RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 RETNQ9HD89 108 aa8.82□□□□□ -1
SCARB1-204ENST00000535005 TENM3Q9P273 2699 aa8.81□□□□□ -1
SCARB1-204ENST00000535005 C2orf66Q6UXQ4 117 aa8.81□□□□□ -1
SCARB1-204ENST00000535005 Q8NAQ8 132 aa8.81□□□□□ -1
SCARB1-204ENST00000535005 TMEM141Q96I45 108 aa8.81□□□□□ -1
SCARB1-204ENST00000535005 PLAC8L1A1L4L8 177 aa8.8□□□□□ -1
SCARB1-204ENST00000535005 RNASE3P12724 160 aaKnown RBP8.8□□□□□ -1
SCARB1-204ENST00000535005 PSMB2P49721 201 aa8.8□□□□□ -1
SCARB1-204ENST00000535005 ZNF415Q09FC8 603 aa8.8□□□□□ -1
SCARB1-204ENST00000535005 NFE4Q86UQ8 179 aa8.8□□□□□ -1
SCARB1-204ENST00000535005 MDFICQ9P1T7 246 aa8.8□□□□□ -1
SCARB1-204ENST00000535005 HUWE1Q7Z6Z7 4374 aaKnown RBP8.8□□□□□ -1
SCARB1-204ENST00000535005 IGHV4-28A0A0C4DH34 117 aa8.8□□□□□ -1
SCARB1-204ENST00000535005 PRSS29PA6NIE9 313 aa8.8□□□□□ -1
SCARB1-204ENST00000535005 IL17DQ8TAD2 202 aa8.8□□□□□ -1
SCARB1-204ENST00000535005 RASL10AQ92737 203 aa8.8□□□□□ -1
SCARB1-204ENST00000535005 C9orf85Q96MD7 179 aa8.8□□□□□ -1
SCARB1-204ENST00000535005 TRAV26-2A0A0B4J265 109 aa8.79□□□□□ -1
SCARB1-204ENST00000535005 LOC107984156A0A0G2JMH3 177 aa8.79□□□□□ -1
SCARB1-204ENST00000535005 S100A4P26447 101 aaKnown RBP8.79□□□□□ -1
SCARB1-204ENST00000535005 XGP55808 180 aa8.79□□□□□ -1
SCARB1-204ENST00000535005 DAZ2Q13117 558 aaKnown RBP8.79□□□□□ -1
SCARB1-204ENST00000535005 ARL17AQ8IVW1 177 aa8.79□□□□□ -1
SCARB1-204ENST00000535005 C10orf126Q8N4M7 172 aa8.79□□□□□ -1
SCARB1-204ENST00000535005 PTH2Q96A98 100 aa8.79□□□□□ -1
SCARB1-204ENST00000535005 SPXQ9BT56 116 aa8.79□□□□□ -1
SCARB1-204ENST00000535005 A0A0J9YY99 117 aa8.78□□□□□ -1
SCARB1-204ENST00000535005 C11orf86A6NJI1 115 aa8.78□□□□□ -1
SCARB1-204ENST00000535005 NXPH4O95158 308 aa8.78□□□□□ -1
SCARB1-204ENST00000535005 MT-ATP8P03928 68 aa8.78□□□□□ -1
SCARB1-204ENST00000535005 ZFAND6Q6FIF0 208 aa8.78□□□□□ -1
SCARB1-204ENST00000535005 TIMM17AQ99595 171 aa8.78□□□□□ -1
SCARB1-204ENST00000535005 C11orf68Q9H3H3 251 aaKnown RBP8.78□□□□□ -1
SCARB1-204ENST00000535005 H3BVH4 76 aa8.77□□□□□ -1
SCARB1-204ENST00000535005 SLC25A29Q8N8R3 303 aa8.77□□□□□ -1
SCARB1-204ENST00000535005 CARD19Q96LW7 228 aa8.77□□□□□ -1
SCARB1-204ENST00000535005 P0DMU3 169 aa8.77□□□□□ -1.01
SCARB1-204ENST00000535005 FAM231AP0DMU4 169 aa8.77□□□□□ -1.01
SCARB1-204ENST00000535005 FAM231CP0DMU5 169 aa8.77□□□□□ -1.01
SCARB1-204ENST00000535005 PMVKQ15126 192 aa8.77□□□□□ -1.01
SCARB1-204ENST00000535005 Q6Q795 121 aa8.77□□□□□ -1.01
SCARB1-204ENST00000535005 PRO1854Q9UHT4 67 aa8.77□□□□□ -1.01
SCARB1-204ENST00000535005 COL7A1Q02388 2944 aa8.77□□□□□ -1.01
SCARB1-204ENST00000535005 PIK3CD-AS1Q5SR53 167 aa8.76□□□□□ -1.01
SCARB1-204ENST00000535005 ANAPC13Q9BS18 74 aa8.76□□□□□ -1.01
SCARB1-204ENST00000535005 STAB2Q8WWQ8 2551 aa8.76□□□□□ -1.01
SCARB1-204ENST00000535005 A0A0B4J2C4 111 aa8.75□□□□□ -1.01
SCARB1-204ENST00000535005 LYRM9A8MSI8 78 aa8.75□□□□□ -1.01
SCARB1-204ENST00000535005 M0R2P5 195 aa8.75□□□□□ -1.01
SCARB1-204ENST00000535005 TCL1BO95988 128 aa8.75□□□□□ -1.01
SCARB1-204ENST00000535005 IGHV3-30P01768 117 aa8.75□□□□□ -1.01
SCARB1-204ENST00000535005 SCGB1C2P0DMR2 95 aa8.75□□□□□ -1.01
SCARB1-204ENST00000535005 IGHV3-30-5P0DP03 117 aa8.75□□□□□ -1.01
SCARB1-204ENST00000535005 GAGE5Q13069 117 aa8.75□□□□□ -1.01
SCARB1-204ENST00000535005 GAGE6Q13070 117 aa8.75□□□□□ -1.01
SCARB1-204ENST00000535005 PLEKHB2Q96CS7 222 aa8.75□□□□□ -1.01
SCARB1-204ENST00000535005 NOP10Q9NPE3 64 aaKnown RBP8.75□□□□□ -1.01
SCARB1-204ENST00000535005 IGLV4-69A0A075B6H9 119 aa8.75□□□□□ -1.01
SCARB1-204ENST00000535005 ZFP2Q6ZN57 461 aa8.75□□□□□ -1.01
SCARB1-204ENST00000535005 LINC00612Q8N6U2 182 aa8.75□□□□□ -1.01
SCARB1-204ENST00000535005 PHLDA3Q9Y5J5 127 aa8.75□□□□□ -1.01
SCARB1-204ENST00000535005 IGIPA6NJ69 53 aa8.74□□□□□ -1.01
SCARB1-204ENST00000535005 DEFB4AO15263 64 aa8.74□□□□□ -1.01
SCARB1-204ENST00000535005 CFC1BP0CG36 223 aa8.74□□□□□ -1.01
SCARB1-204ENST00000535005 CFC1P0CG37 223 aa8.74□□□□□ -1.01
SCARB1-204ENST00000535005 EMP1P54849 157 aa8.74□□□□□ -1.01
SCARB1-204ENST00000535005 MRPL23Q16540 153 aaKnown RBP8.74□□□□□ -1.01
SCARB1-204ENST00000535005 ANKRD29Q8N6D5 301 aa8.74□□□□□ -1.01
SCARB1-204ENST00000535005 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.73□□□□□ -1.01
SCARB1-204ENST00000535005 RHODO00212 210 aa8.73□□□□□ -1.01
SCARB1-204ENST00000535005 VCYO14598 125 aa8.73□□□□□ -1.01
SCARB1-204ENST00000535005 SPART-AS1P0CW21 52 aa8.73□□□□□ -1.01
SCARB1-204ENST00000535005 ZNF876PQ49A33 203 aa8.73□□□□□ -1.01
SCARB1-204ENST00000535005 FAM222AQ5U5X8 452 aa8.73□□□□□ -1.01
SCARB1-204ENST00000535005 MUC4Q99102 2169 aa8.73□□□□□ -1.01
SCARB1-204ENST00000535005 A0A0J9YWU9 116 aa8.73□□□□□ -1.01
SCARB1-204ENST00000535005 SLC25A20O43772 301 aa8.73□□□□□ -1.01
SCARB1-204ENST00000535005 CRYGDP07320 174 aa8.73□□□□□ -1.01
SCARB1-204ENST00000535005 Q6ZTI0 123 aa8.73□□□□□ -1.01
SCARB1-204ENST00000535005 TRGV1A0A0A0MS02 117 aa8.72□□□□□ -1.01
SCARB1-204ENST00000535005 TRBV6-5A0A0K0K1A5 114 aa8.72□□□□□ -1.01
SCARB1-204ENST00000535005 RPL13AP40429 203 aaKnown RBP8.72□□□□□ -1.01
SCARB1-204ENST00000535005 RPL39LQ96EH5 51 aaKnown RBP8.72□□□□□ -1.01
SCARB1-204ENST00000535005 KIR2DL4Q99706 377 aa8.72□□□□□ -1.01
SCARB1-204ENST00000535005 LEPROTO15243 131 aa8.71□□□□□ -1.01
SCARB1-204ENST00000535005 MGPP08493 103 aa8.71□□□□□ -1.01
SCARB1-204ENST00000535005 LGALS3P17931 250 aaKnown RBP8.71□□□□□ -1.01
SCARB1-204ENST00000535005 POLR2KP53803 58 aaKnown RBP8.71□□□□□ -1.01
SCARB1-204ENST00000535005 RHOHQ15669 191 aa8.71□□□□□ -1.01
SCARB1-204ENST00000535005 ATXN8Q156A1 80 aa8.71□□□□□ -1.01
SCARB1-204ENST00000535005 C14orf178Q8N769 122 aaPredicted RBP8.71□□□□□ -1.01
SCARB1-204ENST00000535005 CELA1Q9UNI1 258 aa8.71□□□□□ -1.01
SCARB1-204ENST00000535005 SDHAF1A6NFY7 115 aa8.7□□□□□ -1.02
SCARB1-204ENST00000535005 J3QQQ9 107 aa8.7□□□□□ -1.02
SCARB1-204ENST00000535005 SNCGO76070 127 aa8.7□□□□□ -1.02
SCARB1-204ENST00000535005 AMELXQ99217 191 aa8.7□□□□□ -1.02
SCARB1-204ENST00000535005 RS1O15537 224 aa8.7□□□□□ -1.02
SCARB1-204ENST00000535005 GAGE7O76087 117 aa8.7□□□□□ -1.02
SCARB1-204ENST00000535005 IGHV3-33P01772 117 aa8.7□□□□□ -1.02
SCARB1-204ENST00000535005 GAGE12FP0CL80 117 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms