RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 FAM229BQ4G0N7 80 aa1.95□□□□□ -2.1
PTPRK-220ENST00000531466 Q5W150 140 aa1.95□□□□□ -2.1
PTPRK-220ENST00000531466 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.95□□□□□ -2.1
PTPRK-220ENST00000531466 ZCCHC23Q6ZST2 131 aa1.95□□□□□ -2.1
PTPRK-220ENST00000531466 BPESC1Q9GZL8 116 aa1.95□□□□□ -2.1
PTPRK-220ENST00000531466 CDC42SE2Q9NRR3 84 aa1.95□□□□□ -2.1
PTPRK-220ENST00000531466 RREB1Q92766 1687 aa1.95□□□□□ -2.1
PTPRK-220ENST00000531466 ADAMTS7Q9UKP4 1686 aa1.95□□□□□ -2.1
PTPRK-220ENST00000531466 SLIT1O75093 1534 aa1.95□□□□□ -2.1
PTPRK-220ENST00000531466 MED12LQ86YW9 2145 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 CASP8AP2Q9UKL3 1982 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 ARFGEF1Q9Y6D6 1849 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 DOCK9Q9BZ29 2069 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 MYO9BQ13459 2157 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 IGKV1D-42A0A075B6H8 117 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 IGHV3-64A0A075B6Q5 118 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 IGKV1D-37A0A075B6S9 117 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 TRBV30A0A0K0K1B3 111 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 CXorf51AA0A1B0GTR3 108 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 C11orf86A6NJI1 115 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 D6R8Y8 96 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 IGLV7-43P04211 117 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 PRB4P10163 310 aaPredicted RBP1.94□□□□□ -2.1
PTPRK-220ENST00000531466 ZNF22P17026 224 aaPredicted RBP1.94□□□□□ -2.1
PTPRK-220ENST00000531466 SERF2P84101 59 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 MIR22HGQ0VDD5 57 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 FAM74A4Q5TZK3 123 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 SFTA2Q6UW10 78 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 Q6ZR03 302 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 MUSTN1Q8IVN3 82 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 TMEM105Q8N8V8 129 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 ZNF563Q8TA94 476 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 AMELXQ99217 191 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 PSENENQ9NZ42 101 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 S4R3C0 116 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 LRP5O75197 1615 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 LTBP4Q8N2S1 1624 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 NRXN3Q9Y4C0 1643 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 ZFC3H1O60293 1989 aaKnown RBP1.94□□□□□ -2.1
PTPRK-220ENST00000531466 SCN8AQ9UQD0 1980 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 QSER1Q2KHR3 1735 aa1.94□□□□□ -2.1
PTPRK-220ENST00000531466 NUP214P35658 2090 aaPredicted RBP1.94□□□□□ -2.1
PTPRK-220ENST00000531466 PTPRDP23468 1912 aa1.93□□□□□ -2.1
PTPRK-220ENST00000531466 ANAPC1Q9H1A4 1944 aa1.93□□□□□ -2.1
PTPRK-220ENST00000531466 MICAL3Q7RTP6 2002 aa1.93□□□□□ -2.1
PTPRK-220ENST00000531466 LAMB2P55268 1798 aa1.93□□□□□ -2.1
PTPRK-220ENST00000531466 MGAMO43451 1857 aa1.93□□□□□ -2.1
PTPRK-220ENST00000531466 MYO5AQ9Y4I1 1855 aaKnown RBP1.93□□□□□ -2.1
PTPRK-220ENST00000531466 A8MUU9 505 aa1.93□□□□□ -2.1
PTPRK-220ENST00000531466 HMGN4O00479 90 aa1.93□□□□□ -2.1
PTPRK-220ENST00000531466 PPP1R17O96001 155 aa1.93□□□□□ -2.1
PTPRK-220ENST00000531466 IGHV3-33P01772 117 aa1.93□□□□□ -2.1
PTPRK-220ENST00000531466 IFI6P09912 130 aa1.93□□□□□ -2.1
PTPRK-220ENST00000531466 ARMS2P0C7Q2 107 aa1.93□□□□□ -2.1
PTPRK-220ENST00000531466 DEFA4P12838 97 aa1.93□□□□□ -2.1
PTPRK-220ENST00000531466 SPANXA2-OT1Q8N9U9 137 aa1.93□□□□□ -2.1
PTPRK-220ENST00000531466 UBALD1Q8TB05 177 aa1.93□□□□□ -2.1
PTPRK-220ENST00000531466 KLF14Q8TD94 323 aaPredicted RBP1.93□□□□□ -2.1
PTPRK-220ENST00000531466 DMAC1Q96GE9 116 aa1.93□□□□□ -2.1
PTPRK-220ENST00000531466 C20orf166-AS1Q96NR2 134 aa1.93□□□□□ -2.1
PTPRK-220ENST00000531466 NDUFA4L2Q9NRX3 87 aa1.93□□□□□ -2.1
PTPRK-220ENST00000531466 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.93□□□□□ -2.1
PTPRK-220ENST00000531466 LTBP2Q14767 1821 aa1.93□□□□□ -2.1
PTPRK-220ENST00000531466 SLX4Q8IY92 1834 aa1.93□□□□□ -2.1
PTPRK-220ENST00000531466 EXPH5Q8NEV8 1989 aa1.92□□□□□ -2.1
PTPRK-220ENST00000531466 DSCAMO60469 2012 aa1.92□□□□□ -2.1
PTPRK-220ENST00000531466 TRBV7-4A0A0J9YYF1 115 aa1.92□□□□□ -2.1
PTPRK-220ENST00000531466 ODF3BA8MYP8 253 aa1.92□□□□□ -2.1
PTPRK-220ENST00000531466 PSCAO43653 123 aa1.92□□□□□ -2.1
PTPRK-220ENST00000531466 NDUFB1O75438 58 aa1.92□□□□□ -2.1
PTPRK-220ENST00000531466 PLNP26678 52 aa1.92□□□□□ -2.1
PTPRK-220ENST00000531466 SPINT3P49223 89 aa1.92□□□□□ -2.1
PTPRK-220ENST00000531466 DEFB116Q30KQ4 102 aa1.92□□□□□ -2.1
PTPRK-220ENST00000531466 Q86TA4 180 aa1.92□□□□□ -2.1
PTPRK-220ENST00000531466 PROK2Q9HC23 129 aa1.92□□□□□ -2.1
PTPRK-220ENST00000531466 ORMDL1Q9P0S3 153 aa1.92□□□□□ -2.1
PTPRK-220ENST00000531466 COL4A6Q14031 1691 aa1.92□□□□□ -2.1
PTPRK-220ENST00000531466 COL14A1Q05707 1796 aaKnown RBP1.92□□□□□ -2.1
PTPRK-220ENST00000531466 CPAMD8Q8IZJ3 1885 aa1.92□□□□□ -2.1
PTPRK-220ENST00000531466 WDR90Q96KV7 1748 aa1.91□□□□□ -2.1
PTPRK-220ENST00000531466 TSC2P49815 1807 aa1.91□□□□□ -2.1
PTPRK-220ENST00000531466 SNRNP200O75643 2136 aaKnown RBP1.91□□□□□ -2.1
PTPRK-220ENST00000531466 PLXNA3P51805 1871 aa1.91□□□□□ -2.1
PTPRK-220ENST00000531466 TRAV12-1A0A0B4J245 112 aa1.91□□□□□ -2.1
PTPRK-220ENST00000531466 IGHV3-30P01768 117 aa1.91□□□□□ -2.1
PTPRK-220ENST00000531466 IGHV3-30-5P0DP03 117 aa1.91□□□□□ -2.1
PTPRK-220ENST00000531466 HMGA1P17096 107 aaKnown RBP1.91□□□□□ -2.1
PTPRK-220ENST00000531466 FCER1GP30273 86 aa1.91□□□□□ -2.1
PTPRK-220ENST00000531466 ERHP84090 104 aaKnown RBP1.91□□□□□ -2.1
PTPRK-220ENST00000531466 ZNF833PQ6ZTB9 187 aa1.91□□□□□ -2.1
PTPRK-220ENST00000531466 Q9BRP9 147 aa1.91□□□□□ -2.1
PTPRK-220ENST00000531466 SRCAPQ6ZRS2 3230 aa1.91□□□□□ -2.1
PTPRK-220ENST00000531466 CABIN1Q9Y6J0 2220 aa1.91□□□□□ -2.1
PTPRK-220ENST00000531466 LRRC37A3O60309 1634 aa1.91□□□□□ -2.1
PTPRK-220ENST00000531466 SHPRHQ149N8 1683 aa1.9□□□□□ -2.1
PTPRK-220ENST00000531466 IGHV3OR16-8A0A075B7F1 116 aa1.9□□□□□ -2.11
PTPRK-220ENST00000531466 IGKV3D-11A0A0A0MRZ8 115 aa1.9□□□□□ -2.11
PTPRK-220ENST00000531466 A0A0J9YY99 117 aa1.9□□□□□ -2.11
PTPRK-220ENST00000531466 TRBV6-5A0A0K0K1A5 114 aa1.9□□□□□ -2.11
PTPRK-220ENST00000531466 CTXND1A0A1B0GTU2 59 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms