RNA–Protein interactions for RNA: ENST00000536337.5

PTPN21-202, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 3,943 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-202ENST00000536337 HERVK_113P63121 156 aa9.51□□□□□ -0.89
PTPN21-202ENST00000536337 GAGE2AQ6NT46 116 aa9.51□□□□□ -0.89
PTPN21-202ENST00000536337 C9orf85Q96MD7 179 aa9.51□□□□□ -0.89
PTPN21-202ENST00000536337 CITED2Q99967 270 aaPredicted RBP9.51□□□□□ -0.89
PTPN21-202ENST00000536337 CITED1Q99966 193 aa9.5□□□□□ -0.89
PTPN21-202ENST00000536337 SS18L2Q9UHA2 77 aa9.5□□□□□ -0.89
PTPN21-202ENST00000536337 IGHV3-33P01772 117 aa9.5□□□□□ -0.89
PTPN21-202ENST00000536337 CRIP2P52943 208 aaPredicted RBP9.5□□□□□ -0.89
PTPN21-202ENST00000536337 CFAP126Q5VTH2 177 aa9.5□□□□□ -0.89
PTPN21-202ENST00000536337 ITPR3Q14573 2671 aa9.5□□□□□ -0.89
PTPN21-202ENST00000536337 MALP21145 153 aa9.5□□□□□ -0.89
PTPN21-202ENST00000536337 VSIG2Q96IQ7 327 aa9.5□□□□□ -0.89
PTPN21-202ENST00000536337 SVEP1Q4LDE5 3571 aa9.5□□□□□ -0.89
PTPN21-202ENST00000536337 XCL1P47992 114 aa9.5□□□□□ -0.89
PTPN21-202ENST00000536337 WFDC10AQ9H1F0 79 aa9.5□□□□□ -0.89
PTPN21-202ENST00000536337 Q6YL49 198 aa9.49□□□□□ -0.89
PTPN21-202ENST00000536337 TRBV6-5A0A0K0K1A5 114 aa9.49□□□□□ -0.89
PTPN21-202ENST00000536337 SCGB1A1P11684 91 aa9.49□□□□□ -0.89
PTPN21-202ENST00000536337 CRYBA4P53673 196 aa9.49□□□□□ -0.89
PTPN21-202ENST00000536337 KIF25-AS1Q9Y6Z4 181 aa9.49□□□□□ -0.89
PTPN21-202ENST00000536337 DCHS2Q6V1P9 2916 aa9.49□□□□□ -0.89
PTPN21-202ENST00000536337 IGHV4-31P0DP07 118 aa9.49□□□□□ -0.89
PTPN21-202ENST00000536337 LINC00315P59091 139 aa9.49□□□□□ -0.89
PTPN21-202ENST00000536337 DEFB114Q30KQ6 69 aa9.49□□□□□ -0.89
PTPN21-202ENST00000536337 ZNF702PQ9H963 129 aa9.49□□□□□ -0.89
PTPN21-202ENST00000536337 CRYBG3Q68DQ2 2970 aa9.48□□□□□ -0.89
PTPN21-202ENST00000536337 B5MCH6 92 aa9.48□□□□□ -0.89
PTPN21-202ENST00000536337 TRIAP1O43715 76 aa9.48□□□□□ -0.89
PTPN21-202ENST00000536337 ZNF575Q86XF7 245 aa9.48□□□□□ -0.89
PTPN21-202ENST00000536337 WFDC11Q8NEX6 87 aa9.48□□□□□ -0.89
PTPN21-202ENST00000536337 DEFB4AO15263 64 aa9.48□□□□□ -0.89
PTPN21-202ENST00000536337 CFAP161Q6P656 301 aa9.48□□□□□ -0.89
PTPN21-202ENST00000536337 TEX15Q9BXT5 2789 aa9.48□□□□□ -0.89
PTPN21-202ENST00000536337 Q6ZSN1 163 aa9.47□□□□□ -0.89
PTPN21-202ENST00000536337 CRLF1O75462 422 aa9.47□□□□□ -0.89
PTPN21-202ENST00000536337 UBE2D1P51668 147 aa9.47□□□□□ -0.89
PTPN21-202ENST00000536337 C3orf56Q8N813 242 aa9.47□□□□□ -0.89
PTPN21-202ENST00000536337 IGLV10-54A0A075B6I4 117 aa9.46□□□□□ -0.9
PTPN21-202ENST00000536337 RBMY1BA6NDE4 496 aaKnown RBP9.46□□□□□ -0.9
PTPN21-202ENST00000536337 RBMY1EA6NEQ0 496 aaKnown RBP9.46□□□□□ -0.9
PTPN21-202ENST00000536337 RBMY1DP0C7P1 496 aaKnown RBP9.46□□□□□ -0.9
PTPN21-202ENST00000536337 RBMY1A1P0DJD3 496 aaKnown RBP9.46□□□□□ -0.9
PTPN21-202ENST00000536337 RBMY1CP0DJD4 496 aa9.46□□□□□ -0.9
PTPN21-202ENST00000536337 K7EQD1 137 aa9.46□□□□□ -0.9
PTPN21-202ENST00000536337 POM121L12Q8N7R1 296 aa9.46□□□□□ -0.9
PTPN21-202ENST00000536337 ODF3Q96PU9 254 aa9.46□□□□□ -0.9
PTPN21-202ENST00000536337 IGSF10Q6WRI0 2623 aa9.45□□□□□ -0.9
PTPN21-202ENST00000536337 XGP55808 180 aa9.45□□□□□ -0.9
PTPN21-202ENST00000536337 PIK3CD-AS1Q5SR53 167 aa9.45□□□□□ -0.9
PTPN21-202ENST00000536337 TMEM89A2RUT3 159 aa9.45□□□□□ -0.9
PTPN21-202ENST00000536337 BAALC-AS2P0C853 105 aa9.45□□□□□ -0.9
PTPN21-202ENST00000536337 TMEM86BQ8N661 226 aa9.45□□□□□ -0.9
PTPN21-202ENST00000536337 Q9HAA7 133 aa9.44□□□□□ -0.9
PTPN21-202ENST00000536337 MIAQ16674 131 aa9.44□□□□□ -0.9
PTPN21-202ENST00000536337 ADAMTSL4-AS1Q5T5F5 129 aa9.44□□□□□ -0.9
PTPN21-202ENST00000536337 HRNRQ86YZ3 2850 aaPredicted RBP9.44□□□□□ -0.9
PTPN21-202ENST00000536337 LINC01546A6NGU7 62 aa9.44□□□□□ -0.9
PTPN21-202ENST00000536337 RBMY1FQ15415 496 aaKnown RBP9.44□□□□□ -0.9
PTPN21-202ENST00000536337 C4orf3Q8WVX3 66 aa9.44□□□□□ -0.9
PTPN21-202ENST00000536337 TRBV10-2A0A0K0K1G8 114 aa9.43□□□□□ -0.9
PTPN21-202ENST00000536337 DNAJC30Q96LL9 226 aa9.43□□□□□ -0.9
PTPN21-202ENST00000536337 LOC100131303A0A0U1RQF7 123 aa9.43□□□□□ -0.9
PTPN21-202ENST00000536337 TINCRA0A1B0GVN0 87 aa9.43□□□□□ -0.9
PTPN21-202ENST00000536337 DNAJC9-AS1A6NH13 148 aa9.43□□□□□ -0.9
PTPN21-202ENST00000536337 IFITM1P13164 125 aa9.43□□□□□ -0.9
PTPN21-202ENST00000536337 RPL32P62910 135 aaKnown RBP9.43□□□□□ -0.9
PTPN21-202ENST00000536337 MIR7-3HGQ8N6C7 128 aa9.42□□□□□ -0.9
PTPN21-202ENST00000536337 RNF183Q96D59 192 aa9.42□□□□□ -0.9
PTPN21-202ENST00000536337 SND1-IT1Q9HBX3 110 aa9.42□□□□□ -0.9
PTPN21-202ENST00000536337 A0A0B4J2C4 111 aa9.42□□□□□ -0.9
PTPN21-202ENST00000536337 SMIM20Q8N5G0 67 aa9.42□□□□□ -0.9
PTPN21-202ENST00000536337 SVIPQ8NHG7 77 aa9.42□□□□□ -0.9
PTPN21-202ENST00000536337 USP24Q9UPU5 2620 aa9.42□□□□□ -0.9
PTPN21-202ENST00000536337 NBEAL2Q6ZNJ1 2754 aa9.42□□□□□ -0.9
PTPN21-202ENST00000536337 UBE2D4Q9Y2X8 147 aa9.42□□□□□ -0.9
PTPN21-202ENST00000536337 S100A7L2Q5SY68 101 aa9.41□□□□□ -0.9
PTPN21-202ENST00000536337 SS18Q15532 418 aa9.41□□□□□ -0.9
PTPN21-202ENST00000536337 PLA2G2AP14555 144 aa9.41□□□□□ -0.9
PTPN21-202ENST00000536337 GYPEP15421 78 aa9.41□□□□□ -0.9
PTPN21-202ENST00000536337 HIST1H4AP62805 103 aaKnown RBP9.41□□□□□ -0.9
PTPN21-202ENST00000536337 DAZ2Q13117 558 aaKnown RBP9.41□□□□□ -0.9
PTPN21-202ENST00000536337 DAZ4Q86SG3 579 aaKnown RBP9.41□□□□□ -0.9
PTPN21-202ENST00000536337 ATP6V0E2Q8NHE4 81 aa9.41□□□□□ -0.9
PTPN21-202ENST00000536337 TMEM263Q8WUH6 116 aaKnown RBP9.41□□□□□ -0.9
PTPN21-202ENST00000536337 DAZ3Q9NR90 486 aaKnown RBP9.41□□□□□ -0.9
PTPN21-202ENST00000536337 F5H768 121 aa9.4□□□□□ -0.9
PTPN21-202ENST00000536337 ANGP03950 147 aaKnown RBP9.4□□□□□ -0.9
PTPN21-202ENST00000536337 ATP5G1P05496 136 aa9.4□□□□□ -0.9
PTPN21-202ENST00000536337 LINC00694P0DN24 101 aa9.4□□□□□ -0.91
PTPN21-202ENST00000536337 SMCPP49901 116 aaPredicted RBP9.4□□□□□ -0.91
PTPN21-202ENST00000536337 UTP20O75691 2785 aaKnown RBP9.4□□□□□ -0.91
PTPN21-202ENST00000536337 CMC4P56277 68 aaPredicted RBP9.39□□□□□ -0.91
PTPN21-202ENST00000536337 UBE2D3P61077 147 aa9.39□□□□□ -0.91
PTPN21-202ENST00000536337 UBE2D2P62837 147 aa9.39□□□□□ -0.91
PTPN21-202ENST00000536337 FAM19A4Q96LR4 140 aa9.39□□□□□ -0.91
PTPN21-202ENST00000536337 COX6A2Q02221 97 aa9.39□□□□□ -0.91
PTPN21-202ENST00000536337 SPATA25Q9BR10 227 aa9.39□□□□□ -0.91
PTPN21-202ENST00000536337 CELSR1Q9NYQ6 3014 aa9.39□□□□□ -0.91
PTPN21-202ENST00000536337 MRPS36P82909 103 aaKnown RBP9.38□□□□□ -0.91
PTPN21-202ENST00000536337 ODF3L2Q3SX64 289 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms