RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 Q6ZSA8 131 aa11.99□□□□□ -0.49
SCN4B-205ENST00000531550 SH2D6Q7Z4S9 175 aa11.99□□□□□ -0.49
SCN4B-205ENST00000531550 DAZ4Q86SG3 579 aaKnown RBP11.99□□□□□ -0.49
SCN4B-205ENST00000531550 BAGE3Q86Y29 109 aa11.99□□□□□ -0.49
SCN4B-205ENST00000531550 DAZ3Q9NR90 486 aaKnown RBP11.99□□□□□ -0.49
SCN4B-205ENST00000531550 LRP1Q07954 4544 aaKnown RBP11.99□□□□□ -0.49
SCN4B-205ENST00000531550 LINC01546A6NGU7 62 aa11.98□□□□□ -0.49
SCN4B-205ENST00000531550 IBA57-AS1B1ANH7 110 aa11.98□□□□□ -0.49
SCN4B-205ENST00000531550 K7EMI3 77 aa11.98□□□□□ -0.49
SCN4B-205ENST00000531550 LINC01556Q5JQF7 62 aa11.98□□□□□ -0.49
SCN4B-205ENST00000531550 NIT1Q86X76 327 aa11.98□□□□□ -0.49
SCN4B-205ENST00000531550 Q9HAA7 133 aa11.98□□□□□ -0.49
SCN4B-205ENST00000531550 FAT3Q8TDW7 4589 aa11.97□□□□□ -0.49
SCN4B-205ENST00000531550 TCAPO15273 167 aa11.97□□□□□ -0.49
SCN4B-205ENST00000531550 LINC00614P0C842 121 aa11.97□□□□□ -0.49
SCN4B-205ENST00000531550 URB1-AS1Q96HZ7 61 aa11.97□□□□□ -0.49
SCN4B-205ENST00000531550 NDUFA6P56556 154 aa11.96□□□□□ -0.49
SCN4B-205ENST00000531550 TIRAPP58753 221 aa11.96□□□□□ -0.49
SCN4B-205ENST00000531550 FA2HQ7L5A8 372 aa11.96□□□□□ -0.49
SCN4B-205ENST00000531550 ATP6V0E2Q8NHE4 81 aa11.96□□□□□ -0.49
SCN4B-205ENST00000531550 CHCHD1Q96BP2 118 aaKnown RBP11.96□□□□□ -0.49
SCN4B-205ENST00000531550 KIR2DL4Q99706 377 aa11.96□□□□□ -0.49
SCN4B-205ENST00000531550 TMEM97Q5BJF2 176 aa11.95□□□□□ -0.5
SCN4B-205ENST00000531550 TSHBP01222 138 aa11.94□□□□□ -0.5
SCN4B-205ENST00000531550 LINC00310P59036 64 aa11.94□□□□□ -0.5
SCN4B-205ENST00000531550 COTL1Q14019 142 aa11.94□□□□□ -0.5
SCN4B-205ENST00000531550 GTSF1LQ9H1H1 148 aa11.94□□□□□ -0.5
SCN4B-205ENST00000531550 AP5S1Q9NUS5 200 aa11.94□□□□□ -0.5
SCN4B-205ENST00000531550 SERF1AO75920 110 aa11.93□□□□□ -0.5
SCN4B-205ENST00000531550 S100A6P06703 90 aa11.93□□□□□ -0.5
SCN4B-205ENST00000531550 ESDP10768 282 aa11.93□□□□□ -0.5
SCN4B-205ENST00000531550 WFDC2Q14508 124 aa11.93□□□□□ -0.5
SCN4B-205ENST00000531550 LAGE3Q14657 143 aa11.93□□□□□ -0.5
SCN4B-205ENST00000531550 ORMDL2Q53FV1 153 aa11.93□□□□□ -0.5
SCN4B-205ENST00000531550 RNASEKQ6P5S7 137 aaKnown RBP11.93□□□□□ -0.5
SCN4B-205ENST00000531550 FCER1GP30273 86 aa11.92□□□□□ -0.5
SCN4B-205ENST00000531550 TRAV8-6A0A0B4J262 113 aa11.91□□□□□ -0.5
SCN4B-205ENST00000531550 NUPR1O60356 82 aa11.91□□□□□ -0.5
SCN4B-205ENST00000531550 IGHV3-30P01768 117 aa11.91□□□□□ -0.5
SCN4B-205ENST00000531550 IGHV3-33P01772 117 aa11.91□□□□□ -0.5
SCN4B-205ENST00000531550 IGHV3-30-3P0DP02 117 aa11.91□□□□□ -0.5
SCN4B-205ENST00000531550 IGHV3-30-5P0DP03 117 aa11.91□□□□□ -0.5
SCN4B-205ENST00000531550 PLA2G2DQ9UNK4 145 aa11.91□□□□□ -0.5
SCN4B-205ENST00000531550 TMA7Q9Y2S6 64 aaKnown RBP11.91□□□□□ -0.5
SCN4B-205ENST00000531550 PKHD1L1Q86WI1 4243 aa11.91□□□□□ -0.5
SCN4B-205ENST00000531550 HSBP1O75506 76 aa11.9□□□□□ -0.5
SCN4B-205ENST00000531550 G0S2P27469 103 aa11.9□□□□□ -0.5
SCN4B-205ENST00000531550 KRTAP10-4P60372 401 aaPredicted RBP11.9□□□□□ -0.5
SCN4B-205ENST00000531550 NTM-AS1Q6ZSK4 140 aa11.9□□□□□ -0.5
SCN4B-205ENST00000531550 SCXQ7RTU7 201 aa11.9□□□□□ -0.5
SCN4B-205ENST00000531550 TRBV6-8A0A0A6YYG3 113 aa11.89□□□□□ -0.51
SCN4B-205ENST00000531550 OXTP01178 125 aa11.89□□□□□ -0.51
SCN4B-205ENST00000531550 TM2D2Q9BX73 214 aa11.89□□□□□ -0.51
SCN4B-205ENST00000531550 IGHV1-24A0A0C4DH33 117 aa11.88□□□□□ -0.51
SCN4B-205ENST00000531550 AMTP48728 403 aa11.88□□□□□ -0.51
SCN4B-205ENST00000531550 CHCHD7Q9BUK0 85 aa11.88□□□□□ -0.51
SCN4B-205ENST00000531550 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.87□□□□□ -0.51
SCN4B-205ENST00000531550 TRBV25-1A0A075B6N4 114 aa11.87□□□□□ -0.51
SCN4B-205ENST00000531550 C5orf52A6NGY3 159 aa11.87□□□□□ -0.51
SCN4B-205ENST00000531550 LINC01549A6NIU2 74 aa11.87□□□□□ -0.51
SCN4B-205ENST00000531550 LECT2O14960 151 aa11.87□□□□□ -0.51
SCN4B-205ENST00000531550 LELP1Q5T871 98 aa11.87□□□□□ -0.51
SCN4B-205ENST00000531550 C20orf203Q8NBC4 194 aa11.87□□□□□ -0.51
SCN4B-205ENST00000531550 A0A096LNJ9 63 aa11.86□□□□□ -0.51
SCN4B-205ENST00000531550 SNRPEP62304 92 aaKnown RBP11.86□□□□□ -0.51
SCN4B-205ENST00000531550 TMEM18Q96B42 140 aa11.86□□□□□ -0.51
SCN4B-205ENST00000531550 H7C423 109 aa11.85□□□□□ -0.51
SCN4B-205ENST00000531550 HBDP02042 147 aa11.85□□□□□ -0.51
SCN4B-205ENST00000531550 LINC01620Q4KN68 170 aa11.85□□□□□ -0.51
SCN4B-205ENST00000531550 TMEM243Q9BU79 118 aa11.85□□□□□ -0.51
SCN4B-205ENST00000531550 C2orf66Q6UXQ4 117 aa11.84□□□□□ -0.51
SCN4B-205ENST00000531550 HIST3H2BBQ8N257 126 aa11.84□□□□□ -0.51
SCN4B-205ENST00000531550 FAM19A2Q8N3H0 131 aa11.84□□□□□ -0.51
SCN4B-205ENST00000531550 Q8N3U1 123 aa11.84□□□□□ -0.51
SCN4B-205ENST00000531550 TOMM6Q96B49 74 aa11.84□□□□□ -0.51
SCN4B-205ENST00000531550 PACRGQ96M98 296 aaPredicted RBP11.84□□□□□ -0.51
SCN4B-205ENST00000531550 CYSLTR1Q9Y271 337 aa11.84□□□□□ -0.51
SCN4B-205ENST00000531550 PMCHL1Q16048 86 aa11.83□□□□□ -0.52
SCN4B-205ENST00000531550 SMAGPQ0VAQ4 97 aa11.82□□□□□ -0.52
SCN4B-205ENST00000531550 PDZD11Q5EBL8 140 aa11.82□□□□□ -0.52
SCN4B-205ENST00000531550 CHAC1Q9BUX1 264 aa11.82□□□□□ -0.52
SCN4B-205ENST00000531550 TIMM21Q9BVV7 248 aa11.82□□□□□ -0.52
SCN4B-205ENST00000531550 TRAV8-3A0A0A6YYJ7 113 aa11.81□□□□□ -0.52
SCN4B-205ENST00000531550 RPL39P62891 51 aaKnown RBP11.81□□□□□ -0.52
SCN4B-205ENST00000531550 PYGO1Q9Y3Y4 419 aa11.81□□□□□ -0.52
SCN4B-205ENST00000531550 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.8□□□□□ -0.52
SCN4B-205ENST00000531550 IGKV2-29A2NJV5 120 aaPredicted RBP11.8□□□□□ -0.52
SCN4B-205ENST00000531550 UBE2L6O14933 153 aa11.8□□□□□ -0.52
SCN4B-205ENST00000531550 S100A2P29034 98 aa11.8□□□□□ -0.52
SCN4B-205ENST00000531550 PKIAP61925 76 aa11.8□□□□□ -0.52
SCN4B-205ENST00000531550 MRPL52Q86TS9 123 aaKnown RBP11.8□□□□□ -0.52
SCN4B-205ENST00000531550 BAALCQ8WXS3 180 aa11.8□□□□□ -0.52
SCN4B-205ENST00000531550 CHCHD5Q9BSY4 110 aa11.8□□□□□ -0.52
SCN4B-205ENST00000531550 LEPROTL1O95214 131 aa11.79□□□□□ -0.52
SCN4B-205ENST00000531550 NPSP0C0P6 89 aa11.79□□□□□ -0.52
SCN4B-205ENST00000531550 ERASQ7Z444 233 aa11.79□□□□□ -0.52
SCN4B-205ENST00000531550 CIRBP-AS1Q8TBR5 109 aa11.79□□□□□ -0.52
SCN4B-205ENST00000531550 SPANXA1Q9NS26 97 aa11.79□□□□□ -0.52
SCN4B-205ENST00000531550 UBE2D4Q9Y2X8 147 aa11.79□□□□□ -0.52
SCN4B-205ENST00000531550 CSDC2Q9Y534 153 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms