RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 SMIM2Q9BVW6 85 aa11.91□□□□□ -0.5
CCDC61-201ENST00000536603 A0A1B0GUV1 79 aa11.9□□□□□ -0.5
CCDC61-201ENST00000536603 VCYO14598 125 aa11.9□□□□□ -0.5
CCDC61-201ENST00000536603 XGP55808 180 aa11.9□□□□□ -0.5
CCDC61-201ENST00000536603 CLPSL2Q6UWE3 100 aa11.9□□□□□ -0.5
CCDC61-201ENST00000536603 C20orf203Q8NBC4 194 aa11.9□□□□□ -0.5
CCDC61-201ENST00000536603 C1orf43Q9BWL3 253 aa11.9□□□□□ -0.5
CCDC61-201ENST00000536603 HERC1Q15751 4861 aa11.89□□□□□ -0.51
CCDC61-201ENST00000536603 IGLV4-60A0A075B6I1 120 aa11.89□□□□□ -0.51
CCDC61-201ENST00000536603 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.89□□□□□ -0.51
CCDC61-201ENST00000536603 IGKV2-29A2NJV5 120 aaPredicted RBP11.89□□□□□ -0.51
CCDC61-201ENST00000536603 C18orf32Q8TCD1 76 aa11.89□□□□□ -0.51
CCDC61-201ENST00000536603 BAALCQ8WXS3 180 aa11.89□□□□□ -0.51
CCDC61-201ENST00000536603 MAP1LC3AQ9H492 121 aa11.89□□□□□ -0.51
CCDC61-201ENST00000536603 PRR34Q9NV39 138 aa11.89□□□□□ -0.51
CCDC61-201ENST00000536603 LECT2O14960 151 aa11.88□□□□□ -0.51
CCDC61-201ENST00000536603 IFI27P40305 119 aaPredicted RBP11.88□□□□□ -0.51
CCDC61-201ENST00000536603 WFDC2Q14508 124 aa11.88□□□□□ -0.51
CCDC61-201ENST00000536603 MIAQ16674 131 aa11.88□□□□□ -0.51
CCDC61-201ENST00000536603 TCAPO15273 167 aa11.87□□□□□ -0.51
CCDC61-201ENST00000536603 REG3AQ06141 175 aa11.87□□□□□ -0.51
CCDC61-201ENST00000536603 AMMECR1LQ6DCA0 310 aa11.87□□□□□ -0.51
CCDC61-201ENST00000536603 Q8N814 137 aa11.87□□□□□ -0.51
CCDC61-201ENST00000536603 Q8N8P6 123 aa11.87□□□□□ -0.51
CCDC61-201ENST00000536603 URB1-AS1Q96HZ7 61 aa11.87□□□□□ -0.51
CCDC61-201ENST00000536603 H7C423 109 aa11.86□□□□□ -0.51
CCDC61-201ENST00000536603 SMR3BP02814 79 aaPredicted RBP11.86□□□□□ -0.51
CCDC61-201ENST00000536603 FGF6P10767 208 aa11.85□□□□□ -0.51
CCDC61-201ENST00000536603 ESDP10768 282 aa11.85□□□□□ -0.51
CCDC61-201ENST00000536603 KRTAP10-1P60331 282 aa11.85□□□□□ -0.51
CCDC61-201ENST00000536603 RNASEKQ6P5S7 137 aaKnown RBP11.85□□□□□ -0.51
CCDC61-201ENST00000536603 IGLV10-54A0A075B6I4 117 aa11.84□□□□□ -0.51
CCDC61-201ENST00000536603 FCER1GP30273 86 aa11.84□□□□□ -0.51
CCDC61-201ENST00000536603 IGLV5-52A0A0A0MRZ9 124 aa11.83□□□□□ -0.52
CCDC61-201ENST00000536603 FAM229AH3BQW9 127 aa11.83□□□□□ -0.52
CCDC61-201ENST00000536603 NTN5Q8WTR8 489 aaPredicted RBP11.83□□□□□ -0.52
CCDC61-201ENST00000536603 KIR2DL4Q99706 377 aa11.83□□□□□ -0.52
CCDC61-201ENST00000536603 LINC01546A6NGU7 62 aa11.82□□□□□ -0.52
CCDC61-201ENST00000536603 HIST1H2BKO60814 126 aa11.82□□□□□ -0.52
CCDC61-201ENST00000536603 HIST1H2BJP06899 126 aa11.82□□□□□ -0.52
CCDC61-201ENST00000536603 GCSHP23434 173 aa11.82□□□□□ -0.52
CCDC61-201ENST00000536603 HIST1H2BOP23527 126 aa11.82□□□□□ -0.52
CCDC61-201ENST00000536603 HIST1H2BBP33778 126 aa11.82□□□□□ -0.52
CCDC61-201ENST00000536603 HIST1H2BDP58876 126 aa11.82□□□□□ -0.52
CCDC61-201ENST00000536603 HIST1H2BCP62807 126 aa11.82□□□□□ -0.52
CCDC61-201ENST00000536603 HIST2H2BEQ16778 126 aa11.82□□□□□ -0.52
CCDC61-201ENST00000536603 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.82□□□□□ -0.52
CCDC61-201ENST00000536603 PRSS3P2Q8NHM4 247 aa11.82□□□□□ -0.52
CCDC61-201ENST00000536603 HIST1H2BHQ93079 126 aa11.82□□□□□ -0.52
CCDC61-201ENST00000536603 HIST1H2BNQ99877 126 aa11.82□□□□□ -0.52
CCDC61-201ENST00000536603 HIST1H2BMQ99879 126 aa11.82□□□□□ -0.52
CCDC61-201ENST00000536603 NXT2Q9NPJ8 142 aaKnown RBP11.82□□□□□ -0.52
CCDC61-201ENST00000536603 DMBT1Q9UGM3 2413 aaPredicted RBP11.81□□□□□ -0.52
CCDC61-201ENST00000536603 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.81□□□□□ -0.52
CCDC61-201ENST00000536603 TRAV8-4A0A0B4J246 113 aa11.81□□□□□ -0.52
CCDC61-201ENST00000536603 IGKV3OR2-268A0A0C4DH90 116 aa11.81□□□□□ -0.52
CCDC61-201ENST00000536603 LINC00310P59036 64 aa11.81□□□□□ -0.52
CCDC61-201ENST00000536603 ZNF25P17030 456 aaPredicted RBP11.8□□□□□ -0.52
CCDC61-201ENST00000536603 KRTAP26-1Q6PEX3 210 aa11.8□□□□□ -0.52
CCDC61-201ENST00000536603 TMEM101Q96IK0 257 aa11.8□□□□□ -0.52
CCDC61-201ENST00000536603 HAMPP81172 84 aa11.79□□□□□ -0.52
CCDC61-201ENST00000536603 NUPR1O60356 82 aa11.78□□□□□ -0.52
CCDC61-201ENST00000536603 LINC00614P0C842 121 aa11.78□□□□□ -0.52
CCDC61-201ENST00000536603 RPL39P62891 51 aaKnown RBP11.78□□□□□ -0.52
CCDC61-201ENST00000536603 FA2HQ7L5A8 372 aa11.78□□□□□ -0.52
CCDC61-201ENST00000536603 OR5A1Q8NGJ0 315 aa11.78□□□□□ -0.52
CCDC61-201ENST00000536603 C1orf196B1AJZ1 125 aa11.77□□□□□ -0.53
CCDC61-201ENST00000536603 USP17L23D6RBM5 183 aa11.77□□□□□ -0.53
CCDC61-201ENST00000536603 J3QL48 77 aa11.77□□□□□ -0.53
CCDC61-201ENST00000536603 MRPL52Q86TS9 123 aaKnown RBP11.77□□□□□ -0.53
CCDC61-201ENST00000536603 BAGE3Q86Y29 109 aa11.77□□□□□ -0.53
CCDC61-201ENST00000536603 A0A096LNJ9 63 aa11.76□□□□□ -0.53
CCDC61-201ENST00000536603 PMCHL1Q16048 86 aa11.76□□□□□ -0.53
CCDC61-201ENST00000536603 C14orf177Q52M58 125 aa11.76□□□□□ -0.53
CCDC61-201ENST00000536603 DGAT2L7PQ6IED9 249 aa11.76□□□□□ -0.53
CCDC61-201ENST00000536603 K7EMI3 77 aa11.75□□□□□ -0.53
CCDC61-201ENST00000536603 SERF1AO75920 110 aa11.75□□□□□ -0.53
CCDC61-201ENST00000536603 ORMDL2Q53FV1 153 aa11.75□□□□□ -0.53
CCDC61-201ENST00000536603 FAM104AQ969W3 186 aa11.75□□□□□ -0.53
CCDC61-201ENST00000536603 TMEM18Q96B42 140 aa11.75□□□□□ -0.53
CCDC61-201ENST00000536603 CDC42SE2Q9NRR3 84 aa11.75□□□□□ -0.53
CCDC61-201ENST00000536603 AP5S1Q9NUS5 200 aa11.75□□□□□ -0.53
CCDC61-201ENST00000536603 UBE2D4Q9Y2X8 147 aa11.75□□□□□ -0.53
CCDC61-201ENST00000536603 ZNF664Q8N3J9 261 aa11.74□□□□□ -0.53
CCDC61-201ENST00000536603 CHCHD10Q8WYQ3 142 aaPredicted RBP11.74□□□□□ -0.53
CCDC61-201ENST00000536603 GAGE12HA6NDE8 117 aa11.73□□□□□ -0.53
CCDC61-201ENST00000536603 RAB5BP61020 215 aa11.73□□□□□ -0.53
CCDC61-201ENST00000536603 SMAGPQ0VAQ4 97 aa11.73□□□□□ -0.53
CCDC61-201ENST00000536603 C2orf66Q6UXQ4 117 aa11.73□□□□□ -0.53
CCDC61-201ENST00000536603 CHCHD1Q96BP2 118 aaKnown RBP11.73□□□□□ -0.53
CCDC61-201ENST00000536603 PRSS1P07477 247 aa11.72□□□□□ -0.53
CCDC61-201ENST00000536603 OPRPNQ99935 248 aaPredicted RBP11.72□□□□□ -0.53
CCDC61-201ENST00000536603 CSDC2Q9Y534 153 aaKnown RBP11.72□□□□□ -0.53
CCDC61-201ENST00000536603 LINC00959A0A1B0GUT2 108 aa11.71□□□□□ -0.53
CCDC61-201ENST00000536603 LINC01620Q4KN68 170 aa11.71□□□□□ -0.53
CCDC61-201ENST00000536603 FAM19A2Q8N3H0 131 aa11.71□□□□□ -0.53
CCDC61-201ENST00000536603 TOMM6Q96B49 74 aa11.71□□□□□ -0.53
CCDC61-201ENST00000536603 CYSLTR1Q9Y271 337 aa11.71□□□□□ -0.53
CCDC61-201ENST00000536603 VPS13BQ7Z7G8 4022 aa11.7□□□□□ -0.54
CCDC61-201ENST00000536603 SRRM2Q9UQ35 2752 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms