RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 DEFB1P60022 68 aa-1.17□□□□□ -2.6
ATM-217ENST00000531957 ATP6V0E2Q8NHE4 81 aa-1.17□□□□□ -2.6
ATM-217ENST00000531957 SMIM4Q8WVI0 70 aa-1.17□□□□□ -2.6
ATM-217ENST00000531957 APLNQ9ULZ1 77 aa-1.17□□□□□ -2.6
ATM-217ENST00000531957 SLIT1O75093 1534 aa-1.17□□□□□ -2.6
ATM-217ENST00000531957 LRBAP50851 2863 aa-1.17□□□□□ -2.6
ATM-217ENST00000531957 PAPPA2Q9BXP8 1791 aa-1.17□□□□□ -2.6
ATM-217ENST00000531957 GOLGA4Q13439 2230 aaKnown RBP-1.17□□□□□ -2.6
ATM-217ENST00000531957 UHRF1BP1LA0JNW5 1464 aa-1.18□□□□□ -2.6
ATM-217ENST00000531957 DNAH17Q9UFH2 4485 aa-1.18□□□□□ -2.6
ATM-217ENST00000531957 KIAA0556O60303 1618 aa-1.18□□□□□ -2.6
ATM-217ENST00000531957 CPSF4LA6NMK7 179 aaKnown RBP-1.18□□□□□ -2.6
ATM-217ENST00000531957 YPEL1O60688 119 aa-1.18□□□□□ -2.6
ATM-217ENST00000531957 SMIM24O75264 130 aa-1.18□□□□□ -2.6
ATM-217ENST00000531957 PIPP12273 146 aaPredicted RBP-1.18□□□□□ -2.6
ATM-217ENST00000531957 TMEM35BQ8NCS4 154 aa-1.18□□□□□ -2.6
ATM-217ENST00000531957 PCBD2Q9H0N5 130 aa-1.18□□□□□ -2.6
ATM-217ENST00000531957 LRRC37A3O60309 1634 aa-1.18□□□□□ -2.6
ATM-217ENST00000531957 ZCCHC11Q5TAX3 1644 aaKnown RBP-1.18□□□□□ -2.6
ATM-217ENST00000531957 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.19□□□□□ -2.6
ATM-217ENST00000531957 ROCK1Q13464 1354 aa-1.19□□□□□ -2.6
ATM-217ENST00000531957 TRBV7-4A0A0J9YYF1 115 aa-1.19□□□□□ -2.6
ATM-217ENST00000531957 MT1EP04732 61 aa-1.19□□□□□ -2.6
ATM-217ENST00000531957 PAEPP09466 180 aa-1.19□□□□□ -2.6
ATM-217ENST00000531957 PIRTP0C851 137 aa-1.19□□□□□ -2.6
ATM-217ENST00000531957 UBE2D1P51668 147 aa-1.19□□□□□ -2.6
ATM-217ENST00000531957 CCL18P55774 89 aa-1.19□□□□□ -2.6
ATM-217ENST00000531957 Q6JHZ5 121 aa-1.19□□□□□ -2.6
ATM-217ENST00000531957 USMG5Q96IX5 58 aa-1.19□□□□□ -2.6
ATM-217ENST00000531957 NAA60Q9H7X0 242 aa-1.19□□□□□ -2.6
ATM-217ENST00000531957 PXDNQ92626 1479 aa-1.19□□□□□ -2.6
ATM-217ENST00000531957 CFAP46Q8IYW2 2715 aa-1.2□□□□□ -2.6
ATM-217ENST00000531957 J3QLW9 94 aa-1.2□□□□□ -2.6
ATM-217ENST00000531957 G0S2P27469 103 aa-1.2□□□□□ -2.6
ATM-217ENST00000531957 AMELXQ99217 191 aa-1.2□□□□□ -2.6
ATM-217ENST00000531957 DNAJC15Q9Y5T4 150 aa-1.2□□□□□ -2.6
ATM-217ENST00000531957 CICQ96RK0 1608 aaPredicted RBP-1.2□□□□□ -2.6
ATM-217ENST00000531957 POLA1P09884 1462 aaPredicted RBP-1.2□□□□□ -2.6
ATM-217ENST00000531957 HMGXB3Q12766 1538 aa-1.2□□□□□ -2.6
ATM-217ENST00000531957 FMN2Q9NZ56 1722 aa-1.2□□□□□ -2.6
ATM-217ENST00000531957 FAM186AA6NE01 2351 aa-1.21□□□□□ -2.6
ATM-217ENST00000531957 MYOM3Q5VTT5 1437 aa-1.21□□□□□ -2.6
ATM-217ENST00000531957 ANKRD50Q9ULJ7 1429 aa-1.21□□□□□ -2.6
ATM-217ENST00000531957 LINC00959A0A1B0GUT2 108 aa-1.21□□□□□ -2.6
ATM-217ENST00000531957 FAM92AA1XBS5 289 aa-1.21□□□□□ -2.6
ATM-217ENST00000531957 SYS1-DBNDD2H3BUS1 97 aa-1.21□□□□□ -2.6
ATM-217ENST00000531957 M0R135 149 aa-1.21□□□□□ -2.6
ATM-217ENST00000531957 DPM2O94777 84 aa-1.21□□□□□ -2.6
ATM-217ENST00000531957 C9orf116Q5BN46 136 aaPredicted RBP-1.21□□□□□ -2.6
ATM-217ENST00000531957 CLLU1Q5K131 121 aa-1.21□□□□□ -2.6
ATM-217ENST00000531957 SAMD13Q5VXD3 122 aa-1.21□□□□□ -2.6
ATM-217ENST00000531957 ATP11AUNQ6ZP68 121 aa-1.21□□□□□ -2.6
ATM-217ENST00000531957 BANF2Q9H503 90 aa-1.21□□□□□ -2.6
ATM-217ENST00000531957 DNAH5Q8TE73 4624 aa-1.21□□□□□ -2.6
ATM-217ENST00000531957 DNAH10Q8IVF4 4471 aa-1.21□□□□□ -2.6
ATM-217ENST00000531957 MUC22E2RYF6 1773 aaPredicted RBP-1.21□□□□□ -2.6
ATM-217ENST00000531957 SETBP1Q9Y6X0 1596 aa-1.21□□□□□ -2.6
ATM-217ENST00000531957 SBF2Q86WG5 1849 aa-1.22□□□□□ -2.6
ATM-217ENST00000531957 ZNF236Q9UL36 1845 aa-1.22□□□□□ -2.6
ATM-217ENST00000531957 ACACBO00763 2458 aa-1.22□□□□□ -2.6
ATM-217ENST00000531957 MAGI1Q96QZ7 1491 aaPredicted RBP-1.22□□□□□ -2.6
ATM-217ENST00000531957 SHANK2Q9UPX8 1470 aa-1.22□□□□□ -2.6
ATM-217ENST00000531957 E5RI56 91 aa-1.22□□□□□ -2.6
ATM-217ENST00000531957 F8VRH5 84 aa-1.22□□□□□ -2.6
ATM-217ENST00000531957 SSSCA1O60232 199 aa-1.22□□□□□ -2.6
ATM-217ENST00000531957 MT-ND4LP03901 98 aa-1.22□□□□□ -2.6
ATM-217ENST00000531957 HLA-DRB4P13762 266 aa-1.22□□□□□ -2.6
ATM-217ENST00000531957 UBE2D3P61077 147 aa-1.22□□□□□ -2.6
ATM-217ENST00000531957 UBE2D2P62837 147 aa-1.22□□□□□ -2.6
ATM-217ENST00000531957 COX17Q14061 63 aa-1.22□□□□□ -2.6
ATM-217ENST00000531957 Q6AWC8 147 aa-1.22□□□□□ -2.6
ATM-217ENST00000531957 ZNF818PQ6ZRF7 136 aa-1.22□□□□□ -2.6
ATM-217ENST00000531957 MT1LQ93083 61 aa-1.22□□□□□ -2.6
ATM-217ENST00000531957 NDUFA4L2Q9NRX3 87 aa-1.22□□□□□ -2.6
ATM-217ENST00000531957 R4GMQ9 66 aa-1.22□□□□□ -2.6
ATM-217ENST00000531957 HLA-DRB4X5D2U9 266 aa-1.22□□□□□ -2.6
ATM-217ENST00000531957 DMXL2Q8TDJ6 3036 aa-1.22□□□□□ -2.61
ATM-217ENST00000531957 PRDM2Q13029 1718 aa-1.23□□□□□ -2.61
ATM-217ENST00000531957 MAP3K1Q13233 1512 aa-1.23□□□□□ -2.61
ATM-217ENST00000531957 MT1BP07438 61 aa-1.23□□□□□ -2.61
ATM-217ENST00000531957 KRTAP20-1Q3LI63 56 aa-1.23□□□□□ -2.61
ATM-217ENST00000531957 TMEM170BQ5T4T1 132 aa-1.23□□□□□ -2.61
ATM-217ENST00000531957 OR8I2Q8N0Y5 310 aa-1.23□□□□□ -2.61
ATM-217ENST00000531957 MT1MQ8N339 61 aa-1.23□□□□□ -2.61
ATM-217ENST00000531957 C10orf82Q8WW14 230 aa-1.23□□□□□ -2.61
ATM-217ENST00000531957 NKTRP30414 1462 aaKnown RBP-1.24□□□□□ -2.61
ATM-217ENST00000531957 RAPGEF6Q8TEU7 1601 aa-1.24□□□□□ -2.61
ATM-217ENST00000531957 CTXND1A0A1B0GTU2 59 aa-1.24□□□□□ -2.61
ATM-217ENST00000531957 ALX1Q15699 326 aa-1.24□□□□□ -2.61
ATM-217ENST00000531957 TMEM128Q5BJH2 165 aa-1.24□□□□□ -2.61
ATM-217ENST00000531957 LINC01545Q5VT33 79 aa-1.24□□□□□ -2.61
ATM-217ENST00000531957 Q8N8P6 123 aa-1.24□□□□□ -2.61
ATM-217ENST00000531957 NDUFA12Q9UI09 145 aa-1.24□□□□□ -2.61
ATM-217ENST00000531957 PATJQ8NI35 1801 aa-1.24□□□□□ -2.61
ATM-217ENST00000531957 OVOS2A0A0G2JMS6 1433 aa-1.24□□□□□ -2.61
ATM-217ENST00000531957 ARHGEF12Q9NZN5 1544 aa-1.25□□□□□ -2.61
ATM-217ENST00000531957 ADGRG4Q8IZF6 3080 aa-1.25□□□□□ -2.61
ATM-217ENST00000531957 UQCR11O14957 56 aa-1.25□□□□□ -2.61
ATM-217ENST00000531957 ARPC5O15511 151 aa-1.25□□□□□ -2.61
ATM-217ENST00000531957 PPP1R17O96001 155 aa-1.25□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms