RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 SLIT1O75093 1534 aa-1.54□□□□□ -2.66
COPB1-212ENST00000534771 BORCS7-ASMTA0A0B4J1R7 106 aa-1.54□□□□□ -2.66
COPB1-212ENST00000534771 J3QLW9 94 aa-1.54□□□□□ -2.66
COPB1-212ENST00000534771 SLC25A5P05141 298 aaKnown RBP-1.54□□□□□ -2.66
COPB1-212ENST00000534771 COX8AP10176 69 aa-1.54□□□□□ -2.66
COPB1-212ENST00000534771 ATP6V0E2Q8NHE4 81 aa-1.54□□□□□ -2.66
COPB1-212ENST00000534771 C10orf82Q8WW14 230 aa-1.54□□□□□ -2.66
COPB1-212ENST00000534771 DYDC1Q8WWB3 177 aa-1.54□□□□□ -2.66
COPB1-212ENST00000534771 MYH2Q9UKX2 1941 aa-1.54□□□□□ -2.66
COPB1-212ENST00000534771 PLB1Q6P1J6 1458 aa-1.55□□□□□ -2.66
COPB1-212ENST00000534771 H0YGG7 62 aa-1.55□□□□□ -2.66
COPB1-212ENST00000534771 M0QX08 132 aa-1.55□□□□□ -2.66
COPB1-212ENST00000534771 TCRAP04437 139 aa-1.55□□□□□ -2.66
COPB1-212ENST00000534771 RPL22P35268 128 aaKnown RBP-1.55□□□□□ -2.66
COPB1-212ENST00000534771 C9orf116Q5BN46 136 aaPredicted RBP-1.55□□□□□ -2.66
COPB1-212ENST00000534771 PPP1R14BQ96C90 147 aa-1.55□□□□□ -2.66
COPB1-212ENST00000534771 APLNQ9ULZ1 77 aa-1.55□□□□□ -2.66
COPB1-212ENST00000534771 PXDNQ92626 1479 aa-1.56□□□□□ -2.66
COPB1-212ENST00000534771 FMN2Q9NZ56 1722 aa-1.56□□□□□ -2.66
COPB1-212ENST00000534771 CTXND1A0A1B0GTU2 59 aa-1.56□□□□□ -2.66
COPB1-212ENST00000534771 PITX3O75364 302 aa-1.56□□□□□ -2.66
COPB1-212ENST00000534771 IFNA1P01562 189 aa-1.56□□□□□ -2.66
COPB1-212ENST00000534771 RBP4P02753 201 aa-1.56□□□□□ -2.66
COPB1-212ENST00000534771 PIRTP0C851 137 aa-1.56□□□□□ -2.66
COPB1-212ENST00000534771 ASIPP42127 132 aa-1.56□□□□□ -2.66
COPB1-212ENST00000534771 PSPHP78330 225 aa-1.56□□□□□ -2.66
COPB1-212ENST00000534771 COX17Q14061 63 aa-1.56□□□□□ -2.66
COPB1-212ENST00000534771 HRCT1Q6UXD1 115 aa-1.56□□□□□ -2.66
COPB1-212ENST00000534771 FAM24BQ8N5W8 94 aa-1.56□□□□□ -2.66
COPB1-212ENST00000534771 MED31Q9Y3C7 131 aa-1.56□□□□□ -2.66
COPB1-212ENST00000534771 S4R3F8 94 aa-1.56□□□□□ -2.66
COPB1-212ENST00000534771 TULP4Q9NRJ4 1543 aa-1.56□□□□□ -2.66
COPB1-212ENST00000534771 ARHGEF12Q9NZN5 1544 aa-1.56□□□□□ -2.66
COPB1-212ENST00000534771 POLA1P09884 1462 aaPredicted RBP-1.56□□□□□ -2.66
COPB1-212ENST00000534771 ZNF236Q9UL36 1845 aa-1.56□□□□□ -2.66
COPB1-212ENST00000534771 YTHDC2Q9H6S0 1430 aaKnown RBP-1.57□□□□□ -2.66
COPB1-212ENST00000534771 DNAH14Q0VDD8 3507 aa-1.57□□□□□ -2.66
COPB1-212ENST00000534771 M0R135 149 aa-1.57□□□□□ -2.66
COPB1-212ENST00000534771 IFNA17P01571 189 aa-1.57□□□□□ -2.66
COPB1-212ENST00000534771 HSD11B1P28845 292 aa-1.57□□□□□ -2.66
COPB1-212ENST00000534771 CDKN2CP42773 168 aa-1.57□□□□□ -2.66
COPB1-212ENST00000534771 TMEM170BQ5T4T1 132 aa-1.57□□□□□ -2.66
COPB1-212ENST00000534771 TMED4Q7Z7H5 227 aa-1.57□□□□□ -2.66
COPB1-212ENST00000534771 RPRMQ9NS64 109 aa-1.57□□□□□ -2.66
COPB1-212ENST00000534771 NDUFA12Q9UI09 145 aa-1.57□□□□□ -2.66
COPB1-212ENST00000534771 R4GMQ9 66 aa-1.57□□□□□ -2.66
COPB1-212ENST00000534771 HMGXB3Q12766 1538 aa-1.57□□□□□ -2.66
COPB1-212ENST00000534771 SBF2Q86WG5 1849 aa-1.57□□□□□ -2.66
COPB1-212ENST00000534771 MYOM3Q5VTT5 1437 aa-1.57□□□□□ -2.66
COPB1-212ENST00000534771 SZT2Q5T011 3432 aa-1.58□□□□□ -2.66
COPB1-212ENST00000534771 VCANP13611 3396 aa-1.58□□□□□ -2.66
COPB1-212ENST00000534771 TRBV7-4A0A0J9YYF1 115 aa-1.58□□□□□ -2.66
COPB1-212ENST00000534771 YPEL1O60688 119 aa-1.58□□□□□ -2.66
COPB1-212ENST00000534771 FAM107AO95990 144 aa-1.58□□□□□ -2.66
COPB1-212ENST00000534771 GNG3P63215 75 aa-1.58□□□□□ -2.66
COPB1-212ENST00000534771 PTRHD1Q6GMV3 140 aaKnown RBP-1.58□□□□□ -2.66
COPB1-212ENST00000534771 DHRS4L2Q6PKH6 230 aa-1.58□□□□□ -2.66
COPB1-212ENST00000534771 ATP11AUNQ6ZP68 121 aa-1.58□□□□□ -2.66
COPB1-212ENST00000534771 NAA60Q9H7X0 242 aa-1.58□□□□□ -2.66
COPB1-212ENST00000534771 STOML2Q9UJZ1 356 aa-1.58□□□□□ -2.66
COPB1-212ENST00000534771 KIF21AQ7Z4S6 1674 aa-1.58□□□□□ -2.66
COPB1-212ENST00000534771 ADCY9O60503 1353 aa-1.59□□□□□ -2.66
COPB1-212ENST00000534771 PIPP12273 146 aaPredicted RBP-1.59□□□□□ -2.66
COPB1-212ENST00000534771 TCTAP57738 103 aa-1.59□□□□□ -2.66
COPB1-212ENST00000534771 SPANXN1Q5VSR9 72 aa-1.59□□□□□ -2.66
COPB1-212ENST00000534771 LINC01545Q5VT33 79 aa-1.59□□□□□ -2.66
COPB1-212ENST00000534771 ZNF818PQ6ZRF7 136 aa-1.59□□□□□ -2.66
COPB1-212ENST00000534771 SMIM20Q8N5G0 67 aa-1.59□□□□□ -2.66
COPB1-212ENST00000534771 VSTM2AQ8TAG5 236 aa-1.59□□□□□ -2.66
COPB1-212ENST00000534771 USMG5Q96IX5 58 aa-1.59□□□□□ -2.66
COPB1-212ENST00000534771 TRAPPC2LQ9UL33 140 aa-1.59□□□□□ -2.66
COPB1-212ENST00000534771 DNAJC15Q9Y5T4 150 aa-1.59□□□□□ -2.66
COPB1-212ENST00000534771 PAPPA2Q9BXP8 1791 aa-1.59□□□□□ -2.66
COPB1-212ENST00000534771 NWD2Q9ULI1 1742 aa-1.6□□□□□ -2.67
COPB1-212ENST00000534771 CFAP47Q6ZTR5 3102 aa-1.6□□□□□ -2.67
COPB1-212ENST00000534771 CPSF4LA6NMK7 179 aaKnown RBP-1.6□□□□□ -2.67
COPB1-212ENST00000534771 PPP1R17O96001 155 aa-1.6□□□□□ -2.67
COPB1-212ENST00000534771 RGS21Q2M5E4 152 aa-1.6□□□□□ -2.67
COPB1-212ENST00000534771 H1FX-AS1Q4G0G2 97 aa-1.6□□□□□ -2.67
COPB1-212ENST00000534771 RPL7L1Q6DKI1 246 aaKnown RBP-1.6□□□□□ -2.67
COPB1-212ENST00000534771 CEP19Q96LK0 163 aa-1.6□□□□□ -2.67
COPB1-212ENST00000534771 CCDC32Q9BV29 185 aa-1.6□□□□□ -2.67
COPB1-212ENST00000534771 LINC00312Q9Y6C7 94 aa-1.6□□□□□ -2.67
COPB1-212ENST00000534771 ANKRD50Q9ULJ7 1429 aa-1.6□□□□□ -2.67
COPB1-212ENST00000534771 ERCC6Q03468 1493 aa-1.61□□□□□ -2.67
COPB1-212ENST00000534771 MYH3P11055 1940 aa-1.61□□□□□ -2.67
COPB1-212ENST00000534771 C9orf92A6NGG3 77 aa-1.61□□□□□ -2.67
COPB1-212ENST00000534771 E7EQ34 232 aa-1.61□□□□□ -2.67
COPB1-212ENST00000534771 RPL7P18124 248 aaKnown RBP-1.61□□□□□ -2.67
COPB1-212ENST00000534771 POLR2HP52434 150 aaKnown RBP-1.61□□□□□ -2.67
COPB1-212ENST00000534771 CLLU1Q5K131 121 aa-1.61□□□□□ -2.67
COPB1-212ENST00000534771 DCUN1D2Q6PH85 259 aa-1.61□□□□□ -2.67
COPB1-212ENST00000534771 DAPK1P53355 1430 aa-1.61□□□□□ -2.67
COPB1-212ENST00000534771 SETBP1Q9Y6X0 1596 aa-1.61□□□□□ -2.67
COPB1-212ENST00000534771 MYH8P13535 1937 aa-1.62□□□□□ -2.67
COPB1-212ENST00000534771 PCNTO95613 3336 aa-1.62□□□□□ -2.67
COPB1-212ENST00000534771 SYNMO15061 1565 aa-1.62□□□□□ -2.67
COPB1-212ENST00000534771 A6NIN4 97 aa-1.62□□□□□ -2.67
COPB1-212ENST00000534771 PFDN1O60925 122 aa-1.62□□□□□ -2.67
COPB1-212ENST00000534771 NIPSNAP2O75323 286 aa-1.62□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms