RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 LRP1BQ9NZR2 4599 aa8.74□□□□□ -1.01
CHFR-210ENST00000535527 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.73□□□□□ -1.01
CHFR-210ENST00000535527 TRBV27A0A0K0K1C4 114 aa8.73□□□□□ -1.01
CHFR-210ENST00000535527 IGKV2-29A2NJV5 120 aaPredicted RBP8.73□□□□□ -1.01
CHFR-210ENST00000535527 DLEU1O43261 78 aa8.73□□□□□ -1.01
CHFR-210ENST00000535527 TNFRSF6BO95407 300 aa8.73□□□□□ -1.01
CHFR-210ENST00000535527 FUSP35637 526 aaKnown RBP eCLIP8.73□□□□□ -1.01
CHFR-210ENST00000535527 SUMO2P61956 95 aaKnown RBP8.73□□□□□ -1.01
CHFR-210ENST00000535527 RBX1P62877 108 aa8.73□□□□□ -1.01
CHFR-210ENST00000535527 Q0VG73 95 aa8.73□□□□□ -1.01
CHFR-210ENST00000535527 ENHOQ6UWT2 76 aa8.73□□□□□ -1.01
CHFR-210ENST00000535527 Q8N1X5 172 aa8.73□□□□□ -1.01
CHFR-210ENST00000535527 ST20Q9HBF5 79 aa8.73□□□□□ -1.01
CHFR-210ENST00000535527 KLK12Q9UKR0 248 aa8.73□□□□□ -1.01
CHFR-210ENST00000535527 TRBV25-1A0A075B6N4 114 aa8.72□□□□□ -1.01
CHFR-210ENST00000535527 CKS2P33552 79 aa8.72□□□□□ -1.01
CHFR-210ENST00000535527 AMTP48728 403 aa8.72□□□□□ -1.01
CHFR-210ENST00000535527 COTL1Q14019 142 aa8.72□□□□□ -1.01
CHFR-210ENST00000535527 KIAA1644Q3SXP7 199 aa8.72□□□□□ -1.01
CHFR-210ENST00000535527 CLPSL2Q6UWE3 100 aa8.72□□□□□ -1.01
CHFR-210ENST00000535527 TMEM243Q9BU79 118 aa8.72□□□□□ -1.01
CHFR-210ENST00000535527 VAMP8Q9BV40 100 aa8.72□□□□□ -1.01
CHFR-210ENST00000535527 C16orf90A8MZG2 172 aa8.71□□□□□ -1.02
CHFR-210ENST00000535527 I3L3M4 83 aa8.71□□□□□ -1.02
CHFR-210ENST00000535527 ZNF25P17030 456 aaPredicted RBP8.71□□□□□ -1.02
CHFR-210ENST00000535527 KRTAP26-1Q6PEX3 210 aa8.71□□□□□ -1.02
CHFR-210ENST00000535527 TEX43Q6ZNM6 134 aa8.71□□□□□ -1.02
CHFR-210ENST00000535527 FAM104AQ969W3 186 aa8.71□□□□□ -1.02
CHFR-210ENST00000535527 SMIM2Q9BVW6 85 aa8.71□□□□□ -1.02
CHFR-210ENST00000535527 LRCOL1A6NCL2 159 aa8.7□□□□□ -1.02
CHFR-210ENST00000535527 KRTAP10-2P60368 255 aa8.7□□□□□ -1.02
CHFR-210ENST00000535527 LAGE3Q14657 143 aa8.7□□□□□ -1.02
CHFR-210ENST00000535527 PMCHL1Q16048 86 aa8.7□□□□□ -1.02
CHFR-210ENST00000535527 TMEM97Q5BJF2 176 aa8.7□□□□□ -1.02
CHFR-210ENST00000535527 PRELID3AQ96N28 172 aa8.7□□□□□ -1.02
CHFR-210ENST00000535527 SNHG12Q9BXW3 62 aa8.7□□□□□ -1.02
CHFR-210ENST00000535527 GNB1LQ9BYB4 327 aa8.7□□□□□ -1.02
CHFR-210ENST00000535527 APCSP02743 223 aa8.69□□□□□ -1.02
CHFR-210ENST00000535527 PMCHP20382 165 aa8.69□□□□□ -1.02
CHFR-210ENST00000535527 RPL32P62910 135 aaKnown RBP8.69□□□□□ -1.02
CHFR-210ENST00000535527 CDPF1Q6NVV7 123 aa8.69□□□□□ -1.02
CHFR-210ENST00000535527 ORMDL3Q8N138 153 aa8.69□□□□□ -1.02
CHFR-210ENST00000535527 C10orf126Q8N4M7 172 aa8.69□□□□□ -1.02
CHFR-210ENST00000535527 PRR34Q9NV39 138 aa8.69□□□□□ -1.02
CHFR-210ENST00000535527 UQCR10Q9UDW1 63 aa8.69□□□□□ -1.02
CHFR-210ENST00000535527 APOBP04114 4563 aaKnown RBP8.69□□□□□ -1.02
CHFR-210ENST00000535527 A0A087WX48 190 aa8.68□□□□□ -1.02
CHFR-210ENST00000535527 TMEM262E9PQX1 116 aa8.68□□□□□ -1.02
CHFR-210ENST00000535527 K7EP13 123 aa8.68□□□□□ -1.02
CHFR-210ENST00000535527 UBE2WQ96B02 151 aa8.68□□□□□ -1.02
CHFR-210ENST00000535527 C20orf78Q9BR46 151 aa8.68□□□□□ -1.02
CHFR-210ENST00000535527 TRAV9-2A0A087WT02 112 aa8.67□□□□□ -1.02
CHFR-210ENST00000535527 A0A087WTM6 91 aa8.67□□□□□ -1.02
CHFR-210ENST00000535527 ANGP03950 147 aaKnown RBP8.67□□□□□ -1.02
CHFR-210ENST00000535527 FGF6P10767 208 aa8.67□□□□□ -1.02
CHFR-210ENST00000535527 BAGE3Q86Y29 109 aa8.67□□□□□ -1.02
CHFR-210ENST00000535527 LINC00269Q8N2A0 174 aa8.67□□□□□ -1.02
CHFR-210ENST00000535527 ORAOV1Q8WV07 137 aa8.67□□□□□ -1.02
CHFR-210ENST00000535527 DNAH8Q96JB1 4490 aa8.67□□□□□ -1.02
CHFR-210ENST00000535527 DMBT1Q9UGM3 2413 aaPredicted RBP8.66□□□□□ -1.02
CHFR-210ENST00000535527 A0A1B0GUV1 79 aa8.66□□□□□ -1.02
CHFR-210ENST00000535527 PRSS47A8MTI9 375 aa8.66□□□□□ -1.02
CHFR-210ENST00000535527 VCYO14598 125 aa8.66□□□□□ -1.02
CHFR-210ENST00000535527 HLA-DQA1P01909 254 aa8.66□□□□□ -1.02
CHFR-210ENST00000535527 PPBPP02775 128 aa8.66□□□□□ -1.02
CHFR-210ENST00000535527 RPL39P62891 51 aaKnown RBP8.66□□□□□ -1.02
CHFR-210ENST00000535527 LOC389332A0A1B0GUA5 103 aa8.65□□□□□ -1.02
CHFR-210ENST00000535527 LECT2O14960 151 aa8.65□□□□□ -1.02
CHFR-210ENST00000535527 MRPL18Q9H0U6 180 aaKnown RBP8.65□□□□□ -1.02
CHFR-210ENST00000535527 UBE2D4Q9Y2X8 147 aa8.65□□□□□ -1.02
CHFR-210ENST00000535527 IGLV10-54A0A075B6I4 117 aa8.64□□□□□ -1.03
CHFR-210ENST00000535527 EREGO14944 169 aa8.64□□□□□ -1.03
CHFR-210ENST00000535527 REG3AQ06141 175 aa8.64□□□□□ -1.03
CHFR-210ENST00000535527 RNASE13Q5GAN3 156 aaKnown RBP8.64□□□□□ -1.03
CHFR-210ENST00000535527 Q6ZUT4 128 aa8.64□□□□□ -1.03
CHFR-210ENST00000535527 URB1-AS1Q96HZ7 61 aa8.64□□□□□ -1.03
CHFR-210ENST00000535527 ALKBH7Q9BT30 221 aaPredicted RBP8.64□□□□□ -1.03
CHFR-210ENST00000535527 IGKV2D-24A0A075B6R9 120 aa8.63□□□□□ -1.03
CHFR-210ENST00000535527 PPP1R17O96001 155 aa8.63□□□□□ -1.03
CHFR-210ENST00000535527 SPATA12Q7Z6I5 190 aa8.63□□□□□ -1.03
CHFR-210ENST00000535527 NFE4Q86UQ8 179 aa8.63□□□□□ -1.03
CHFR-210ENST00000535527 OPRPNQ99935 248 aaPredicted RBP8.63□□□□□ -1.03
CHFR-210ENST00000535527 TRAV8-3A0A0A6YYJ7 113 aa8.62□□□□□ -1.03
CHFR-210ENST00000535527 UBE2L6O14933 153 aa8.62□□□□□ -1.03
CHFR-210ENST00000535527 G0S2P27469 103 aa8.62□□□□□ -1.03
CHFR-210ENST00000535527 FCER1GP30273 86 aa8.62□□□□□ -1.03
CHFR-210ENST00000535527 IFI27P40305 119 aaPredicted RBP8.62□□□□□ -1.03
CHFR-210ENST00000535527 RNASEKQ6P5S7 137 aaKnown RBP8.62□□□□□ -1.03
CHFR-210ENST00000535527 Q8N8P6 123 aa8.62□□□□□ -1.03
CHFR-210ENST00000535527 BAALCQ8WXS3 180 aa8.62□□□□□ -1.03
CHFR-210ENST00000535527 MAP1LC3AQ9H492 121 aa8.62□□□□□ -1.03
CHFR-210ENST00000535527 LAMTOR2Q9Y2Q5 125 aa8.62□□□□□ -1.03
CHFR-210ENST00000535527 IGKV3OR2-268A0A0C4DH90 116 aa8.61□□□□□ -1.03
CHFR-210ENST00000535527 H7C423 109 aa8.61□□□□□ -1.03
CHFR-210ENST00000535527 HNRNPA3P51991 378 aaKnown RBP8.61□□□□□ -1.03
CHFR-210ENST00000535527 KIR2DL4Q99706 377 aa8.61□□□□□ -1.03
CHFR-210ENST00000535527 CDC42SE2Q9NRR3 84 aa8.61□□□□□ -1.03
CHFR-210ENST00000535527 CRPP02741 224 aa8.6□□□□□ -1.03
CHFR-210ENST00000535527 MIAQ16674 131 aa8.6□□□□□ -1.03
CHFR-210ENST00000535527 NTN5Q8WTR8 489 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms