RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 LYPD5Q6UWN5 251 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 NRACQ8N912 160 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 OR5A1Q8NGJ0 315 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 RPL39LQ96EH5 51 aaKnown RBP3.32□□□□□ -1.88
SSBP3-213ENST00000530618 C2orf88Q9BSF0 95 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 ALKBH7Q9BT30 221 aaPredicted RBP3.32□□□□□ -1.88
SSBP3-213ENST00000530618 UPK3BQ9BT76 320 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 APLNQ9ULZ1 77 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 CYSLTR1Q9Y271 337 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 PKHD1L1Q86WI1 4243 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 LOC100131303A0A0U1RQF7 123 aa3.31□□□□□ -1.88
SSBP3-213ENST00000530618 ATP5LO75964 103 aa3.31□□□□□ -1.88
SSBP3-213ENST00000530618 LINC00694P0DN24 101 aa3.31□□□□□ -1.88
SSBP3-213ENST00000530618 S100A2P29034 98 aa3.31□□□□□ -1.88
SSBP3-213ENST00000530618 AKR1D1P51857 326 aa3.31□□□□□ -1.88
SSBP3-213ENST00000530618 POLR2KP53803 58 aaKnown RBP3.31□□□□□ -1.88
SSBP3-213ENST00000530618 Q6ZSN1 163 aa3.31□□□□□ -1.88
SSBP3-213ENST00000530618 NFE4Q86UQ8 179 aa3.31□□□□□ -1.88
SSBP3-213ENST00000530618 YPEL4Q96NS1 127 aa3.31□□□□□ -1.88
SSBP3-213ENST00000530618 SPANXA1Q9NS26 97 aa3.31□□□□□ -1.88
SSBP3-213ENST00000530618 HSPB8Q9UJY1 196 aa3.31□□□□□ -1.88
SSBP3-213ENST00000530618 COX11Q9Y6N1 276 aa3.31□□□□□ -1.88
SSBP3-213ENST00000530618 HMCN2Q8NDA2 5059 aa3.3□□□□□ -1.88
SSBP3-213ENST00000530618 TRAV8-3A0A0A6YYJ7 113 aa3.3□□□□□ -1.88
SSBP3-213ENST00000530618 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.3□□□□□ -1.88
SSBP3-213ENST00000530618 RTL8CO15255 209 aa3.3□□□□□ -1.88
SSBP3-213ENST00000530618 CCL25O15444 150 aa3.3□□□□□ -1.88
SSBP3-213ENST00000530618 HBDP02042 147 aa3.3□□□□□ -1.88
SSBP3-213ENST00000530618 ANGP03950 147 aaKnown RBP3.3□□□□□ -1.88
SSBP3-213ENST00000530618 SEC11AP67812 179 aa3.3□□□□□ -1.88
SSBP3-213ENST00000530618 ESRGQ1W209 222 aa3.3□□□□□ -1.88
SSBP3-213ENST00000530618 LINC01556Q5JQF7 62 aa3.3□□□□□ -1.88
SSBP3-213ENST00000530618 C18orf32Q8TCD1 76 aa3.3□□□□□ -1.88
SSBP3-213ENST00000530618 TMEM141Q96I45 108 aa3.3□□□□□ -1.88
SSBP3-213ENST00000530618 TIMM21Q9BVV7 248 aa3.3□□□□□ -1.88
SSBP3-213ENST00000530618 TM2D2Q9BX73 214 aa3.3□□□□□ -1.88
SSBP3-213ENST00000530618 Q9H8V8 135 aa3.3□□□□□ -1.88
SSBP3-213ENST00000530618 CSDC2Q9Y534 153 aaKnown RBP3.3□□□□□ -1.88
SSBP3-213ENST00000530618 TRAV8-4A0A0B4J246 113 aa3.29□□□□□ -1.88
SSBP3-213ENST00000530618 A0A1B0GUV1 79 aa3.29□□□□□ -1.88
SSBP3-213ENST00000530618 C20orf202A1L168 122 aa3.29□□□□□ -1.88
SSBP3-213ENST00000530618 EREGO14944 169 aa3.29□□□□□ -1.88
SSBP3-213ENST00000530618 PSCAO43653 123 aa3.29□□□□□ -1.88
SSBP3-213ENST00000530618 TSHBP01222 138 aa3.29□□□□□ -1.88
SSBP3-213ENST00000530618 DNAH10OSP0CZ25 163 aa3.29□□□□□ -1.88
SSBP3-213ENST00000530618 FGF6P10767 208 aa3.29□□□□□ -1.88
SSBP3-213ENST00000530618 GAGE6Q13070 117 aa3.29□□□□□ -1.88
SSBP3-213ENST00000530618 SS18Q15532 418 aa3.29□□□□□ -1.88
SSBP3-213ENST00000530618 C2orf66Q6UXQ4 117 aa3.29□□□□□ -1.88
SSBP3-213ENST00000530618 TEX43Q6ZNM6 134 aa3.29□□□□□ -1.88
SSBP3-213ENST00000530618 MRPL52Q86TS9 123 aaKnown RBP3.29□□□□□ -1.88
SSBP3-213ENST00000530618 NIT1Q86X76 327 aa3.29□□□□□ -1.88
SSBP3-213ENST00000530618 C20orf203Q8NBC4 194 aa3.29□□□□□ -1.88
SSBP3-213ENST00000530618 PACRGQ96M98 296 aaPredicted RBP3.29□□□□□ -1.88
SSBP3-213ENST00000530618 SCGB3A1Q96QR1 104 aa3.29□□□□□ -1.88
SSBP3-213ENST00000530618 TIMM17AQ99595 171 aa3.29□□□□□ -1.88
SSBP3-213ENST00000530618 VCX2Q9H322 139 aa3.29□□□□□ -1.88
SSBP3-213ENST00000530618 PYGO1Q9Y3Y4 419 aa3.29□□□□□ -1.88
SSBP3-213ENST00000530618 LINC00588Q9Y4M8 146 aa3.29□□□□□ -1.88
SSBP3-213ENST00000530618 LRP1Q07954 4544 aaKnown RBP3.28□□□□□ -1.88
SSBP3-213ENST00000530618 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.28□□□□□ -1.88
SSBP3-213ENST00000530618 IGKV2-29A2NJV5 120 aaPredicted RBP3.28□□□□□ -1.88
SSBP3-213ENST00000530618 LINC01546A6NGU7 62 aa3.28□□□□□ -1.88
SSBP3-213ENST00000530618 LEPROTL1O95214 131 aa3.28□□□□□ -1.88
SSBP3-213ENST00000530618 IGHV3-30P01768 117 aa3.28□□□□□ -1.88
SSBP3-213ENST00000530618 IGHV3-33P01772 117 aa3.28□□□□□ -1.88
SSBP3-213ENST00000530618 IGHV3-30-3P0DP02 117 aa3.28□□□□□ -1.88
SSBP3-213ENST00000530618 IGHV3-30-5P0DP03 117 aa3.28□□□□□ -1.88
SSBP3-213ENST00000530618 ESDP10768 282 aa3.28□□□□□ -1.88
SSBP3-213ENST00000530618 NDUFA6P56556 154 aa3.28□□□□□ -1.88
SSBP3-213ENST00000530618 S100A12P80511 92 aa3.28□□□□□ -1.88
SSBP3-213ENST00000530618 MRPS36P82909 103 aaKnown RBP3.28□□□□□ -1.88
SSBP3-213ENST00000530618 MIAQ16674 131 aa3.28□□□□□ -1.88
SSBP3-213ENST00000530618 LCE4AQ5TA78 99 aa3.28□□□□□ -1.88
SSBP3-213ENST00000530618 LCE5AQ5TCM9 118 aa3.28□□□□□ -1.88
SSBP3-213ENST00000530618 ERASQ7Z444 233 aa3.28□□□□□ -1.88
SSBP3-213ENST00000530618 TOMM6Q96B49 74 aa3.28□□□□□ -1.88
SSBP3-213ENST00000530618 C1orf43Q9BWL3 253 aa3.28□□□□□ -1.88
SSBP3-213ENST00000530618 MAP1LC3CQ9BXW4 147 aa3.28□□□□□ -1.88
SSBP3-213ENST00000530618 IGLV2-18A0A075B6J9 118 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 NBDYA0A0U1RRE5 68 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 IFITM10A6NMD0 228 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 HIST1H2BKO60814 126 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 SERF1AO75920 110 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 HIST1H2BJP06899 126 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 PRSS1P07477 247 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 HIST1H2BOP23527 126 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 HIST1H2BBP33778 126 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 HIST1H2BDP58876 126 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 HIST1H2BCP62807 126 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 RBX1P62877 108 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 CTAG1AP78358 180 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 HIST2H2BEQ16778 126 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 C14orf177Q52M58 125 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 MPV17L2Q567V2 206 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.27□□□□□ -1.89
SSBP3-213ENST00000530618 CFAP161Q6P656 301 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 Q6ZR54 194 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 WFDC10BQ8IUB3 73 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 ZNF664Q8N3J9 261 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms