RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 ARL6Q9H0F7 186 aa2.12□□□□□ -2.07
ECHDC1-223ENST00000534442 KCNIP2Q9NS61 270 aa2.12□□□□□ -2.07
ECHDC1-223ENST00000534442 SSR3Q9UNL2 185 aa2.12□□□□□ -2.07
ECHDC1-223ENST00000534442 A0A1B0GU33 70 aa2.11□□□□□ -2.07
ECHDC1-223ENST00000534442 PNMA8CA0A1B0GUJ8 204 aa2.11□□□□□ -2.07
ECHDC1-223ENST00000534442 MEIS3P1A6NDR6 274 aa2.11□□□□□ -2.07
ECHDC1-223ENST00000534442 SH2D1AO60880 128 aa2.11□□□□□ -2.07
ECHDC1-223ENST00000534442 ANGP03950 147 aaKnown RBP2.11□□□□□ -2.07
ECHDC1-223ENST00000534442 S100A7P31151 101 aa2.11□□□□□ -2.07
ECHDC1-223ENST00000534442 AQP4P55087 323 aa2.11□□□□□ -2.07
ECHDC1-223ENST00000534442 LGALSLQ3ZCW2 172 aaPredicted RBP2.11□□□□□ -2.07
ECHDC1-223ENST00000534442 XAF1Q6GPH4 301 aa2.11□□□□□ -2.07
ECHDC1-223ENST00000534442 TSKUQ8WUA8 353 aa2.11□□□□□ -2.07
ECHDC1-223ENST00000534442 CANT1Q8WVQ1 401 aa2.11□□□□□ -2.07
ECHDC1-223ENST00000534442 SMIM12Q96EX1 92 aa2.11□□□□□ -2.07
ECHDC1-223ENST00000534442 SLC50A1Q9BRV3 221 aa2.11□□□□□ -2.07
ECHDC1-223ENST00000534442 C9orf16Q9BUW7 83 aa2.11□□□□□ -2.07
ECHDC1-223ENST00000534442 MIXL1Q9H2W2 232 aa2.11□□□□□ -2.07
ECHDC1-223ENST00000534442 ENY2Q9NPA8 101 aa2.11□□□□□ -2.07
ECHDC1-223ENST00000534442 B4DEV8 164 aa2.1□□□□□ -2.07
ECHDC1-223ENST00000534442 G3V2T6 193 aa2.1□□□□□ -2.07
ECHDC1-223ENST00000534442 HPGDSO60760 199 aa2.1□□□□□ -2.07
ECHDC1-223ENST00000534442 LINC00694P0DN24 101 aa2.1□□□□□ -2.07
ECHDC1-223ENST00000534442 RNASE4P34096 147 aaKnown RBP2.1□□□□□ -2.07
ECHDC1-223ENST00000534442 SMAGPQ0VAQ4 97 aa2.1□□□□□ -2.07
ECHDC1-223ENST00000534442 NEDD8Q15843 81 aa2.1□□□□□ -2.07
ECHDC1-223ENST00000534442 PYDC2Q56P42 97 aa2.1□□□□□ -2.07
ECHDC1-223ENST00000534442 ZNF818PQ6ZRF7 136 aa2.1□□□□□ -2.07
ECHDC1-223ENST00000534442 LHFPL5Q8TAF8 219 aa2.1□□□□□ -2.07
ECHDC1-223ENST00000534442 BORCS5Q969J3 196 aa2.1□□□□□ -2.07
ECHDC1-223ENST00000534442 PDCD10Q9BUL8 212 aa2.1□□□□□ -2.07
ECHDC1-223ENST00000534442 SLC39A9Q9NUM3 307 aa2.1□□□□□ -2.07
ECHDC1-223ENST00000534442 TINCRA0A1B0GVN0 87 aa2.09□□□□□ -2.07
ECHDC1-223ENST00000534442 PPYP01298 95 aa2.09□□□□□ -2.07
ECHDC1-223ENST00000534442 IGLV6-57P01721 117 aa2.09□□□□□ -2.07
ECHDC1-223ENST00000534442 GZMBP10144 247 aa2.09□□□□□ -2.07
ECHDC1-223ENST00000534442 MGST1P10620 155 aaKnown RBP2.09□□□□□ -2.07
ECHDC1-223ENST00000534442 HIST1H1DP16402 221 aaKnown RBP2.09□□□□□ -2.07
ECHDC1-223ENST00000534442 RPL7P18124 248 aaKnown RBP2.09□□□□□ -2.07
ECHDC1-223ENST00000534442 DAPP51397 102 aa2.09□□□□□ -2.07
ECHDC1-223ENST00000534442 GABARAPL2P60520 117 aa2.09□□□□□ -2.07
ECHDC1-223ENST00000534442 LSM3P62310 102 aaKnown RBP2.09□□□□□ -2.07
ECHDC1-223ENST00000534442 PP632Q6XCG6 107 aa2.09□□□□□ -2.07
ECHDC1-223ENST00000534442 C8orf59Q8N0T1 100 aaPredicted RBP2.09□□□□□ -2.07
ECHDC1-223ENST00000534442 SCN3BQ9NY72 215 aa2.09□□□□□ -2.07
ECHDC1-223ENST00000534442 TMEM262E9PQX1 116 aa2.08□□□□□ -2.08
ECHDC1-223ENST00000534442 M0R2P5 195 aa2.08□□□□□ -2.08
ECHDC1-223ENST00000534442 PGLYRP1O75594 196 aaPredicted RBP2.08□□□□□ -2.08
ECHDC1-223ENST00000534442 ARL6IP5O75915 188 aa2.08□□□□□ -2.08
ECHDC1-223ENST00000534442 CFDP00746 253 aaPredicted RBP2.08□□□□□ -2.08
ECHDC1-223ENST00000534442 GPX1P07203 203 aa2.08□□□□□ -2.08
ECHDC1-223ENST00000534442 ZNF22P17026 224 aaPredicted RBP2.08□□□□□ -2.08
ECHDC1-223ENST00000534442 ORM2P19652 201 aa2.08□□□□□ -2.08
ECHDC1-223ENST00000534442 CXCL2P19875 107 aa2.08□□□□□ -2.08
ECHDC1-223ENST00000534442 FXYD4P59646 89 aa2.08□□□□□ -2.08
ECHDC1-223ENST00000534442 EIF5AL1Q6IS14 154 aaKnown RBP2.08□□□□□ -2.08
ECHDC1-223ENST00000534442 Q6Q795 121 aa2.08□□□□□ -2.08
ECHDC1-223ENST00000534442 FAM19A5Q7Z5A7 132 aaPredicted RBP2.08□□□□□ -2.08
ECHDC1-223ENST00000534442 CLVS1Q8IUQ0 354 aaPredicted RBP2.08□□□□□ -2.08
ECHDC1-223ENST00000534442 HIST1H2BAQ96A08 127 aa2.08□□□□□ -2.08
ECHDC1-223ENST00000534442 LOC100130705A0A1B0GUX0 176 aa2.07□□□□□ -2.08
ECHDC1-223ENST00000534442 TCRBV3S1A0A5B6 114 aa2.07□□□□□ -2.08
ECHDC1-223ENST00000534442 GABARAPH6UMI1 98 aa2.07□□□□□ -2.08
ECHDC1-223ENST00000534442 SYNGR2O43760 224 aa2.07□□□□□ -2.08
ECHDC1-223ENST00000534442 SLC25A20O43772 301 aa2.07□□□□□ -2.08
ECHDC1-223ENST00000534442 NMBP08949 121 aa2.07□□□□□ -2.08
ECHDC1-223ENST00000534442 OR4E1P0C645 316 aa2.07□□□□□ -2.08
ECHDC1-223ENST00000534442 MYL12AP19105 171 aa2.07□□□□□ -2.08
ECHDC1-223ENST00000534442 RPS25P62851 125 aaKnown RBP2.07□□□□□ -2.08
ECHDC1-223ENST00000534442 LCN15Q6UWW0 184 aa2.07□□□□□ -2.08
ECHDC1-223ENST00000534442 SCGB1D4Q6XE38 83 aa2.07□□□□□ -2.08
ECHDC1-223ENST00000534442 PHF5AQ7RTV0 110 aaKnown RBP2.07□□□□□ -2.08
ECHDC1-223ENST00000534442 ZFAND2AQ8N6M9 145 aa2.07□□□□□ -2.08
ECHDC1-223ENST00000534442 DAND5Q8N907 189 aa2.07□□□□□ -2.08
ECHDC1-223ENST00000534442 TMEM147Q9BVK8 224 aa2.07□□□□□ -2.08
ECHDC1-223ENST00000534442 GNB1LQ9BYB4 327 aa2.07□□□□□ -2.08
ECHDC1-223ENST00000534442 TPRKBQ9Y3C4 175 aa2.07□□□□□ -2.08
ECHDC1-223ENST00000534442 A0A087WXM4 84 aa2.06□□□□□ -2.08
ECHDC1-223ENST00000534442 A0A0A6YYH2 397 aa2.06□□□□□ -2.08
ECHDC1-223ENST00000534442 IGHV3-73A0A0B4J1V6 119 aa2.06□□□□□ -2.08
ECHDC1-223ENST00000534442 A6NJ64 397 aa2.06□□□□□ -2.08
ECHDC1-223ENST00000534442 SLC17A3O00476 420 aa2.06□□□□□ -2.08
ECHDC1-223ENST00000534442 H2BFSP57053 126 aa2.06□□□□□ -2.08
ECHDC1-223ENST00000534442 LINC00313P59037 77 aa2.06□□□□□ -2.08
ECHDC1-223ENST00000534442 PKIAP61925 76 aa2.06□□□□□ -2.08
ECHDC1-223ENST00000534442 C9orf116Q5BN46 136 aaPredicted RBP2.06□□□□□ -2.08
ECHDC1-223ENST00000534442 CFAP126Q5VTH2 177 aa2.06□□□□□ -2.08
ECHDC1-223ENST00000534442 CLPSL2Q6UWE3 100 aa2.06□□□□□ -2.08
ECHDC1-223ENST00000534442 KRTAP5-5Q701N2 237 aaPredicted RBP2.06□□□□□ -2.08
ECHDC1-223ENST00000534442 LINC00269Q8N2A0 174 aa2.06□□□□□ -2.08
ECHDC1-223ENST00000534442 CMTM2Q8TAZ6 248 aa2.06□□□□□ -2.08
ECHDC1-223ENST00000534442 TRGV9Q99603 122 aa2.06□□□□□ -2.08
ECHDC1-223ENST00000534442 MRPS26Q9BYN8 205 aaKnown RBP2.06□□□□□ -2.08
ECHDC1-223ENST00000534442 UBE2D4Q9Y2X8 147 aa2.06□□□□□ -2.08
ECHDC1-223ENST00000534442 A0A1W2PNM2 257 aa2.05□□□□□ -2.08
ECHDC1-223ENST00000534442 FAM25AB3EWG3 89 aa2.05□□□□□ -2.08
ECHDC1-223ENST00000534442 FAM25CB3EWG5 89 aa2.05□□□□□ -2.08
ECHDC1-223ENST00000534442 FAM25GB3EWG6 89 aa2.05□□□□□ -2.08
ECHDC1-223ENST00000534442 H3BRN7 92 aa2.05□□□□□ -2.08
ECHDC1-223ENST00000534442 TAS2R20P59543 309 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms