RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 DUX3Q96PT4 197 aa13.03□□□□□ -0.32
UBXN1-213ENST00000532904 CITED1Q99966 193 aa13.03□□□□□ -0.32
UBXN1-213ENST00000532904 RBMY1BA6NDE4 496 aaKnown RBP13.02□□□□□ -0.33
UBXN1-213ENST00000532904 RBMY1EA6NEQ0 496 aaKnown RBP13.02□□□□□ -0.33
UBXN1-213ENST00000532904 RBMY1DP0C7P1 496 aaKnown RBP13.02□□□□□ -0.33
UBXN1-213ENST00000532904 RPL13AP40429 203 aaKnown RBP13.02□□□□□ -0.33
UBXN1-213ENST00000532904 ZNF415Q09FC8 603 aa13.02□□□□□ -0.33
UBXN1-213ENST00000532904 Q9UF83 564 aa13.02□□□□□ -0.33
UBXN1-213ENST00000532904 ACANP16112 2415 aa13.02□□□□□ -0.33
UBXN1-213ENST00000532904 RNF183Q96D59 192 aa13.01□□□□□ -0.33
UBXN1-213ENST00000532904 ICOSQ9Y6W8 199 aa13.01□□□□□ -0.33
UBXN1-213ENST00000532904 HILS1P60008 231 aa13.01□□□□□ -0.33
UBXN1-213ENST00000532904 ZFAND6Q6FIF0 208 aa13.01□□□□□ -0.33
UBXN1-213ENST00000532904 LINC01006Q8NI28 216 aa13□□□□□ -0.33
UBXN1-213ENST00000532904 PRM2P04554 102 aa13□□□□□ -0.33
UBXN1-213ENST00000532904 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.99□□□□□ -0.33
UBXN1-213ENST00000532904 IGKV2-29A2NJV5 120 aaPredicted RBP12.99□□□□□ -0.33
UBXN1-213ENST00000532904 TIMM17BO60830 172 aa12.99□□□□□ -0.33
UBXN1-213ENST00000532904 DEFB114Q30KQ6 69 aa12.99□□□□□ -0.33
UBXN1-213ENST00000532904 DNAJC30Q96LL9 226 aa12.99□□□□□ -0.33
UBXN1-213ENST00000532904 LINC00467Q9BRT7 94 aa12.99□□□□□ -0.33
UBXN1-213ENST00000532904 AKAP9Q99996 3911 aa12.99□□□□□ -0.33
UBXN1-213ENST00000532904 A8MZ25 164 aa12.98□□□□□ -0.33
UBXN1-213ENST00000532904 TMEM61Q8N0U2 210 aa12.98□□□□□ -0.33
UBXN1-213ENST00000532904 DYNLRB2Q8TF09 96 aa12.98□□□□□ -0.33
UBXN1-213ENST00000532904 NDUFA7O95182 113 aa12.98□□□□□ -0.33
UBXN1-213ENST00000532904 GCN1Q92616 2671 aaKnown RBP12.98□□□□□ -0.33
UBXN1-213ENST00000532904 TRAV25A0A0B4J276 109 aa12.97□□□□□ -0.33
UBXN1-213ENST00000532904 IGHV3-53P01767 116 aa12.97□□□□□ -0.33
UBXN1-213ENST00000532904 TEX49A0A1B0GTD5 131 aa12.97□□□□□ -0.33
UBXN1-213ENST00000532904 CCL24O00175 119 aa12.97□□□□□ -0.33
UBXN1-213ENST00000532904 COX6CP09669 75 aa12.97□□□□□ -0.33
UBXN1-213ENST00000532904 IFITM1P13164 125 aa12.97□□□□□ -0.33
UBXN1-213ENST00000532904 C11orf72Q8NBR9 251 aa12.97□□□□□ -0.33
UBXN1-213ENST00000532904 UBE2WQ96B02 151 aa12.97□□□□□ -0.33
UBXN1-213ENST00000532904 SORL1Q92673 2214 aa12.96□□□□□ -0.33
UBXN1-213ENST00000532904 FASNP49327 2511 aaKnown RBP12.96□□□□□ -0.33
UBXN1-213ENST00000532904 NACAE9PAV3 2078 aa12.96□□□□□ -0.33
UBXN1-213ENST00000532904 TIRAPP58753 221 aa12.96□□□□□ -0.33
UBXN1-213ENST00000532904 BEAN1Q3B7T3 259 aa12.96□□□□□ -0.33
UBXN1-213ENST00000532904 ANK3Q12955 4377 aaKnown RBP12.96□□□□□ -0.34
UBXN1-213ENST00000532904 IGLV5-45A0A087WSX0 123 aa12.95□□□□□ -0.34
UBXN1-213ENST00000532904 H3BT86 120 aa12.95□□□□□ -0.34
UBXN1-213ENST00000532904 H7C423 109 aa12.95□□□□□ -0.34
UBXN1-213ENST00000532904 C2orf82Q6UX34 121 aa12.95□□□□□ -0.34
UBXN1-213ENST00000532904 CLUHP3Q96NS8 147 aa12.95□□□□□ -0.34
UBXN1-213ENST00000532904 TRAV8-4A0A0B4J246 113 aa12.95□□□□□ -0.34
UBXN1-213ENST00000532904 NPC2P61916 151 aa12.95□□□□□ -0.34
UBXN1-213ENST00000532904 ANAPC13Q9BS18 74 aa12.95□□□□□ -0.34
UBXN1-213ENST00000532904 NDUFA1O15239 70 aa12.94□□□□□ -0.34
UBXN1-213ENST00000532904 RS1O15537 224 aa12.94□□□□□ -0.34
UBXN1-213ENST00000532904 SNCGO76070 127 aa12.94□□□□□ -0.34
UBXN1-213ENST00000532904 CITED2Q99967 270 aaPredicted RBP12.94□□□□□ -0.34
UBXN1-213ENST00000532904 CDKN2A-AS1Q9UH64 79 aa12.94□□□□□ -0.34
UBXN1-213ENST00000532904 IGHV3-38A0A0C4DH36 116 aa12.93□□□□□ -0.34
UBXN1-213ENST00000532904 LINC01587Q99440 93 aa12.93□□□□□ -0.34
UBXN1-213ENST00000532904 LST1O00453 97 aa12.93□□□□□ -0.34
UBXN1-213ENST00000532904 MAP6D1Q9H9H5 199 aa12.93□□□□□ -0.34
UBXN1-213ENST00000532904 LY6G6DO95868 133 aa12.92□□□□□ -0.34
UBXN1-213ENST00000532904 TMEM101Q96IK0 257 aa12.92□□□□□ -0.34
UBXN1-213ENST00000532904 A0A1W2PRX2 142 aa12.92□□□□□ -0.34
UBXN1-213ENST00000532904 GAGE2BQ13066 116 aa12.92□□□□□ -0.34
UBXN1-213ENST00000532904 GAGE2EQ4V326 116 aa12.92□□□□□ -0.34
UBXN1-213ENST00000532904 C11orf44Q8N8P7 122 aa12.92□□□□□ -0.34
UBXN1-213ENST00000532904 CLEC2BQ92478 149 aa12.92□□□□□ -0.34
UBXN1-213ENST00000532904 GAGE2DQ9UEU5 116 aa12.92□□□□□ -0.34
UBXN1-213ENST00000532904 TRAV4A0A0B4J268 109 aa12.91□□□□□ -0.34
UBXN1-213ENST00000532904 CRLF1O75462 422 aa12.91□□□□□ -0.34
UBXN1-213ENST00000532904 SMR3AQ99954 134 aa12.91□□□□□ -0.34
UBXN1-213ENST00000532904 HIVEP2P31629 2446 aa12.91□□□□□ -0.34
UBXN1-213ENST00000532904 MTORP42345 2549 aa12.91□□□□□ -0.34
UBXN1-213ENST00000532904 HIST2H2BDQ6DRA6 164 aa12.9□□□□□ -0.34
UBXN1-213ENST00000532904 Q6Q795 121 aa12.9□□□□□ -0.34
UBXN1-213ENST00000532904 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.9□□□□□ -0.34
UBXN1-213ENST00000532904 INSP01308 110 aa12.9□□□□□ -0.34
UBXN1-213ENST00000532904 IGLV5-39A0A0G2JS06 123 aa12.89□□□□□ -0.35
UBXN1-213ENST00000532904 NHLRC4P0CG21 123 aaPredicted RBP12.89□□□□□ -0.35
UBXN1-213ENST00000532904 COX6A2Q02221 97 aa12.89□□□□□ -0.35
UBXN1-213ENST00000532904 CIRBPQ14011 172 aaKnown RBP12.89□□□□□ -0.35
UBXN1-213ENST00000532904 DEFB121Q5J5C9 76 aa12.89□□□□□ -0.35
UBXN1-213ENST00000532904 DAND5Q8N907 189 aa12.89□□□□□ -0.35
UBXN1-213ENST00000532904 HECTD1Q9ULT8 2610 aa12.88□□□□□ -0.35
UBXN1-213ENST00000532904 IGHV3OR16-12A0A075B7B8 117 aa12.88□□□□□ -0.35
UBXN1-213ENST00000532904 DGAT2L7PQ6IED9 249 aa12.88□□□□□ -0.35
UBXN1-213ENST00000532904 NF1P21359 2839 aa12.88□□□□□ -0.35
UBXN1-213ENST00000532904 HERVK_113P63121 156 aa12.87□□□□□ -0.35
UBXN1-213ENST00000532904 FAM19A3Q7Z5A8 133 aa12.87□□□□□ -0.35
UBXN1-213ENST00000532904 C15orf53Q8NAA6 179 aa12.87□□□□□ -0.35
UBXN1-213ENST00000532904 NDUFV3P56181 108 aaKnown RBP12.86□□□□□ -0.35
UBXN1-213ENST00000532904 MRPL23Q16540 153 aaKnown RBP12.86□□□□□ -0.35
UBXN1-213ENST00000532904 LINC00242Q5T6M2 205 aa12.86□□□□□ -0.35
UBXN1-213ENST00000532904 LINC00308Q8TCZ7 52 aa12.86□□□□□ -0.35
UBXN1-213ENST00000532904 ODF3L2Q3SX64 289 aa12.85□□□□□ -0.35
UBXN1-213ENST00000532904 FAM240AA0A1B0GVK7 77 aa12.85□□□□□ -0.35
UBXN1-213ENST00000532904 CMC4P56277 68 aaPredicted RBP12.85□□□□□ -0.35
UBXN1-213ENST00000532904 Q9H8V8 135 aa12.85□□□□□ -0.35
UBXN1-213ENST00000532904 GAGE5Q13069 117 aa12.84□□□□□ -0.35
UBXN1-213ENST00000532904 GAGE6Q13070 117 aa12.84□□□□□ -0.35
UBXN1-213ENST00000532904 WNK1Q9H4A3 2382 aa12.84□□□□□ -0.35
UBXN1-213ENST00000532904 IL17DQ8TAD2 202 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms