□ -1.6
MSH6-209ENST00000538136 LINC00315P59091 139 aa5.04□□□□□ -1.6
MSH6-209ENST00000538136 PAPPA-AS1Q5QFB9 102 aa5.04□□□□□ -1.6
MSH6-209ENST00000538136 C18orf32Q8TCD1 76 aa5.04□□□□□ -1.6
MSH6-209ENST00000538136 C14orf144Q96I85 54 aa5.04□□□□□ -1.6
MSH6-209ENST00000538136 HSPB8Q9UJY1 196 aa5.04□□□□□ -1.6
MSH6-209ENST00000538136 TRAV8-3A0A0A6YYJ7 113 aa5.04□□□□□ -1.6
MSH6-209ENST00000538136 TRBV6-4A0A1B0GX49 114 aa5.04□□□□□ -1.6
MSH6-209ENST00000538136 TDRG1Q3Y452 100 aa5.04□□□□□ -1.6
MSH6-209ENST00000538136 CHCHD10Q8WYQ3 142 aaPredicted RBP5.04□□□□□ -1.6
MSH6-209ENST00000538136 C9orf85Q96MD7 179 aa5.04□□□□□ -1.6
MSH6-209ENST00000538136 TTTY13Q9BZ97 58 aa5.04□□□□□ -1.6
MSH6-209ENST00000538136 C2orf82Q6UX34 121 aa5.04□□□□□ -1.6
MSH6-209ENST00000538136 CHTOPQ9Y3Y2 248 aaKnown RBP5.04□□□□□ -1.6
MSH6-209ENST00000538136 HIST1H2BKO60814 126 aa5.03□□□□□ -1.6
MSH6-209ENST00000538136 HIST1H2BJP06899 126 aa5.03□□□□□ -1.6
MSH6-209ENST00000538136 HIST1H2BOP23527 126 aa5.03□□□□□ -1.6
MSH6-209ENST00000538136 HIST1H2BBP33778 126 aa5.03□□□□□ -1.6
MSH6-209ENST00000538136 HIST1H2BDP58876 126 aa5.03□□□□□ -1.6
MSH6-209ENST00000538136 HERVK_113P61574 105 aa5.03□□□□□ -1.6
MSH6-209ENST00000538136 HIST1H2BCP62807 126 aa5.03□□□□□ -1.6
MSH6-209ENST00000538136 HIST2H2BEQ16778 126 aa5.03□□□□□ -1.6
MSH6-209ENST00000538136 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.03□□□□□ -1.6
MSH6-209ENST00000538136 HIST1H2BHQ93079 126 aa5.03□□□□□ -1.6
MSH6-209ENST00000538136 HIST1H2BNQ99877 126 aa5.03□□□□□ -1.6
MSH6-209ENST00000538136 HIST1H2BMQ99879 126 aa5.03□□□□□ -1.6
MSH6-209ENST00000538136 GNB1LQ9BYB4 327 aa5.03□□□□□ -1.6
MSH6-209ENST00000538136 K7EMI3 77 aa5.03□□□□□ -1.6
MSH6-209ENST00000538136 COX19Q49B96 90 aa5.03□□□□□ -1.6
MSH6-209ENST00000538136 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.03□□□□□ -1.6
MSH6-209ENST00000538136 TRBV10-1A0A0K0K1A3 114 aa5.03□□□□□ -1.6
MSH6-209ENST00000538136 RMI2Q96E14 147 aa5.03□□□□□ -1.6
MSH6-209ENST00000538136 A0A1B0GW15 77 aa5.02□□□□□ -1.61
MSH6-209ENST00000538136 C16orf90A8MZG2 172 aa5.02□□□□□ -1.61
MSH6-209ENST00000538136 ATP5L2Q7Z4Y8 100 aa5.02□□□□□ -1.61
MSH6-209ENST00000538136 MRPL35Q9NZE8 188 aaKnown RBP5.02□□□□□ -1.61
MSH6-209ENST00000538136 COX7A2LO14548 114 aa5.02□□□□□ -1.61
MSH6-209ENST00000538136 CTRLP40313 264 aa5.02□□□□□ -1.61
MSH6-209ENST00000538136 SPAG11BQ08648 103 aa5.02□□□□□ -1.61
MSH6-209ENST00000538136 NUPR1O60356 82 aa5.02□□□□□ -1.61
MSH6-209ENST00000538136 CT83Q5H943 113 aa5.02□□□□□ -1.61
MSH6-209ENST00000538136 GFRA4Q9GZZ7 299 aa5.02□□□□□ -1.61
MSH6-209ENST00000538136 MAJINQ3KP22 176 aa5.02□□□□□ -1.61
MSH6-209ENST00000538136 TM2D2Q9BX73 214 aa5.02□□□□□ -1.61
MSH6-209ENST00000538136 A0A096LNI7 61 aa5.01□□□□□ -1.61
MSH6-209ENST00000538136 A6NDN8 102 aa5.01□□□□□ -1.61
MSH6-209ENST00000538136 H3BRM9 83 aa5.01□□□□□ -1.61
MSH6-209ENST00000538136 LELP1Q5T871 98 aa5.01□□□□□ -1.61
MSH6-209ENST00000538136 TMEM141Q96I45 108 aa5.01□□□□□ -1.61
MSH6-209ENST00000538136 APOMO95445 188 aa5.01□□□□□ -1.61
MSH6-209ENST00000538136 COX6A2Q02221 97 aa5.01□□□□□ -1.61
MSH6-209ENST00000538136 C9orf116Q5BN46 136 aaPredicted RBP5.01□□□□□ -1.61
MSH6-209ENST00000538136 SMIM12Q96EX1 92 aa5.01□□□□□ -1.61
MSH6-209ENST00000538136 TRBV7-9A0A0J9YWB2 115 aa5.01□□□□□ -1.61
MSH6-209ENST00000538136 COLCA2A8K830 154 aa5.01□□□□□ -1.61
MSH6-209ENST00000538136 TTC32Q5I0X7 151 aa5.01□□□□□ -1.61
MSH6-209ENST00000538136 Q8N8P6 123 aa5.01□□□□□ -1.61
MSH6-209ENST00000538136 VAMP8Q9BV40 100 aa5□□□□□ -1.61
MSH6-209ENST00000538136 IGLV5-52A0A0A0MRZ9 124 aa5□□□□□ -1.61
MSH6-209ENST00000538136 LINC00587B1AMM8 73 aa5□□□□□ -1.61
MSH6-209ENST00000538136 SPATA12Q7Z6I5 190 aa5□□□□□ -1.61
MSH6-209ENST00000538136 C10orf126Q8N4M7 172 aa5□□□□□ -1.61
MSH6-209ENST00000538136 RNF185Q96GF1 192 aa5□□□□□ -1.61
MSH6-209ENST00000538136 TRBV24-1A0A075B6N3 115 aa4.99□□□□□ -1.61
MSH6-209ENST00000538136 PLAC8L1A1L4L8 177 aa4.99□□□□□ -1.61
MSH6-209ENST00000538136 FAM231BA6NCW3 169 aa4.99□□□□□ -1.61
MSH6-209ENST00000538136 C3orf84H3BNL1 204 aa4.99□□□□□ -1.61
MSH6-209ENST00000538136 UBE2D3P61077 147 aa4.99□□□□□ -1.61
MSH6-209ENST00000538136 UBE2D2P62837 147 aa4.99□□□□□ -1.61
MSH6-209ENST00000538136 SH2D6Q7Z4S9 175 aa4.99□□□□□ -1.61
MSH6-209ENST00000538136 FAM19A5Q7Z5A7 132 aaPredicted RBP4.99□□□□□ -1.61
MSH6-209ENST00000538136 C6orf223Q8N319 242 aa4.99□□□□□ -1.61
MSH6-209ENST00000538136 C20orf203Q8NBC4 194 aa4.99□□□□□ -1.61
MSH6-209ENST00000538136 NBDYA0A0U1RRE5 68 aa4.99□□□□□ -1.61
MSH6-209ENST00000538136 PMVKQ15126 192 aa4.99□□□□□ -1.61
MSH6-209ENST00000538136 ERASQ7Z444 233 aa4.99□□□□□ -1.61
MSH6-209ENST00000538136 ZNF664Q8N3J9 261 aa4.99□□□□□ -1.61
MSH6-209ENST00000538136 CDKN2A-AS1Q9UH64 79 aa4.99□□□□□ -1.61
MSH6-209ENST00000538136 A0A087WZ39 114 aa4.99□□□□□ -1.61
MSH6-209ENST00000538136 USP17L23D6RBM5 183 aa4.99□□□□□ -1.61
MSH6-209ENST00000538136 TIMM21Q9BVV7 248 aa4.99□□□□□ -1.61
MSH6-209ENST00000538136 HNRNPA3P51991 378 aaKnown RBP4.98□□□□□ -1.61
MSH6-209ENST00000538136 NTM-AS1Q6ZSK4 140 aa4.98□□□□□ -1.61
MSH6-209ENST00000538136 RAB37Q96AX2 223 aa4.98□□□□□ -1.61
MSH6-209ENST00000538136 ZNF815PA8K554 130 aa4.98□□□□□ -1.61
MSH6-209ENST00000538136 LINC00476Q8WZB0 136 aa4.98□□□□□ -1.61
MSH6-209ENST00000538136 SCGB1C2P0DMR2 95 aa4.98□□□□□ -1.61
MSH6-209ENST00000538136 ZNF25P17030 456 aaPredicted RBP4.98□□□□□ -1.61
MSH6-209ENST00000538136 CHTF8P0CG12 524 aa4.97□□□□□ -1.61
MSH6-209ENST00000538136 TNP2Q05952 138 aa4.97□□□□□ -1.61
MSH6-209ENST00000538136 KRTAP21-3Q3LHN1 58 aa4.97□□□□□ -1.61
MSH6-209ENST00000538136 S100A7L2Q5SY68 101 aa4.97□□□□□ -1.61
MSH6-209ENST00000538136 BOD1L2Q8IYS8 172 aa4.97□□□□□ -1.61
MSH6-209ENST00000538136 HIST1H4GQ99525 98 aa4.97□□□□□ -1.61
MSH6-209ENST00000538136 C20orf78Q9BR46 151 aa4.97□□□□□ -1.61
MSH6-209ENST00000538136 DPM2O94777 84 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms