RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 H3BQF6 201 aa1.67□□□□□ -2.14
AC055878.1-201ENST00000531858 ACYP2P14621 99 aa1.67□□□□□ -2.14
AC055878.1-201ENST00000531858 FXYD6P3P58550 94 aa1.67□□□□□ -2.14
AC055878.1-201ENST00000531858 RPL37P61927 97 aaKnown RBP1.67□□□□□ -2.14
AC055878.1-201ENST00000531858 HMGN3Q15651 99 aa1.67□□□□□ -2.14
AC055878.1-201ENST00000531858 SMIM11BQ8TCY0 68 aa1.67□□□□□ -2.14
AC055878.1-201ENST00000531858 LINC01600Q96MT4 127 aa1.67□□□□□ -2.14
AC055878.1-201ENST00000531858 ARL2-SNX15V9GYD0 113 aa1.67□□□□□ -2.14
AC055878.1-201ENST00000531858 ZGRF1Q86YA3 2104 aa1.67□□□□□ -2.14
AC055878.1-201ENST00000531858 CDK13Q14004 1512 aaKnown RBP1.66□□□□□ -2.14
AC055878.1-201ENST00000531858 TOP2BQ02880 1626 aa1.66□□□□□ -2.14
AC055878.1-201ENST00000531858 KIAA0100Q14667 2235 aaKnown RBP1.66□□□□□ -2.14
AC055878.1-201ENST00000531858 TRAV1-2A0A0B4J238 106 aa1.66□□□□□ -2.14
AC055878.1-201ENST00000531858 CTXND1A0A1B0GTU2 59 aa1.66□□□□□ -2.14
AC055878.1-201ENST00000531858 MGPP08493 103 aa1.66□□□□□ -2.14
AC055878.1-201ENST00000531858 KRTAP12-4P60329 112 aa1.66□□□□□ -2.14
AC055878.1-201ENST00000531858 ZNF720Q7Z2F6 126 aa1.66□□□□□ -2.14
AC055878.1-201ENST00000531858 PLAC4Q8WY50 150 aa1.66□□□□□ -2.14
AC055878.1-201ENST00000531858 EDC4Q6P2E9 1401 aaKnown RBP1.66□□□□□ -2.14
AC055878.1-201ENST00000531858 PLXNA1Q9UIW2 1896 aa1.65□□□□□ -2.14
AC055878.1-201ENST00000531858 NLRP1Q9C000 1473 aa1.65□□□□□ -2.15
AC055878.1-201ENST00000531858 LYNX1P0DP58 116 aa1.65□□□□□ -2.15
AC055878.1-201ENST00000531858 ZNF137PP52743 207 aa1.65□□□□□ -2.15
AC055878.1-201ENST00000531858 FAM223AQ8IWN6 122 aa1.65□□□□□ -2.15
AC055878.1-201ENST00000531858 MYH8P13535 1937 aa1.65□□□□□ -2.15
AC055878.1-201ENST00000531858 SBF2Q86WG5 1849 aa1.65□□□□□ -2.15
AC055878.1-201ENST00000531858 DOCK1Q14185 1865 aa1.65□□□□□ -2.15
AC055878.1-201ENST00000531858 SIPA1L3O60292 1781 aaPredicted RBP1.64□□□□□ -2.15
AC055878.1-201ENST00000531858 COL4A6Q14031 1691 aa1.64□□□□□ -2.15
AC055878.1-201ENST00000531858 ZNF815PA8K554 130 aa1.64□□□□□ -2.15
AC055878.1-201ENST00000531858 K7EIL1 84 aa1.64□□□□□ -2.15
AC055878.1-201ENST00000531858 TDRG1Q3Y452 100 aa1.64□□□□□ -2.15
AC055878.1-201ENST00000531858 PSMG4Q5JS54 123 aa1.64□□□□□ -2.15
AC055878.1-201ENST00000531858 LINC00846Q9NV44 126 aa1.64□□□□□ -2.15
AC055878.1-201ENST00000531858 CACNA1BQ00975 2339 aa1.64□□□□□ -2.15
AC055878.1-201ENST00000531858 ZMYM4Q5VZL5 1548 aa1.64□□□□□ -2.15
AC055878.1-201ENST00000531858 ERVK-7P63135 1459 aa1.63□□□□□ -2.15
AC055878.1-201ENST00000531858 GVQW2A0A096LPI5 108 aaPredicted RBP1.63□□□□□ -2.15
AC055878.1-201ENST00000531858 FAM223BA6NKX1 122 aa1.63□□□□□ -2.15
AC055878.1-201ENST00000531858 PIN1P1O15428 100 aa1.63□□□□□ -2.15
AC055878.1-201ENST00000531858 ARL14EPLP0DKL9 152 aa1.63□□□□□ -2.15
AC055878.1-201ENST00000531858 SNRPFP62306 86 aaKnown RBP1.63□□□□□ -2.15
AC055878.1-201ENST00000531858 SPRR4Q96PI1 79 aa1.63□□□□□ -2.15
AC055878.1-201ENST00000531858 HIGD1BQ9P298 99 aa1.63□□□□□ -2.15
AC055878.1-201ENST00000531858 INTS1Q8N201 2190 aaKnown RBP1.63□□□□□ -2.15
AC055878.1-201ENST00000531858 ARHGEF5Q12774 1597 aa1.63□□□□□ -2.15
AC055878.1-201ENST00000531858 POLA1P09884 1462 aaPredicted RBP1.63□□□□□ -2.15
AC055878.1-201ENST00000531858 CHD3Q12873 2000 aaKnown RBP1.62□□□□□ -2.15
AC055878.1-201ENST00000531858 KDM5DQ9BY66 1539 aa1.62□□□□□ -2.15
AC055878.1-201ENST00000531858 AFDNP55196 1824 aaKnown RBP1.62□□□□□ -2.15
AC055878.1-201ENST00000531858 A0A1B0GWA3 101 aa1.62□□□□□ -2.15
AC055878.1-201ENST00000531858 PRB1P04280 392 aa1.62□□□□□ -2.15
AC055878.1-201ENST00000531858 ACYP1P07311 99 aa1.62□□□□□ -2.15
AC055878.1-201ENST00000531858 KRTAP12-3P60328 96 aa1.62□□□□□ -2.15
AC055878.1-201ENST00000531858 CFAP126Q5VTH2 177 aa1.62□□□□□ -2.15
AC055878.1-201ENST00000531858 SFTA2Q6UW10 78 aa1.62□□□□□ -2.15
AC055878.1-201ENST00000531858 ALKAL2Q6UX46 152 aa1.62□□□□□ -2.15
AC055878.1-201ENST00000531858 PRDM2Q13029 1718 aa1.62□□□□□ -2.15
AC055878.1-201ENST00000531858 MED12Q93074 2177 aa1.62□□□□□ -2.15
AC055878.1-201ENST00000531858 MED13Q9UHV7 2174 aa1.62□□□□□ -2.15
AC055878.1-201ENST00000531858 NRXN1Q9ULB1 1477 aa1.62□□□□□ -2.15
AC055878.1-201ENST00000531858 PARP14Q460N5 1801 aa1.61□□□□□ -2.15
AC055878.1-201ENST00000531858 MAP3K1Q13233 1512 aa1.61□□□□□ -2.15
AC055878.1-201ENST00000531858 KANTRA0A1W2PQU2 76 aa1.61□□□□□ -2.15
AC055878.1-201ENST00000531858 C10orf142B7Z368 130 aa1.61□□□□□ -2.15
AC055878.1-201ENST00000531858 ADIRFQ15847 76 aa1.61□□□□□ -2.15
AC055878.1-201ENST00000531858 ETDBQ3ZM63 59 aa1.61□□□□□ -2.15
AC055878.1-201ENST00000531858 Q6ZRX8 168 aa1.61□□□□□ -2.15
AC055878.1-201ENST00000531858 ST20Q9HBF5 79 aa1.61□□□□□ -2.15
AC055878.1-201ENST00000531858 SPCS1Q9Y6A9 102 aa1.61□□□□□ -2.15
AC055878.1-201ENST00000531858 CLTCQ00610 1675 aaKnown RBP1.61□□□□□ -2.15
AC055878.1-201ENST00000531858 PROK2Q9HC23 129 aa1.6□□□□□ -2.15
AC055878.1-201ENST00000531858 DOCK2Q92608 1830 aa1.6□□□□□ -2.15
AC055878.1-201ENST00000531858 MON2Q7Z3U7 1717 aa1.6□□□□□ -2.15
AC055878.1-201ENST00000531858 CASP8AP2Q9UKL3 1982 aa1.59□□□□□ -2.15
AC055878.1-201ENST00000531858 MYO3AQ8NEV4 1616 aa1.59□□□□□ -2.15
AC055878.1-201ENST00000531858 RAPGEF6Q8TEU7 1601 aa1.59□□□□□ -2.15
AC055878.1-201ENST00000531858 TANC1Q9C0D5 1861 aa1.59□□□□□ -2.15
AC055878.1-201ENST00000531858 LY6G6CO95867 125 aa1.59□□□□□ -2.15
AC055878.1-201ENST00000531858 HMGN2P05204 90 aaKnown RBP1.59□□□□□ -2.15
AC055878.1-201ENST00000531858 Q6ZSA8 131 aa1.59□□□□□ -2.15
AC055878.1-201ENST00000531858 LINC00643Q86TS7 51 aa1.59□□□□□ -2.15
AC055878.1-201ENST00000531858 TMEM263Q8WUH6 116 aaKnown RBP1.59□□□□□ -2.15
AC055878.1-201ENST00000531858 LINC00472Q9H8W2 130 aa1.59□□□□□ -2.15
AC055878.1-201ENST00000531858 PRRC2BQ5JSZ5 2229 aaKnown RBP1.59□□□□□ -2.16
AC055878.1-201ENST00000531858 ABCA4P78363 2273 aa1.59□□□□□ -2.16
AC055878.1-201ENST00000531858 MAP3K4Q9Y6R4 1608 aa1.58□□□□□ -2.16
AC055878.1-201ENST00000531858 LRRC9Q6ZRR7 1453 aa1.58□□□□□ -2.16
AC055878.1-201ENST00000531858 DCAF1Q9Y4B6 1507 aa1.58□□□□□ -2.16
AC055878.1-201ENST00000531858 GCHFRP30047 84 aa1.58□□□□□ -2.16
AC055878.1-201ENST00000531858 KIF14Q15058 1648 aa1.58□□□□□ -2.16
AC055878.1-201ENST00000531858 TRIOBPQ9H2D6 2365 aa1.57□□□□□ -2.16
AC055878.1-201ENST00000531858 SNRNP200O75643 2136 aaKnown RBP1.57□□□□□ -2.16
AC055878.1-201ENST00000531858 KCPQ6ZWJ8 1503 aa1.57□□□□□ -2.16
AC055878.1-201ENST00000531858 C7orf77A4D0Y5 90 aa1.57□□□□□ -2.16
AC055878.1-201ENST00000531858 ARMS2P0C7Q2 107 aa1.57□□□□□ -2.16
AC055878.1-201ENST00000531858 NMSQ5H8A3 153 aa1.57□□□□□ -2.16
AC055878.1-201ENST00000531858 PRR15LQ9BU68 103 aa1.57□□□□□ -2.16
AC055878.1-201ENST00000531858 MUC19Q7Z5P9 8384 aa1.57□□□□□ -2.16
AC055878.1-201ENST00000531858 CUX1P39880 1505 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms