RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 LINC00846Q9NV44 126 aa5.78□□□□□ -1.48
CSDE1-215ENST00000533818 C1orf196B1AJZ1 125 aa5.77□□□□□ -1.49
CSDE1-215ENST00000533818 F8WDY8 70 aa5.77□□□□□ -1.49
CSDE1-215ENST00000533818 NCR2O95944 276 aa5.77□□□□□ -1.49
CSDE1-215ENST00000533818 APCSP02743 223 aa5.77□□□□□ -1.49
CSDE1-215ENST00000533818 STAG3L2P0CL84 134 aa5.77□□□□□ -1.49
CSDE1-215ENST00000533818 STAG3L3P0CL85 134 aa5.77□□□□□ -1.49
CSDE1-215ENST00000533818 LBHQ53QV2 105 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-215ENST00000533818 C9orf129Q5T035 196 aaKnown RBP5.77□□□□□ -1.49
CSDE1-215ENST00000533818 UNQ6190/PRO20217Q6UXQ8 127 aa5.77□□□□□ -1.49
CSDE1-215ENST00000533818 C3orf22Q8N5N4 141 aa5.77□□□□□ -1.49
CSDE1-215ENST00000533818 TMEM167BQ9NRX6 74 aa5.77□□□□□ -1.49
CSDE1-215ENST00000533818 CDC34P49427 236 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-215ENST00000533818 CDC42SE2Q9NRR3 84 aa5.76□□□□□ -1.49
CSDE1-215ENST00000533818 C6orf48Q9UBA6 75 aa5.76□□□□□ -1.49
CSDE1-215ENST00000533818 NDUFA12Q9UI09 145 aa5.76□□□□□ -1.49
CSDE1-215ENST00000533818 C22orf24Q9Y442 160 aa5.76□□□□□ -1.49
CSDE1-215ENST00000533818 ALG5Q9Y673 324 aa5.76□□□□□ -1.49
CSDE1-215ENST00000533818 A0A1W2PRE2 83 aa5.75□□□□□ -1.49
CSDE1-215ENST00000533818 CTRLP40313 264 aa5.75□□□□□ -1.49
CSDE1-215ENST00000533818 UBE2G1P62253 170 aa5.75□□□□□ -1.49
CSDE1-215ENST00000533818 OR10D4PQ8NGN7 298 aa5.75□□□□□ -1.49
CSDE1-215ENST00000533818 RAB24Q969Q5 203 aa5.75□□□□□ -1.49
CSDE1-215ENST00000533818 KRTAP9-8Q9BYQ0 159 aa5.75□□□□□ -1.49
CSDE1-215ENST00000533818 NAP1L6A6NFF2 107 aa5.74□□□□□ -1.49
CSDE1-215ENST00000533818 ORAOV1Q8WV07 137 aa5.74□□□□□ -1.49
CSDE1-215ENST00000533818 HIST1H2BAQ96A08 127 aa5.74□□□□□ -1.49
CSDE1-215ENST00000533818 FMC1Q96HJ9 113 aa5.74□□□□□ -1.49
CSDE1-215ENST00000533818 CXorf1O96002 111 aa5.73□□□□□ -1.49
CSDE1-215ENST00000533818 UBE2AP49459 152 aa5.73□□□□□ -1.49
CSDE1-215ENST00000533818 SMIM3Q9BZL3 60 aa5.73□□□□□ -1.49
CSDE1-215ENST00000533818 NDUFC2-KCTD14E9PQ53 114 aa5.72□□□□□ -1.49
CSDE1-215ENST00000533818 LTAP01374 205 aa5.72□□□□□ -1.49
CSDE1-215ENST00000533818 TPPP3Q9BW30 176 aa5.72□□□□□ -1.49
CSDE1-215ENST00000533818 TRAV13-1A0A0B4J241 112 aa5.71□□□□□ -1.5
CSDE1-215ENST00000533818 UBE2G2P60604 165 aa5.71□□□□□ -1.5
CSDE1-215ENST00000533818 KRTAP13-1Q8IUC0 172 aa5.71□□□□□ -1.5
CSDE1-215ENST00000533818 PACRGQ96M98 296 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-215ENST00000533818 CYTL1Q9NRR1 136 aa5.71□□□□□ -1.5
CSDE1-215ENST00000533818 GHRHP01286 108 aa5.7□□□□□ -1.5
CSDE1-215ENST00000533818 MRPL55Q7Z7F7 128 aaKnown RBP5.7□□□□□ -1.5
CSDE1-215ENST00000533818 MRPL52Q86TS9 123 aaKnown RBP5.7□□□□□ -1.5
CSDE1-215ENST00000533818 SEC22CQ9BRL7 303 aa5.7□□□□□ -1.5
CSDE1-215ENST00000533818 V9GYH0 126 aa5.7□□□□□ -1.5
CSDE1-215ENST00000533818 H0YIZ8 118 aa5.69□□□□□ -1.5
CSDE1-215ENST00000533818 GATD1Q8NB37 220 aa5.69□□□□□ -1.5
CSDE1-215ENST00000533818 MRAP2Q96G30 205 aa5.69□□□□□ -1.5
CSDE1-215ENST00000533818 MARVELD1Q9BSK0 173 aa5.69□□□□□ -1.5
CSDE1-215ENST00000533818 HSPB11Q9Y547 144 aa5.69□□□□□ -1.5
CSDE1-215ENST00000533818 RPL37AP8A6NKH3 93 aa5.68□□□□□ -1.5
CSDE1-215ENST00000533818 SPINK1P00995 79 aa5.68□□□□□ -1.5
CSDE1-215ENST00000533818 TRGC1P0CF51 173 aa5.68□□□□□ -1.5
CSDE1-215ENST00000533818 PMCHP20382 165 aa5.68□□□□□ -1.5
CSDE1-215ENST00000533818 BTCP35070 178 aa5.68□□□□□ -1.5
CSDE1-215ENST00000533818 CNPY1Q3B7I2 92 aa5.68□□□□□ -1.5
CSDE1-215ENST00000533818 NKX6-2Q9C056 277 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-215ENST00000533818 SDHAF1A6NFY7 115 aa5.67□□□□□ -1.5
CSDE1-215ENST00000533818 FAM74A7A6NL05 159 aa5.67□□□□□ -1.5
CSDE1-215ENST00000533818 RNASE13Q5GAN3 156 aaKnown RBP5.67□□□□□ -1.5
CSDE1-215ENST00000533818 MZT2BQ6NZ67 158 aa5.67□□□□□ -1.5
CSDE1-215ENST00000533818 FAM19A2Q8N3H0 131 aa5.67□□□□□ -1.5
CSDE1-215ENST00000533818 Q8NBF4 154 aa5.67□□□□□ -1.5
CSDE1-215ENST00000533818 RPL39LQ96EH5 51 aaKnown RBP5.67□□□□□ -1.5
CSDE1-215ENST00000533818 TP73-AS1Q9UF72 201 aa5.67□□□□□ -1.5
CSDE1-215ENST00000533818 TRBV30A0A0K0K1B3 111 aa5.66□□□□□ -1.5
CSDE1-215ENST00000533818 CENPXA8MT69 81 aa5.66□□□□□ -1.5
CSDE1-215ENST00000533818 I3L3M4 83 aa5.66□□□□□ -1.5
CSDE1-215ENST00000533818 DEFA1P59665 94 aa5.66□□□□□ -1.5
CSDE1-215ENST00000533818 KRTAP19-6Q3LI70 58 aa5.66□□□□□ -1.5
CSDE1-215ENST00000533818 LINC00469Q8N7U9 141 aa5.66□□□□□ -1.5
CSDE1-215ENST00000533818 ACTR3CQ9C0K3 210 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-215ENST00000533818 IGLC6P0CF74 106 aa5.65□□□□□ -1.5
CSDE1-215ENST00000533818 TRIQKQ629K1 86 aa5.65□□□□□ -1.5
CSDE1-215ENST00000533818 LINC00167Q96N53 147 aa5.65□□□□□ -1.5
CSDE1-215ENST00000533818 XAGE1AQ9HD64 81 aa5.65□□□□□ -1.5
CSDE1-215ENST00000533818 SIX6O95475 246 aa5.64□□□□□ -1.51
CSDE1-215ENST00000533818 AKR1C3P42330 323 aa5.64□□□□□ -1.51
CSDE1-215ENST00000533818 FOXA3P55318 350 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-215ENST00000533818 C2orf82Q6UX34 121 aa5.64□□□□□ -1.51
CSDE1-215ENST00000533818 Q8N377 158 aa5.64□□□□□ -1.51
CSDE1-215ENST00000533818 PLEKHB2Q96CS7 222 aa5.64□□□□□ -1.51
CSDE1-215ENST00000533818 GAGE10A6NGK3 116 aa5.63□□□□□ -1.51
CSDE1-215ENST00000533818 ZNF727A8MUV8 499 aa5.63□□□□□ -1.51
CSDE1-215ENST00000533818 INMT-MINDY4F8WBC2 141 aa5.63□□□□□ -1.51
CSDE1-215ENST00000533818 UPK1BO75841 260 aa5.63□□□□□ -1.51
CSDE1-215ENST00000533818 MBP02144 154 aa5.63□□□□□ -1.51
CSDE1-215ENST00000533818 ATP6V0CP27449 155 aa5.63□□□□□ -1.51
CSDE1-215ENST00000533818 TMEM242Q9NWH2 141 aa5.63□□□□□ -1.51
CSDE1-215ENST00000533818 IGHV3OR16-9A0A0B4J2B5 98 aa5.62□□□□□ -1.51
CSDE1-215ENST00000533818 F2Z2F3 143 aa5.62□□□□□ -1.51
CSDE1-215ENST00000533818 SLC25A20O43772 301 aa5.62□□□□□ -1.51
CSDE1-215ENST00000533818 PRLHP81277 87 aa5.62□□□□□ -1.51
CSDE1-215ENST00000533818 KIAA0087Q14695 138 aa5.62□□□□□ -1.51
CSDE1-215ENST00000533818 LYZL1Q6UWQ5 148 aa5.62□□□□□ -1.51
CSDE1-215ENST00000533818 BAGE2Q86Y30 109 aa5.62□□□□□ -1.51
CSDE1-215ENST00000533818 STOML3Q8TAV4 291 aa5.62□□□□□ -1.51
CSDE1-215ENST00000533818 C7orf77A4D0Y5 90 aa5.61□□□□□ -1.51
CSDE1-215ENST00000533818 CCDC160A6NGH7 325 aa5.61□□□□□ -1.51
CSDE1-215ENST00000533818 CSDC2Q9Y534 153 aaKnown RBP5.61□□□□□ -1.51
CSDE1-215ENST00000533818 MUC12Q9UKN1 5478 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms