RNA–Protein interactions for RNA: ENST00000532451.1

SORL1-210, Transcript of sortilin related receptor 1, humanhuman

TSL 1 (best)

Gene SORL1, Length 2,165 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-210ENST00000532451 SPINK8P0C7L1 97 aa16.84■□□□□ 0.29
SORL1-210ENST00000532451 DAZ4Q86SG3 579 aaKnown RBP16.84■□□□□ 0.29
SORL1-210ENST00000532451 MUSTN1Q8IVN3 82 aa16.84■□□□□ 0.29
SORL1-210ENST00000532451 SMR3AQ99954 134 aa16.84■□□□□ 0.29
SORL1-210ENST00000532451 C1QTNF4Q9BXJ3 329 aa16.84■□□□□ 0.29
SORL1-210ENST00000532451 DAZ3Q9NR90 486 aaKnown RBP16.84■□□□□ 0.29
SORL1-210ENST00000532451 PRO1854Q9UHT4 67 aa16.84■□□□□ 0.29
SORL1-210ENST00000532451 SFTA2Q6UW10 78 aa16.84■□□□□ 0.29
SORL1-210ENST00000532451 NDUFA12Q9UI09 145 aa16.83■□□□□ 0.28
SORL1-210ENST00000532451 TIRAPP58753 221 aa16.82■□□□□ 0.28
SORL1-210ENST00000532451 LYRM7Q5U5X0 104 aa16.82■□□□□ 0.28
SORL1-210ENST00000532451 CSNK1G2-AS1Q8NCQ2 148 aa16.82■□□□□ 0.28
SORL1-210ENST00000532451 MTURNQ8N3F0 131 aa16.82■□□□□ 0.28
SORL1-210ENST00000532451 GAGE12JA6NER3 117 aa16.81■□□□□ 0.28
SORL1-210ENST00000532451 GAGE4Q13068 117 aa16.81■□□□□ 0.28
SORL1-210ENST00000532451 GAGE5Q13069 117 aa16.81■□□□□ 0.28
SORL1-210ENST00000532451 LITAFQ99732 161 aa16.81■□□□□ 0.28
SORL1-210ENST00000532451 IGLV5-45A0A087WSX0 123 aa16.81■□□□□ 0.28
SORL1-210ENST00000532451 LINC00694P0DN24 101 aa16.81■□□□□ 0.28
SORL1-210ENST00000532451 NTM-AS1Q6ZSK4 140 aa16.81■□□□□ 0.28
SORL1-210ENST00000532451 PSMB2P49721 201 aa16.8■□□□□ 0.28
SORL1-210ENST00000532451 CDKN2A-AS1Q9UH64 79 aa16.8■□□□□ 0.28
SORL1-210ENST00000532451 A8MZ25 164 aa16.79■□□□□ 0.28
SORL1-210ENST00000532451 EIF4EBP3O60516 100 aaPredicted RBP16.79■□□□□ 0.28
SORL1-210ENST00000532451 GAGE7O76087 117 aa16.79■□□□□ 0.28
SORL1-210ENST00000532451 GAGE12FP0CL80 117 aa16.79■□□□□ 0.28
SORL1-210ENST00000532451 GAGE12GP0CL81 117 aa16.79■□□□□ 0.28
SORL1-210ENST00000532451 GAGE12IP0CL82 117 aa16.79■□□□□ 0.28
SORL1-210ENST00000532451 ITPR2Q14571 2701 aa16.79■□□□□ 0.28
SORL1-210ENST00000532451 A0A0B4J2C4 111 aa16.79■□□□□ 0.28
SORL1-210ENST00000532451 TRGV2A0A075B6R0 118 aa16.78■□□□□ 0.28
SORL1-210ENST00000532451 KRTAP10-3P60369 221 aa16.78■□□□□ 0.28
SORL1-210ENST00000532451 SBSPONQ8IVN8 264 aa16.78■□□□□ 0.28
SORL1-210ENST00000532451 OVOL2Q9BRP0 275 aa16.78■□□□□ 0.28
SORL1-210ENST00000532451 CSDC2Q9Y534 153 aaKnown RBP16.78■□□□□ 0.28
SORL1-210ENST00000532451 ZFAND6Q6FIF0 208 aa16.78■□□□□ 0.28
SORL1-210ENST00000532451 SH2D6Q7Z4S9 175 aa16.78■□□□□ 0.28
SORL1-210ENST00000532451 MTORP42345 2549 aa16.77■□□□□ 0.28
SORL1-210ENST00000532451 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.77■□□□□ 0.28
SORL1-210ENST00000532451 ETDBQ3ZM63 59 aa16.77■□□□□ 0.28
SORL1-210ENST00000532451 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.77■□□□□ 0.27
SORL1-210ENST00000532451 SPANXDQ9BXN6 97 aa16.77■□□□□ 0.27
SORL1-210ENST00000532451 SPANXCQ9NY87 97 aa16.77■□□□□ 0.27
SORL1-210ENST00000532451 COX6A2Q02221 97 aa16.76■□□□□ 0.27
SORL1-210ENST00000532451 CIDEAO60543 219 aa16.75■□□□□ 0.27
SORL1-210ENST00000532451 IGHV3-33P01772 117 aa16.75■□□□□ 0.27
SORL1-210ENST00000532451 HERVK_113P63121 156 aa16.75■□□□□ 0.27
SORL1-210ENST00000532451 FAM19A3Q7Z5A8 133 aa16.75■□□□□ 0.27
SORL1-210ENST00000532451 SETD2Q9BYW2 2564 aaPredicted RBP16.75■□□□□ 0.27
SORL1-210ENST00000532451 ADAMTSL4-AS1Q5T5F5 129 aa16.75■□□□□ 0.27
SORL1-210ENST00000532451 LINC00242Q5T6M2 205 aa16.75■□□□□ 0.27
SORL1-210ENST00000532451 UNC79Q9P2D8 2635 aa16.75■□□□□ 0.27
SORL1-210ENST00000532451 TRBV20-1A0A075B6N2 111 aa16.74■□□□□ 0.27
SORL1-210ENST00000532451 PF4P02776 101 aa16.74■□□□□ 0.27
SORL1-210ENST00000532451 SMAGPQ0VAQ4 97 aa16.74■□□□□ 0.27
SORL1-210ENST00000532451 C21orf62-AS1Q17RA5 79 aa16.74■□□□□ 0.27
SORL1-210ENST00000532451 TMEM101Q96IK0 257 aa16.74■□□□□ 0.27
SORL1-210ENST00000532451 GTSF1LQ9H1H1 148 aa16.74■□□□□ 0.27
SORL1-210ENST00000532451 SETXQ7Z333 2677 aaKnown RBP16.74■□□□□ 0.27
SORL1-210ENST00000532451 TCL1BO95988 128 aa16.74■□□□□ 0.27
SORL1-210ENST00000532451 TRBV6-4A0A1B0GX49 114 aa16.73■□□□□ 0.27
SORL1-210ENST00000532451 LY6G6DO95868 133 aa16.73■□□□□ 0.27
SORL1-210ENST00000532451 ERG28Q9UKR5 140 aa16.73■□□□□ 0.27
SORL1-210ENST00000532451 MIAQ16674 131 aa16.72■□□□□ 0.27
SORL1-210ENST00000532451 LINC00482Q8N8I6 264 aa16.72■□□□□ 0.27
SORL1-210ENST00000532451 HELZ2Q9BYK8 2649 aaKnown RBP16.72■□□□□ 0.27
SORL1-210ENST00000532451 PRSS2P07478 247 aa16.72■□□□□ 0.27
SORL1-210ENST00000532451 SCGB1C2P0DMR2 95 aa16.72■□□□□ 0.27
SORL1-210ENST00000532451 SMCPP49901 116 aaPredicted RBP16.72■□□□□ 0.27
SORL1-210ENST00000532451 CDC42SE2Q9NRR3 84 aa16.72■□□□□ 0.27
SORL1-210ENST00000532451 LOC100131303A0A0U1RQF7 123 aa16.71■□□□□ 0.27
SORL1-210ENST00000532451 TMEM243Q9BU79 118 aa16.71■□□□□ 0.27
SORL1-210ENST00000532451 NDUFA1O15239 70 aa16.71■□□□□ 0.27
SORL1-210ENST00000532451 NIPBLQ6KC79 2804 aaeCLIP16.71■□□□□ 0.26
SORL1-210ENST00000532451 TRGV4A0A0C4DH28 118 aa16.7■□□□□ 0.26
SORL1-210ENST00000532451 IGLV5-39A0A0G2JS06 123 aa16.7■□□□□ 0.26
SORL1-210ENST00000532451 J3QR89 54 aa16.7■□□□□ 0.26
SORL1-210ENST00000532451 TIMM17BO60830 172 aa16.7■□□□□ 0.26
SORL1-210ENST00000532451 TRAV13-1A0A0B4J241 112 aa16.7■□□□□ 0.26
SORL1-210ENST00000532451 UBE2L6O14933 153 aa16.7■□□□□ 0.26
SORL1-210ENST00000532451 H7C2G1 150 aa16.68■□□□□ 0.26
SORL1-210ENST00000532451 JMJD1CQ15652 2540 aa16.68■□□□□ 0.26
SORL1-210ENST00000532451 HIVEP2P31629 2446 aa16.67■□□□□ 0.26
SORL1-210ENST00000532451 FHL2Q14192 279 aa16.67■□□□□ 0.26
SORL1-210ENST00000532451 SMIM1B2RUZ4 78 aa16.66■□□□□ 0.26
SORL1-210ENST00000532451 H7C423 109 aa16.65■□□□□ 0.26
SORL1-210ENST00000532451 Q1RN00 199 aa16.65■□□□□ 0.26
SORL1-210ENST00000532451 ATP6V0E2Q8NHE4 81 aa16.65■□□□□ 0.26
SORL1-210ENST00000532451 NPC2P61916 151 aa16.64■□□□□ 0.25
SORL1-210ENST00000532451 FASNP49327 2511 aaKnown RBP16.64■□□□□ 0.25
SORL1-210ENST00000532451 IFITM1P13164 125 aa16.64■□□□□ 0.25
SORL1-210ENST00000532451 RNF183Q96D59 192 aa16.64■□□□□ 0.25
SORL1-210ENST00000532451 Q9H8V8 135 aa16.64■□□□□ 0.25
SORL1-210ENST00000532451 NOTCH3Q9UM47 2321 aa16.63■□□□□ 0.25
SORL1-210ENST00000532451 INSL3P51460 131 aa16.62■□□□□ 0.25
SORL1-210ENST00000532451 CRLF1O75462 422 aa16.62■□□□□ 0.25
SORL1-210ENST00000532451 CIRBPQ14011 172 aaKnown RBP16.62■□□□□ 0.25
SORL1-210ENST00000532451 F5H768 121 aa16.61■□□□□ 0.25
SORL1-210ENST00000532451 KIR2DL5BQ8NHK3 375 aa16.61■□□□□ 0.25
SORL1-210ENST00000532451 DAND5Q8N907 189 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms