RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 KMT2AQ03164 3969 aa7.64□□□□□ -1.19
TRAPPC4-211ENST00000533012 DNAH6Q9C0G6 4158 aa7.63□□□□□ -1.19
TRAPPC4-211ENST00000533012 UBE2L6O14933 153 aa7.63□□□□□ -1.19
TRAPPC4-211ENST00000533012 HBDP02042 147 aa7.63□□□□□ -1.19
TRAPPC4-211ENST00000533012 FCER1GP30273 86 aa7.63□□□□□ -1.19
TRAPPC4-211ENST00000533012 RPL32P62910 135 aaKnown RBP7.63□□□□□ -1.19
TRAPPC4-211ENST00000533012 GAGE6Q13070 117 aa7.63□□□□□ -1.19
TRAPPC4-211ENST00000533012 ZNF664Q8N3J9 261 aa7.63□□□□□ -1.19
TRAPPC4-211ENST00000533012 CHCHD7Q9BUK0 85 aa7.63□□□□□ -1.19
TRAPPC4-211ENST00000533012 LOC389332A0A1B0GUA5 103 aa7.62□□□□□ -1.19
TRAPPC4-211ENST00000533012 PRSS47A8MTI9 375 aa7.62□□□□□ -1.19
TRAPPC4-211ENST00000533012 TCAPO15273 167 aa7.62□□□□□ -1.19
TRAPPC4-211ENST00000533012 C1orf134Q5TEV5 83 aa7.62□□□□□ -1.19
TRAPPC4-211ENST00000533012 LINC01546A6NGU7 62 aa7.61□□□□□ -1.19
TRAPPC4-211ENST00000533012 LINC00587B1AMM8 73 aa7.61□□□□□ -1.19
TRAPPC4-211ENST00000533012 IBA57-AS1B1ANH7 110 aa7.61□□□□□ -1.19
TRAPPC4-211ENST00000533012 SYS1-DBNDD2H3BUS1 97 aa7.61□□□□□ -1.19
TRAPPC4-211ENST00000533012 H7C423 109 aa7.61□□□□□ -1.19
TRAPPC4-211ENST00000533012 TSHBP01222 138 aa7.61□□□□□ -1.19
TRAPPC4-211ENST00000533012 CDPF1Q6NVV7 123 aa7.61□□□□□ -1.19
TRAPPC4-211ENST00000533012 SPATA12Q7Z6I5 190 aa7.61□□□□□ -1.19
TRAPPC4-211ENST00000533012 Q8N8P6 123 aa7.61□□□□□ -1.19
TRAPPC4-211ENST00000533012 SMIM2Q9BVW6 85 aa7.61□□□□□ -1.19
TRAPPC4-211ENST00000533012 KRTAP1-5Q9BYS1 174 aa7.61□□□□□ -1.19
TRAPPC4-211ENST00000533012 PRO1933Q9H354 126 aa7.61□□□□□ -1.19
TRAPPC4-211ENST00000533012 DNAH2Q9P225 4427 aa7.61□□□□□ -1.19
TRAPPC4-211ENST00000533012 IFI27P40305 119 aaPredicted RBP7.6□□□□□ -1.19
TRAPPC4-211ENST00000533012 C6orf223Q8N319 242 aa7.6□□□□□ -1.19
TRAPPC4-211ENST00000533012 Q8N3U1 123 aa7.6□□□□□ -1.19
TRAPPC4-211ENST00000533012 URB1-AS1Q96HZ7 61 aa7.6□□□□□ -1.19
TRAPPC4-211ENST00000533012 KLK12Q9UKR0 248 aa7.6□□□□□ -1.19
TRAPPC4-211ENST00000533012 A0A1B0GUV1 79 aa7.59□□□□□ -1.19
TRAPPC4-211ENST00000533012 ATP5LO75964 103 aa7.59□□□□□ -1.19
TRAPPC4-211ENST00000533012 RBX1P62877 108 aa7.59□□□□□ -1.19
TRAPPC4-211ENST00000533012 SPATA45Q537H7 98 aa7.59□□□□□ -1.19
TRAPPC4-211ENST00000533012 ORMDL2Q53FV1 153 aa7.59□□□□□ -1.19
TRAPPC4-211ENST00000533012 MPV17L2Q567V2 206 aa7.59□□□□□ -1.19
TRAPPC4-211ENST00000533012 AMMECR1LQ6DCA0 310 aa7.59□□□□□ -1.19
TRAPPC4-211ENST00000533012 NFE4Q86UQ8 179 aa7.59□□□□□ -1.19
TRAPPC4-211ENST00000533012 Q8N976 141 aa7.59□□□□□ -1.19
TRAPPC4-211ENST00000533012 MIEN1Q9BRT3 115 aa7.59□□□□□ -1.19
TRAPPC4-211ENST00000533012 UQCR10Q9UDW1 63 aa7.59□□□□□ -1.19
TRAPPC4-211ENST00000533012 PAM16Q9Y3D7 125 aa7.59□□□□□ -1.19
TRAPPC4-211ENST00000533012 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC4-211ENST00000533012 TRAV8-3A0A0A6YYJ7 113 aa7.58□□□□□ -1.2
TRAPPC4-211ENST00000533012 IGKV2-29A2NJV5 120 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC4-211ENST00000533012 ANGP03950 147 aaKnown RBP7.58□□□□□ -1.2
TRAPPC4-211ENST00000533012 SMAGPQ0VAQ4 97 aa7.58□□□□□ -1.2
TRAPPC4-211ENST00000533012 LAGE3Q14657 143 aa7.58□□□□□ -1.2
TRAPPC4-211ENST00000533012 KRTAP3-3Q9BYR6 98 aa7.58□□□□□ -1.2
TRAPPC4-211ENST00000533012 KRTAP3-2Q9BYR7 98 aa7.58□□□□□ -1.2
TRAPPC4-211ENST00000533012 FGF6P10767 208 aa7.57□□□□□ -1.2
TRAPPC4-211ENST00000533012 UBE2WQ96B02 151 aa7.57□□□□□ -1.2
TRAPPC4-211ENST00000533012 IFI27L1Q96BM0 104 aa7.57□□□□□ -1.2
TRAPPC4-211ENST00000533012 TMEM101Q96IK0 257 aa7.57□□□□□ -1.2
TRAPPC4-211ENST00000533012 DNAH10Q8IVF4 4471 aa7.56□□□□□ -1.2
TRAPPC4-211ENST00000533012 IGLV4-60A0A075B6I1 120 aa7.56□□□□□ -1.2
TRAPPC4-211ENST00000533012 CRPP02741 224 aa7.56□□□□□ -1.2
TRAPPC4-211ENST00000533012 ZNF25P17030 456 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC4-211ENST00000533012 LINC01545Q5VT33 79 aa7.56□□□□□ -1.2
TRAPPC4-211ENST00000533012 DGAT2L7PQ6IED9 249 aa7.56□□□□□ -1.2
TRAPPC4-211ENST00000533012 LINC00269Q8N2A0 174 aa7.56□□□□□ -1.2
TRAPPC4-211ENST00000533012 C20orf203Q8NBC4 194 aa7.56□□□□□ -1.2
TRAPPC4-211ENST00000533012 PMCHL2Q9BQD1 86 aa7.56□□□□□ -1.2
TRAPPC4-211ENST00000533012 Q9HAA7 133 aa7.56□□□□□ -1.2
TRAPPC4-211ENST00000533012 RTL8CO15255 209 aa7.55□□□□□ -1.2
TRAPPC4-211ENST00000533012 LINC00336Q6ZUF6 198 aa7.55□□□□□ -1.2
TRAPPC4-211ENST00000533012 OR5A1Q8NGJ0 315 aa7.55□□□□□ -1.2
TRAPPC4-211ENST00000533012 RMI2Q96E14 147 aa7.55□□□□□ -1.2
TRAPPC4-211ENST00000533012 TM2D2Q9BX73 214 aa7.55□□□□□ -1.2
TRAPPC4-211ENST00000533012 M0R143 59 aa7.54□□□□□ -1.2
TRAPPC4-211ENST00000533012 HNRNPA3P51991 378 aaKnown RBP7.54□□□□□ -1.2
TRAPPC4-211ENST00000533012 CTAG1AP78358 180 aa7.54□□□□□ -1.2
TRAPPC4-211ENST00000533012 REG3AQ06141 175 aa7.54□□□□□ -1.2
TRAPPC4-211ENST00000533012 ENHOQ6UWT2 76 aa7.54□□□□□ -1.2
TRAPPC4-211ENST00000533012 C14orf144Q96I85 54 aa7.54□□□□□ -1.2
TRAPPC4-211ENST00000533012 PRR34Q9NV39 138 aa7.54□□□□□ -1.2
TRAPPC4-211ENST00000533012 CSDC2Q9Y534 153 aaKnown RBP7.54□□□□□ -1.2
TRAPPC4-211ENST00000533012 COX11Q9Y6N1 276 aa7.54□□□□□ -1.2
TRAPPC4-211ENST00000533012 DNAH17Q9UFH2 4485 aa7.54□□□□□ -1.2
TRAPPC4-211ENST00000533012 PRSS29PA6NIE9 313 aa7.53□□□□□ -1.2
TRAPPC4-211ENST00000533012 PSCAO43653 123 aa7.53□□□□□ -1.2
TRAPPC4-211ENST00000533012 IGLC3P0DOY3 106 aa7.53□□□□□ -1.2
TRAPPC4-211ENST00000533012 MIAQ16674 131 aa7.53□□□□□ -1.2
TRAPPC4-211ENST00000533012 TIMM21Q9BVV7 248 aa7.53□□□□□ -1.2
TRAPPC4-211ENST00000533012 UBE2D4Q9Y2X8 147 aa7.53□□□□□ -1.2
TRAPPC4-211ENST00000533012 IGKV2D-24A0A075B6R9 120 aa7.52□□□□□ -1.21
TRAPPC4-211ENST00000533012 TRAV8-4A0A0B4J246 113 aa7.52□□□□□ -1.21
TRAPPC4-211ENST00000533012 H0Y8G0 127 aa7.52□□□□□ -1.21
TRAPPC4-211ENST00000533012 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC4-211ENST00000533012 RPL39P62891 51 aaKnown RBP7.52□□□□□ -1.21
TRAPPC4-211ENST00000533012 CLPSL2Q6UWE3 100 aa7.52□□□□□ -1.21
TRAPPC4-211ENST00000533012 Q6ZN92 141 aa7.52□□□□□ -1.21
TRAPPC4-211ENST00000533012 Q6ZRN7 208 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC4-211ENST00000533012 C1orf43Q9BWL3 253 aa7.52□□□□□ -1.21
TRAPPC4-211ENST00000533012 CDC42SE2Q9NRR3 84 aa7.52□□□□□ -1.21
TRAPPC4-211ENST00000533012 CYSLTR1Q9Y271 337 aa7.52□□□□□ -1.21
TRAPPC4-211ENST00000533012 A0A096LNJ9 63 aa7.51□□□□□ -1.21
TRAPPC4-211ENST00000533012 IGKV3OR2-268A0A0C4DH90 116 aa7.51□□□□□ -1.21
TRAPPC4-211ENST00000533012 PRSS1P07477 247 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms