RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 NTM-AS1Q6ZSK4 140 aa4.93□□□□□ -1.62
CPSF7-215ENST00000536145 LINC01561Q8N1V8 128 aa4.93□□□□□ -1.62
CPSF7-215ENST00000536145 LINC00337Q8N6G1 96 aa4.93□□□□□ -1.62
CPSF7-215ENST00000536145 OR13C6PQ8NH95 151 aa4.93□□□□□ -1.62
CPSF7-215ENST00000536145 KIR2DL5BQ8NHK3 375 aa4.93□□□□□ -1.62
CPSF7-215ENST00000536145 LINC00167Q96N53 147 aa4.93□□□□□ -1.62
CPSF7-215ENST00000536145 Q9HAA7 133 aa4.93□□□□□ -1.62
CPSF7-215ENST00000536145 UBTD1Q9HAC8 227 aa4.93□□□□□ -1.62
CPSF7-215ENST00000536145 LINC00846Q9NV44 126 aa4.93□□□□□ -1.62
CPSF7-215ENST00000536145 A0A087WYN8 130 aa4.92□□□□□ -1.62
CPSF7-215ENST00000536145 SMIM11BQ8TCY0 68 aa4.92□□□□□ -1.62
CPSF7-215ENST00000536145 CDC42SE2Q9NRR3 84 aa4.92□□□□□ -1.62
CPSF7-215ENST00000536145 APC2O95996 2303 aa4.92□□□□□ -1.62
CPSF7-215ENST00000536145 ASPMQ8IZT6 3477 aa4.92□□□□□ -1.62
CPSF7-215ENST00000536145 IGHV4-61A0A0C4DH41 118 aa4.91□□□□□ -1.62
CPSF7-215ENST00000536145 IGKV3D-7A0A0C4DH55 119 aa4.91□□□□□ -1.62
CPSF7-215ENST00000536145 A0A0U1RRA0 63 aa4.91□□□□□ -1.62
CPSF7-215ENST00000536145 NDUFC2-KCTD14E9PQ53 114 aa4.91□□□□□ -1.62
CPSF7-215ENST00000536145 H0YGX0 51 aa4.91□□□□□ -1.62
CPSF7-215ENST00000536145 PRM2P04554 102 aa4.91□□□□□ -1.62
CPSF7-215ENST00000536145 SS18Q15532 418 aa4.91□□□□□ -1.62
CPSF7-215ENST00000536145 C10orf99Q6UWK7 81 aa4.91□□□□□ -1.62
CPSF7-215ENST00000536145 LYPD5Q6UWN5 251 aa4.91□□□□□ -1.62
CPSF7-215ENST00000536145 ACACAQ13085 2346 aa4.91□□□□□ -1.62
CPSF7-215ENST00000536145 ABCA4P78363 2273 aa4.9□□□□□ -1.62
CPSF7-215ENST00000536145 TRAV13-1A0A0B4J241 112 aa4.9□□□□□ -1.63
CPSF7-215ENST00000536145 USP17L23D6RBM5 183 aa4.9□□□□□ -1.63
CPSF7-215ENST00000536145 LY6G6DO95868 133 aa4.9□□□□□ -1.63
CPSF7-215ENST00000536145 CRPP02741 224 aa4.9□□□□□ -1.63
CPSF7-215ENST00000536145 DEFB131AP59861 70 aa4.9□□□□□ -1.63
CPSF7-215ENST00000536145 FREM2Q5SZK8 3169 aa4.9□□□□□ -1.63
CPSF7-215ENST00000536145 NCOR2Q9Y618 2525 aa4.89□□□□□ -1.63
CPSF7-215ENST00000536145 TRAV25A0A0B4J276 109 aa4.89□□□□□ -1.63
CPSF7-215ENST00000536145 TRBV10-1A0A0K0K1A3 114 aa4.89□□□□□ -1.63
CPSF7-215ENST00000536145 CCKP06307 115 aa4.89□□□□□ -1.63
CPSF7-215ENST00000536145 HOXD3P31249 432 aaPredicted RBP4.89□□□□□ -1.63
CPSF7-215ENST00000536145 CCL18P55774 89 aa4.89□□□□□ -1.63
CPSF7-215ENST00000536145 SYNJ2BPP57105 145 aa4.89□□□□□ -1.63
CPSF7-215ENST00000536145 DGAT2L7PQ6IED9 249 aa4.89□□□□□ -1.63
CPSF7-215ENST00000536145 MIR7-3HGQ8N6C7 128 aa4.89□□□□□ -1.63
CPSF7-215ENST00000536145 C10orf105Q8TEF2 133 aa4.89□□□□□ -1.63
CPSF7-215ENST00000536145 BBC3Q96PG8 261 aaPredicted RBP4.89□□□□□ -1.63
CPSF7-215ENST00000536145 SND1-IT1Q9HBX3 110 aa4.89□□□□□ -1.63
CPSF7-215ENST00000536145 C14orf132Q9NPU4 83 aa4.89□□□□□ -1.63
CPSF7-215ENST00000536145 SPTBN4Q9H254 2564 aa4.89□□□□□ -1.63
CPSF7-215ENST00000536145 A0A087WVE0 104 aa4.88□□□□□ -1.63
CPSF7-215ENST00000536145 BCE1O60756 84 aa4.88□□□□□ -1.63
CPSF7-215ENST00000536145 DNAL4O96015 105 aa4.88□□□□□ -1.63
CPSF7-215ENST00000536145 AVPP01185 164 aa4.88□□□□□ -1.63
CPSF7-215ENST00000536145 PRB1P04280 392 aa4.88□□□□□ -1.63
CPSF7-215ENST00000536145 COX7B2Q8TF08 81 aa4.88□□□□□ -1.63
CPSF7-215ENST00000536145 ZFHX4Q86UP3 3567 aa4.88□□□□□ -1.63
CPSF7-215ENST00000536145 LAMA5O15230 3695 aa4.87□□□□□ -1.63
CPSF7-215ENST00000536145 TRBV10-3A0A0K0K1G6 114 aa4.87□□□□□ -1.63
CPSF7-215ENST00000536145 NDUFC2O95298 119 aa4.87□□□□□ -1.63
CPSF7-215ENST00000536145 FHL2Q14192 279 aa4.87□□□□□ -1.63
CPSF7-215ENST00000536145 ATP5EP2Q5VTU8 51 aa4.87□□□□□ -1.63
CPSF7-215ENST00000536145 C1orf158Q8N1D5 194 aa4.87□□□□□ -1.63
CPSF7-215ENST00000536145 ZNF843Q8N446 348 aa4.87□□□□□ -1.63
CPSF7-215ENST00000536145 DSCR8Q96T75 97 aa4.87□□□□□ -1.63
CPSF7-215ENST00000536145 KRTAP3-3Q9BYR6 98 aa4.87□□□□□ -1.63
CPSF7-215ENST00000536145 KRTAP3-2Q9BYR7 98 aa4.87□□□□□ -1.63
CPSF7-215ENST00000536145 MAP6D1Q9H9H5 199 aa4.87□□□□□ -1.63
CPSF7-215ENST00000536145 PTPRQQ9UMZ3 2332 aa4.87□□□□□ -1.63
CPSF7-215ENST00000536145 FRYQ5TBA9 3013 aa4.87□□□□□ -1.63
CPSF7-215ENST00000536145 WNK2Q9Y3S1 2297 aa4.86□□□□□ -1.63
CPSF7-215ENST00000536145 AKAP13Q12802 2813 aa4.86□□□□□ -1.63
CPSF7-215ENST00000536145 NBEAQ8NFP9 2946 aa4.86□□□□□ -1.63
CPSF7-215ENST00000536145 TRBV6-4A0A1B0GX49 114 aa4.86□□□□□ -1.63
CPSF7-215ENST00000536145 IBA57-AS1B1ANH7 110 aa4.86□□□□□ -1.63
CPSF7-215ENST00000536145 K7EQD1 137 aa4.86□□□□□ -1.63
CPSF7-215ENST00000536145 NCR3O14931 201 aa4.86□□□□□ -1.63
CPSF7-215ENST00000536145 LECT2O14960 151 aa4.86□□□□□ -1.63
CPSF7-215ENST00000536145 NANOS2P60321 138 aaKnown RBP4.86□□□□□ -1.63
CPSF7-215ENST00000536145 RPL36AP83881 106 aaKnown RBP4.86□□□□□ -1.63
CPSF7-215ENST00000536145 RPL36ALQ969Q0 106 aaKnown RBP4.86□□□□□ -1.63
CPSF7-215ENST00000536145 UBE2E2Q96LR5 201 aa4.86□□□□□ -1.63
CPSF7-215ENST00000536145 CACNA1BQ00975 2339 aa4.86□□□□□ -1.63
CPSF7-215ENST00000536145 MED13LQ71F56 2210 aa4.85□□□□□ -1.63
CPSF7-215ENST00000536145 IGHV3OR16-9A0A0B4J2B5 98 aa4.85□□□□□ -1.63
CPSF7-215ENST00000536145 C19orf84I3L1E1 186 aa4.85□□□□□ -1.63
CPSF7-215ENST00000536145 INSP01308 110 aa4.85□□□□□ -1.63
CPSF7-215ENST00000536145 IGHV4-59P01825 116 aa4.85□□□□□ -1.63
CPSF7-215ENST00000536145 MSMBP08118 114 aa4.85□□□□□ -1.63
CPSF7-215ENST00000536145 HTN1P15515 57 aa4.85□□□□□ -1.63
CPSF7-215ENST00000536145 GNLYP22749 145 aa4.85□□□□□ -1.63
CPSF7-215ENST00000536145 HILS1P60008 231 aa4.85□□□□□ -1.63
CPSF7-215ENST00000536145 C4orf26Q17RF5 130 aa4.85□□□□□ -1.63
CPSF7-215ENST00000536145 DEFB112Q30KQ8 113 aa4.85□□□□□ -1.63
CPSF7-215ENST00000536145 S100A7L2Q5SY68 101 aa4.85□□□□□ -1.63
CPSF7-215ENST00000536145 TMEM243Q9BU79 118 aa4.85□□□□□ -1.63
CPSF7-215ENST00000536145 ZNF702PQ9H963 129 aa4.85□□□□□ -1.63
CPSF7-215ENST00000536145 ZZEF1O43149 2961 aa4.85□□□□□ -1.63
CPSF7-215ENST00000536145 LOC400499M0QZD8 3231 aa4.84□□□□□ -1.63
CPSF7-215ENST00000536145 CACNA1AO00555 2505 aa4.84□□□□□ -1.63
CPSF7-215ENST00000536145 A0A096LNT2 108 aa4.84□□□□□ -1.63
CPSF7-215ENST00000536145 GHRHP01286 108 aa4.84□□□□□ -1.63
CPSF7-215ENST00000536145 SLPIP03973 132 aa4.84□□□□□ -1.63
CPSF7-215ENST00000536145 ORMDL1Q9P0S3 153 aa4.84□□□□□ -1.63
CPSF7-215ENST00000536145 PCNX1Q96RV3 2341 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms