RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 IL17DQ8TAD2 202 aa10.29□□□□□ -0.76
USP44-203ENST00000537435 IGLV5-45A0A087WSX0 123 aa10.28□□□□□ -0.76
USP44-203ENST00000537435 DNAJC9-AS1A6NH13 148 aa10.28□□□□□ -0.76
USP44-203ENST00000537435 M0QXV9 152 aa10.28□□□□□ -0.76
USP44-203ENST00000537435 COX6A2Q02221 97 aa10.28□□□□□ -0.76
USP44-203ENST00000537435 LINC01620Q4KN68 170 aa10.28□□□□□ -0.76
USP44-203ENST00000537435 USP24Q9UPU5 2620 aa10.28□□□□□ -0.76
USP44-203ENST00000537435 TMEM101Q96IK0 257 aa10.28□□□□□ -0.76
USP44-203ENST00000537435 CCL24O00175 119 aa10.27□□□□□ -0.77
USP44-203ENST00000537435 LINC00694P0DN24 101 aa10.27□□□□□ -0.77
USP44-203ENST00000537435 MT-ATP8P03928 68 aa10.27□□□□□ -0.77
USP44-203ENST00000537435 XGP55808 180 aa10.27□□□□□ -0.77
USP44-203ENST00000537435 ICOSQ9Y6W8 199 aa10.27□□□□□ -0.77
USP44-203ENST00000537435 NDUFA1O15239 70 aa10.26□□□□□ -0.77
USP44-203ENST00000537435 Q6ZTI0 123 aa10.26□□□□□ -0.77
USP44-203ENST00000537435 DAND5Q8N907 189 aa10.26□□□□□ -0.77
USP44-203ENST00000537435 YAE1D1Q9NRH1 226 aa10.26□□□□□ -0.77
USP44-203ENST00000537435 UBR5O95071 2799 aaPredicted RBP10.26□□□□□ -0.77
USP44-203ENST00000537435 TLN2Q9Y4G6 2542 aa10.26□□□□□ -0.77
USP44-203ENST00000537435 TIMM17BO60830 172 aa10.26□□□□□ -0.77
USP44-203ENST00000537435 RPL36AP83881 106 aaKnown RBP10.26□□□□□ -0.77
USP44-203ENST00000537435 LINC00242Q5T6M2 205 aa10.26□□□□□ -0.77
USP44-203ENST00000537435 RPL36ALQ969Q0 106 aaKnown RBP10.26□□□□□ -0.77
USP44-203ENST00000537435 K7EQD1 137 aa10.25□□□□□ -0.77
USP44-203ENST00000537435 HERVK_113P63121 156 aa10.25□□□□□ -0.77
USP44-203ENST00000537435 ZNF469Q96JG9 3925 aaPredicted RBP10.25□□□□□ -0.77
USP44-203ENST00000537435 NDUFA7O95182 113 aa10.25□□□□□ -0.77
USP44-203ENST00000537435 WFDC11Q8NEX6 87 aa10.25□□□□□ -0.77
USP44-203ENST00000537435 NTN5Q8WTR8 489 aaPredicted RBP10.25□□□□□ -0.77
USP44-203ENST00000537435 ESM1Q9NQ30 184 aa10.25□□□□□ -0.77
USP44-203ENST00000537435 TRBV10-1A0A0K0K1A3 114 aa10.24□□□□□ -0.77
USP44-203ENST00000537435 IFITM1P13164 125 aa10.24□□□□□ -0.77
USP44-203ENST00000537435 NTM-AS1Q6ZSK4 140 aa10.24□□□□□ -0.77
USP44-203ENST00000537435 TRBV10-2A0A0K0K1G8 114 aa10.24□□□□□ -0.77
USP44-203ENST00000537435 RNF183Q96D59 192 aa10.24□□□□□ -0.77
USP44-203ENST00000537435 SONP18583 2426 aaKnown RBP10.24□□□□□ -0.77
USP44-203ENST00000537435 WNK1Q9H4A3 2382 aa10.23□□□□□ -0.77
USP44-203ENST00000537435 TRAV13-1A0A0B4J241 112 aa10.23□□□□□ -0.77
USP44-203ENST00000537435 TRAV4A0A0B4J268 109 aa10.23□□□□□ -0.77
USP44-203ENST00000537435 IGLV5-39A0A0G2JS06 123 aa10.23□□□□□ -0.77
USP44-203ENST00000537435 GAGE12JA6NER3 117 aa10.23□□□□□ -0.77
USP44-203ENST00000537435 GAGE4Q13068 117 aa10.23□□□□□ -0.77
USP44-203ENST00000537435 GAGE5Q13069 117 aa10.23□□□□□ -0.77
USP44-203ENST00000537435 CITED2Q99967 270 aaPredicted RBP10.23□□□□□ -0.77
USP44-203ENST00000537435 Q9H8V8 135 aa10.23□□□□□ -0.77
USP44-203ENST00000537435 A0A1B0GV72 72 aa10.23□□□□□ -0.77
USP44-203ENST00000537435 COX6CP09669 75 aa10.23□□□□□ -0.77
USP44-203ENST00000537435 DAZ2Q13117 558 aaKnown RBP10.23□□□□□ -0.77
USP44-203ENST00000537435 DAZ4Q86SG3 579 aaKnown RBP10.23□□□□□ -0.77
USP44-203ENST00000537435 NOP10Q9NPE3 64 aaKnown RBP10.23□□□□□ -0.77
USP44-203ENST00000537435 DAZ3Q9NR90 486 aaKnown RBP10.23□□□□□ -0.77
USP44-203ENST00000537435 AKAP9Q99996 3911 aa10.22□□□□□ -0.77
USP44-203ENST00000537435 TMEM262E9PQX1 116 aa10.22□□□□□ -0.77
USP44-203ENST00000537435 RPL13AP40429 203 aaKnown RBP10.22□□□□□ -0.77
USP44-203ENST00000537435 CIRBPQ14011 172 aaKnown RBP10.22□□□□□ -0.77
USP44-203ENST00000537435 ZNF625Q96I27 306 aaPredicted RBP10.22□□□□□ -0.77
USP44-203ENST00000537435 CSDC2Q9Y534 153 aaKnown RBP10.22□□□□□ -0.77
USP44-203ENST00000537435 EPG5Q9HCE0 2579 aa10.22□□□□□ -0.77
USP44-203ENST00000537435 CHD6Q8TD26 2715 aa10.22□□□□□ -0.77
USP44-203ENST00000537435 TEX29Q8N6K0 151 aa10.22□□□□□ -0.77
USP44-203ENST00000537435 SMIM1B2RUZ4 78 aa10.21□□□□□ -0.77
USP44-203ENST00000537435 CIDEAO60543 219 aa10.21□□□□□ -0.77
USP44-203ENST00000537435 FAM19A3Q7Z5A8 133 aa10.21□□□□□ -0.77
USP44-203ENST00000537435 LINC01600Q96MT4 127 aa10.21□□□□□ -0.77
USP44-203ENST00000537435 A0A0U1RRA0 63 aa10.21□□□□□ -0.78
USP44-203ENST00000537435 CLEC2BQ92478 149 aa10.21□□□□□ -0.78
USP44-203ENST00000537435 GIG44P09565 113 aaPredicted RBP10.2□□□□□ -0.78
USP44-203ENST00000537435 CKS1BP61024 79 aa10.2□□□□□ -0.78
USP44-203ENST00000537435 WFDC10AQ9H1F0 79 aa10.2□□□□□ -0.78
USP44-203ENST00000537435 CDC42SE2Q9NRR3 84 aa10.2□□□□□ -0.78
USP44-203ENST00000537435 TEX49A0A1B0GTD5 131 aa10.19□□□□□ -0.78
USP44-203ENST00000537435 C2orf82Q6UX34 121 aa10.19□□□□□ -0.78
USP44-203ENST00000537435 LINC00308Q8TCZ7 52 aa10.19□□□□□ -0.78
USP44-203ENST00000537435 H7C423 109 aa10.19□□□□□ -0.78
USP44-203ENST00000537435 APCP25054 2843 aa10.18□□□□□ -0.78
USP44-203ENST00000537435 PLAC8L1A1L4L8 177 aa10.17□□□□□ -0.78
USP44-203ENST00000537435 LST1O00453 97 aa10.17□□□□□ -0.78
USP44-203ENST00000537435 GAGE7O76087 117 aa10.17□□□□□ -0.78
USP44-203ENST00000537435 GAGE12FP0CL80 117 aa10.17□□□□□ -0.78
USP44-203ENST00000537435 GAGE12GP0CL81 117 aa10.17□□□□□ -0.78
USP44-203ENST00000537435 GAGE12IP0CL82 117 aa10.17□□□□□ -0.78
USP44-203ENST00000537435 RPL35AP18077 110 aaKnown RBP10.17□□□□□ -0.78
USP44-203ENST00000537435 LINC01006Q8NI28 216 aa10.17□□□□□ -0.78
USP44-203ENST00000537435 UBE2WQ96B02 151 aa10.17□□□□□ -0.78
USP44-203ENST00000537435 ITPR3Q14573 2671 aa10.17□□□□□ -0.78
USP44-203ENST00000537435 TRGV2A0A075B6R0 118 aa10.17□□□□□ -0.78
USP44-203ENST00000537435 UBE2L6O14933 153 aa10.17□□□□□ -0.78
USP44-203ENST00000537435 PRIMA1Q86XR5 153 aa10.17□□□□□ -0.78
USP44-203ENST00000537435 C16orf74Q96GX8 76 aa10.17□□□□□ -0.78
USP44-203ENST00000537435 LOC100131303A0A0U1RQF7 123 aa10.16□□□□□ -0.78
USP44-203ENST00000537435 F5H768 121 aa10.16□□□□□ -0.78
USP44-203ENST00000537435 MEIG1Q5JSS6 88 aa10.16□□□□□ -0.78
USP44-203ENST00000537435 SOSTDC1Q6X4U4 206 aa10.16□□□□□ -0.78
USP44-203ENST00000537435 TMEM243Q9BU79 118 aa10.16□□□□□ -0.78
USP44-203ENST00000537435 CUBNO60494 3623 aa10.16□□□□□ -0.78
USP44-203ENST00000537435 H3BT86 120 aa10.16□□□□□ -0.78
USP44-203ENST00000537435 CMC4P56277 68 aaPredicted RBP10.16□□□□□ -0.78
USP44-203ENST00000537435 NOTCH3Q9UM47 2321 aa10.16□□□□□ -0.78
USP44-203ENST00000537435 HIST2H2BCQ6DN03 193 aa10.15□□□□□ -0.78
USP44-203ENST00000537435 C19orf73Q9NVV2 129 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms