RNA–Protein interactions for RNA: ENST00000534720.1

NPIPA1-204, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 5

Gene NPIPA1, Length 1,915 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-204	ENST00000534720	RNF183	Q96D59	192 aa		4.62	□□□□□ -1.67
NPIPA1-204	ENST00000534720	HHLA3	Q9XRX5	114 aa		4.62	□□□□□ -1.67
NPIPA1-204	ENST00000534720	PYGO1	Q9Y3Y4	419 aa		4.62	□□□□□ -1.67
NPIPA1-204	ENST00000534720	COX8A	P10176	69 aa		4.62	□□□□□ -1.67
NPIPA1-204	ENST00000534720	MIF	P14174	115 aa		4.62	□□□□□ -1.67
NPIPA1-204	ENST00000534720	EMP1	P54849	157 aa		4.62	□□□□□ -1.67
NPIPA1-204	ENST00000534720	UBE2D3	P61077	147 aa		4.62	□□□□□ -1.67
NPIPA1-204	ENST00000534720	UBE2D2	P62837	147 aa		4.62	□□□□□ -1.67
NPIPA1-204	ENST00000534720	FHL2	Q14192	279 aa		4.62	□□□□□ -1.67
NPIPA1-204	ENST00000534720	VAMP3	Q15836	100 aa		4.62	□□□□□ -1.67
NPIPA1-204	ENST00000534720	DAZ4	Q86SG3	579 aa	Known RBP	4.62	□□□□□ -1.67
NPIPA1-204	ENST00000534720	PHLDA1	Q8WV24	401 aa	Predicted RBP	4.62	□□□□□ -1.67
NPIPA1-204	ENST00000534720	CHCHD7	Q9BUK0	85 aa		4.62	□□□□□ -1.67
NPIPA1-204	ENST00000534720	DAZ3	Q9NR90	486 aa	Known RBP	4.62	□□□□□ -1.67
NPIPA1-204	ENST00000534720	IGHV3-38	A0A0C4DH36	116 aa		4.61	□□□□□ -1.67
NPIPA1-204	ENST00000534720	CRYBA4	P53673	196 aa		4.61	□□□□□ -1.67
NPIPA1-204	ENST00000534720	PAPPA-AS1	Q5QFB9	102 aa		4.61	□□□□□ -1.67
NPIPA1-204	ENST00000534720	IGLV4-3	A0A075B6K6	122 aa		4.6	□□□□□ -1.67
NPIPA1-204	ENST00000534720	TRAV8-6	A0A0B4J262	113 aa		4.6	□□□□□ -1.67
NPIPA1-204	ENST00000534720	IGHV4-28	A0A0C4DH34	117 aa		4.6	□□□□□ -1.67
NPIPA1-204	ENST00000534720	GAGE12J	A6NER3	117 aa		4.6	□□□□□ -1.67
NPIPA1-204	ENST00000534720	DEFB130B	P0DP73	79 aa		4.6	□□□□□ -1.67
NPIPA1-204	ENST00000534720	DEFB130A	P0DP74	79 aa		4.6	□□□□□ -1.67
NPIPA1-204	ENST00000534720	FGF6	P10767	208 aa		4.6	□□□□□ -1.67
NPIPA1-204	ENST00000534720	GAGE4	Q13068	117 aa		4.6	□□□□□ -1.67
NPIPA1-204	ENST00000534720	GAGE5	Q13069	117 aa		4.6	□□□□□ -1.67
NPIPA1-204	ENST00000534720	GAGE13	Q4V321	117 aa		4.6	□□□□□ -1.67
NPIPA1-204	ENST00000534720	ZC2HC1B	Q5TFG8	222 aa		4.6	□□□□□ -1.67
NPIPA1-204	ENST00000534720	FAM222A	Q5U5X8	452 aa		4.6	□□□□□ -1.67
NPIPA1-204	ENST00000534720	AMMECR1L	Q6DCA0	310 aa		4.6	□□□□□ -1.67
NPIPA1-204	ENST00000534720	PRADC1	Q9BSG0	188 aa		4.6	□□□□□ -1.67
NPIPA1-204	ENST00000534720	GTSF1L	Q9H1H1	148 aa		4.6	□□□□□ -1.67
NPIPA1-204	ENST00000534720	CST9L	Q9H4G1	147 aa		4.6	□□□□□ -1.67
NPIPA1-204	ENST00000534720	OCIAD2	Q56VL3	154 aa		4.6	□□□□□ -1.67
NPIPA1-204	ENST00000534720	BOD1L2	Q8IYS8	172 aa		4.6	□□□□□ -1.67
NPIPA1-204	ENST00000534720		Q8NAQ8	132 aa		4.6	□□□□□ -1.67
NPIPA1-204	ENST00000534720	AMELX	Q99217	191 aa		4.6	□□□□□ -1.67
NPIPA1-204	ENST00000534720	TIMM21	Q9BVV7	248 aa		4.6	□□□□□ -1.67
NPIPA1-204	ENST00000534720	SPANXA1	Q9NS26	97 aa		4.6	□□□□□ -1.67
NPIPA1-204	ENST00000534720	MAST4	O15021	2626 aa		4.59	□□□□□ -1.67
NPIPA1-204	ENST00000534720	IGLV4-69	A0A075B6H9	119 aa		4.59	□□□□□ -1.67
NPIPA1-204	ENST00000534720	LINC00694	P0DN24	101 aa		4.59	□□□□□ -1.67
NPIPA1-204	ENST00000534720	RNF151	Q2KHN1	245 aa		4.59	□□□□□ -1.67
NPIPA1-204	ENST00000534720	OPRPN	Q99935	248 aa	Predicted RBP	4.59	□□□□□ -1.67
NPIPA1-204	ENST00000534720	VCX2	Q9H322	139 aa		4.59	□□□□□ -1.67
NPIPA1-204	ENST00000534720	UBE2D4	Q9Y2X8	147 aa		4.59	□□□□□ -1.67
NPIPA1-204	ENST00000534720	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.58	□□□□□ -1.68
NPIPA1-204	ENST00000534720	LOC100131303	A0A0U1RQF7	123 aa		4.58	□□□□□ -1.68
NPIPA1-204	ENST00000534720	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.58	□□□□□ -1.68
NPIPA1-204	ENST00000534720		G3V4G9	280 aa		4.58	□□□□□ -1.68
NPIPA1-204	ENST00000534720	SIVA1	O15304	175 aa		4.58	□□□□□ -1.68
NPIPA1-204	ENST00000534720	NMU	P48645	174 aa		4.58	□□□□□ -1.68
NPIPA1-204	ENST00000534720	MRPS36	P82909	103 aa	Known RBP	4.58	□□□□□ -1.68
NPIPA1-204	ENST00000534720	SMAGP	Q0VAQ4	97 aa		4.58	□□□□□ -1.68
NPIPA1-204	ENST00000534720	TMEM97	Q5BJF2	176 aa		4.58	□□□□□ -1.68
NPIPA1-204	ENST00000534720	NTM-AS1	Q6ZSK4	140 aa		4.58	□□□□□ -1.68
NPIPA1-204	ENST00000534720	NFE4	Q86UQ8	179 aa		4.58	□□□□□ -1.68
NPIPA1-204	ENST00000534720	SBSPON	Q8IVN8	264 aa		4.58	□□□□□ -1.68
NPIPA1-204	ENST00000534720	FAM104A	Q969W3	186 aa		4.58	□□□□□ -1.68
NPIPA1-204	ENST00000534720	PKD1L1	Q8TDX9	2849 aa		4.58	□□□□□ -1.68
NPIPA1-204	ENST00000534720	DNAH3	Q8TD57	4116 aa		4.58	□□□□□ -1.68
NPIPA1-204	ENST00000534720	NBEAL2	Q6ZNJ1	2754 aa		4.58	□□□□□ -1.68
NPIPA1-204	ENST00000534720	COL6A5	A8TX70	2615 aa		4.58	□□□□□ -1.68
NPIPA1-204	ENST00000534720	IGKV2D-26	A0A0A0MRZ7	120 aa		4.58	□□□□□ -1.68
NPIPA1-204	ENST00000534720	TEX48	A0A1B0GUV7	120 aa		4.58	□□□□□ -1.68
NPIPA1-204	ENST00000534720	C11orf86	A6NJI1	115 aa		4.58	□□□□□ -1.68
NPIPA1-204	ENST00000534720	PLA2G1B	P04054	148 aa	Known RBP	4.58	□□□□□ -1.68
NPIPA1-204	ENST00000534720	SPART-AS1	P0CW21	52 aa		4.58	□□□□□ -1.68
NPIPA1-204	ENST00000534720	DAD1	P61803	113 aa		4.58	□□□□□ -1.68
NPIPA1-204	ENST00000534720	PRO0255	Q9UI72	69 aa		4.58	□□□□□ -1.68
NPIPA1-204	ENST00000534720	CSDC2	Q9Y534	153 aa	Known RBP	4.58	□□□□□ -1.68
NPIPA1-204	ENST00000534720		E9PLD3	99 aa		4.57	□□□□□ -1.68
NPIPA1-204	ENST00000534720		H7C423	109 aa		4.57	□□□□□ -1.68
NPIPA1-204	ENST00000534720	DEFB4A	O15263	64 aa		4.57	□□□□□ -1.68
NPIPA1-204	ENST00000534720	TCTA	P57738	103 aa		4.57	□□□□□ -1.68
NPIPA1-204	ENST00000534720	CEMP1	Q6PRD7	247 aa	Predicted RBP	4.57	□□□□□ -1.68
NPIPA1-204	ENST00000534720	PCP2	Q8IVA1	136 aa		4.57	□□□□□ -1.68
NPIPA1-204	ENST00000534720	KRTAP4-5	Q9BYR2	181 aa		4.57	□□□□□ -1.68
NPIPA1-204	ENST00000534720	CELA1	Q9UNI1	258 aa		4.57	□□□□□ -1.68
NPIPA1-204	ENST00000534720	TRBV25-1	A0A075B6N4	114 aa		4.56	□□□□□ -1.68
NPIPA1-204	ENST00000534720	ATP5G1	P05496	136 aa		4.56	□□□□□ -1.68
NPIPA1-204	ENST00000534720	HERVK_113	P61574	105 aa		4.56	□□□□□ -1.68
NPIPA1-204	ENST00000534720	SEC11A	P67812	179 aa		4.56	□□□□□ -1.68
NPIPA1-204	ENST00000534720		Q6ZUT4	128 aa		4.56	□□□□□ -1.68
NPIPA1-204	ENST00000534720	TMEM243	Q9BU79	118 aa		4.56	□□□□□ -1.68
NPIPA1-204	ENST00000534720	CHAC1	Q9BUX1	264 aa		4.56	□□□□□ -1.68
NPIPA1-204	ENST00000534720		A0A0J9YXV3	536 aa		4.56	□□□□□ -1.68
NPIPA1-204	ENST00000534720	UBE2L6	O14933	153 aa		4.56	□□□□□ -1.68
NPIPA1-204	ENST00000534720	TMEM170B	Q5T4T1	132 aa		4.56	□□□□□ -1.68
NPIPA1-204	ENST00000534720	ATP6V0E2	Q8NHE4	81 aa		4.56	□□□□□ -1.68
NPIPA1-204	ENST00000534720	HIGD1B	Q9P298	99 aa		4.56	□□□□□ -1.68
NPIPA1-204	ENST00000534720	TRBV6-8	A0A0A6YYG3	113 aa		4.55	□□□□□ -1.68
NPIPA1-204	ENST00000534720	TINCR	A0A1B0GVN0	87 aa		4.55	□□□□□ -1.68
NPIPA1-204	ENST00000534720	C9orf118	A6NHY6	69 aa		4.55	□□□□□ -1.68
NPIPA1-204	ENST00000534720		H3BRM9	83 aa		4.55	□□□□□ -1.68
NPIPA1-204	ENST00000534720	ZNF22	P17026	224 aa	Predicted RBP	4.55	□□□□□ -1.68
NPIPA1-204	ENST00000534720	FAM19A3	Q7Z5A8	133 aa		4.55	□□□□□ -1.68
NPIPA1-204	ENST00000534720	VPS25	Q9BRG1	176 aa		4.55	□□□□□ -1.68
NPIPA1-204	ENST00000534720	C11orf68	Q9H3H3	251 aa	Known RBP	4.55	□□□□□ -1.68
NPIPA1-204	ENST00000534720	ANK2	Q01484	3957 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms