RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 AP1S3Q96PC3 154 aa1.96□□□□□ -2.1
CASP4-208ENST00000530309 AMELXQ99217 191 aa1.96□□□□□ -2.1
CASP4-208ENST00000530309 XAGE1AQ9HD64 81 aa1.96□□□□□ -2.1
CASP4-208ENST00000530309 TMEM14BQ9NUH8 114 aa1.96□□□□□ -2.1
CASP4-208ENST00000530309 EPDR1Q9UM22 224 aa1.96□□□□□ -2.1
CASP4-208ENST00000530309 USF3Q68DE3 2245 aa1.96□□□□□ -2.1
CASP4-208ENST00000530309 CEP350Q5VT06 3117 aa1.96□□□□□ -2.1
CASP4-208ENST00000530309 SNRNP200O75643 2136 aaKnown RBP1.96□□□□□ -2.1
CASP4-208ENST00000530309 TRAV7A0A075B6U4 112 aa1.95□□□□□ -2.1
CASP4-208ENST00000530309 TRAV12-1A0A0B4J245 112 aa1.95□□□□□ -2.1
CASP4-208ENST00000530309 IGKV2-29A2NJV5 120 aaPredicted RBP1.95□□□□□ -2.1
CASP4-208ENST00000530309 C9JAW5 83 aa1.95□□□□□ -2.1
CASP4-208ENST00000530309 TCL1BO95988 128 aa1.95□□□□□ -2.1
CASP4-208ENST00000530309 HBDP02042 147 aa1.95□□□□□ -2.1
CASP4-208ENST00000530309 APOA2P02652 100 aa1.95□□□□□ -2.1
CASP4-208ENST00000530309 LGALS1P09382 135 aaKnown RBP1.95□□□□□ -2.1
CASP4-208ENST00000530309 LINC00694P0DN24 101 aa1.95□□□□□ -2.1
CASP4-208ENST00000530309 RPL7P18124 248 aaKnown RBP1.95□□□□□ -2.1
CASP4-208ENST00000530309 FCER1GP30273 86 aa1.95□□□□□ -2.1
CASP4-208ENST00000530309 IFI27P40305 119 aaPredicted RBP1.95□□□□□ -2.1
CASP4-208ENST00000530309 RPL28P46779 137 aaKnown RBP1.95□□□□□ -2.1
CASP4-208ENST00000530309 CRIP1P50238 77 aa1.95□□□□□ -2.1
CASP4-208ENST00000530309 TCTAP57738 103 aa1.95□□□□□ -2.1
CASP4-208ENST00000530309 IFI27L1Q96BM0 104 aa1.95□□□□□ -2.1
CASP4-208ENST00000530309 NABP2Q9BQ15 211 aa1.95□□□□□ -2.1
CASP4-208ENST00000530309 AGPAT4-IT1Q9H0P7 198 aa1.95□□□□□ -2.1
CASP4-208ENST00000530309 PROK2Q9HC23 129 aa1.95□□□□□ -2.1
CASP4-208ENST00000530309 NHP2Q9NX24 153 aaKnown RBP1.95□□□□□ -2.1
CASP4-208ENST00000530309 HIGD1AQ9Y241 93 aa1.95□□□□□ -2.1
CASP4-208ENST00000530309 TRAV3A0A0B4J244 114 aa1.94□□□□□ -2.1
CASP4-208ENST00000530309 TRAV5A0A0B4J249 113 aa1.94□□□□□ -2.1
CASP4-208ENST00000530309 IGHV1-18A0A0C4DH31 117 aa1.94□□□□□ -2.1
CASP4-208ENST00000530309 LOC107984640A0A0U1RRK4 108 aa1.94□□□□□ -2.1
CASP4-208ENST00000530309 A0A1B0GUT8 65 aa1.94□□□□□ -2.1
CASP4-208ENST00000530309 H3BT86 120 aa1.94□□□□□ -2.1
CASP4-208ENST00000530309 H7C2G1 150 aa1.94□□□□□ -2.1
CASP4-208ENST00000530309 J3KT08 172 aa1.94□□□□□ -2.1
CASP4-208ENST00000530309 LST1O00453 97 aa1.94□□□□□ -2.1
CASP4-208ENST00000530309 UQCRQO14949 82 aa1.94□□□□□ -2.1
CASP4-208ENST00000530309 NPFFO15130 113 aa1.94□□□□□ -2.1
CASP4-208ENST00000530309 OR2H2O95918 312 aa1.94□□□□□ -2.1
CASP4-208ENST00000530309 ARMS2P0C7Q2 107 aa1.94□□□□□ -2.1
CASP4-208ENST00000530309 IGLC6P0CF74 106 aa1.94□□□□□ -2.1
CASP4-208ENST00000530309 EFNA4P52798 201 aa1.94□□□□□ -2.1
CASP4-208ENST00000530309 HSPE1P61604 102 aaKnown RBP1.94□□□□□ -2.1
CASP4-208ENST00000530309 TMEM155Q4W5P6 130 aa1.94□□□□□ -2.1
CASP4-208ENST00000530309 NDUFA11Q86Y39 141 aa1.94□□□□□ -2.1
CASP4-208ENST00000530309 ANKRD29Q8N6D5 301 aa1.94□□□□□ -2.1
CASP4-208ENST00000530309 Q8N8P6 123 aa1.94□□□□□ -2.1
CASP4-208ENST00000530309 CCL4L1Q8NHW4 92 aa1.94□□□□□ -2.1
CASP4-208ENST00000530309 OR2H1Q9GZK4 316 aa1.94□□□□□ -2.1
CASP4-208ENST00000530309 PRNDQ9UKY0 176 aa1.94□□□□□ -2.1
CASP4-208ENST00000530309 C22orf24Q9Y442 160 aa1.94□□□□□ -2.1
CASP4-208ENST00000530309 UNC13CQ8NB66 2214 aa1.94□□□□□ -2.1
CASP4-208ENST00000530309 KIAA1549LQ6ZVL6 1849 aa1.94□□□□□ -2.1
CASP4-208ENST00000530309 CUL9Q8IWT3 2517 aa1.93□□□□□ -2.1
CASP4-208ENST00000530309 MED12LQ86YW9 2145 aa1.93□□□□□ -2.1
CASP4-208ENST00000530309 GOLGA4Q13439 2230 aaKnown RBP1.93□□□□□ -2.1
CASP4-208ENST00000530309 TNRC6AQ8NDV7 1962 aaKnown RBP1.93□□□□□ -2.1
CASP4-208ENST00000530309 A8MWV9 139 aa1.93□□□□□ -2.1
CASP4-208ENST00000530309 DPM2O94777 84 aa1.93□□□□□ -2.1
CASP4-208ENST00000530309 IGHV3-30P01768 117 aa1.93□□□□□ -2.1
CASP4-208ENST00000530309 IGHV3-33P01772 117 aa1.93□□□□□ -2.1
CASP4-208ENST00000530309 TCRAP04437 139 aa1.93□□□□□ -2.1
CASP4-208ENST00000530309 IGHV3-30-5P0DP03 117 aa1.93□□□□□ -2.1
CASP4-208ENST00000530309 MGST1P10620 155 aaKnown RBP1.93□□□□□ -2.1
CASP4-208ENST00000530309 CCL5P13501 91 aa1.93□□□□□ -2.1
CASP4-208ENST00000530309 PRCDQ00LT1 54 aa1.93□□□□□ -2.1
CASP4-208ENST00000530309 Q86TA4 180 aa1.93□□□□□ -2.1
CASP4-208ENST00000530309 C15orf53Q8NAA6 179 aa1.93□□□□□ -2.1
CASP4-208ENST00000530309 DPH3Q96FX2 82 aa1.93□□□□□ -2.1
CASP4-208ENST00000530309 PRADC1Q9BSG0 188 aa1.93□□□□□ -2.1
CASP4-208ENST00000530309 TMEM14CQ9P0S9 112 aa1.93□□□□□ -2.1
CASP4-208ENST00000530309 CHCHD2Q9Y6H1 151 aaPredicted RBP1.93□□□□□ -2.1
CASP4-208ENST00000530309 EP400Q96L91 3159 aa1.93□□□□□ -2.1
CASP4-208ENST00000530309 MYO7BQ6PIF6 2116 aa1.93□□□□□ -2.1
CASP4-208ENST00000530309 MYOFQ9NZM1 2061 aa1.92□□□□□ -2.1
CASP4-208ENST00000530309 TRAV17A0A0B4J275 112 aa1.92□□□□□ -2.1
CASP4-208ENST00000530309 A0A0J9YY99 117 aa1.92□□□□□ -2.1
CASP4-208ENST00000530309 TRBV10-2A0A0K0K1G8 114 aa1.92□□□□□ -2.1
CASP4-208ENST00000530309 TMEM30CPA0ZSE6 113 aa1.92□□□□□ -2.1
CASP4-208ENST00000530309 LINC01549A6NIU2 74 aa1.92□□□□□ -2.1
CASP4-208ENST00000530309 OOSP1A8MZH6 123 aa1.92□□□□□ -2.1
CASP4-208ENST00000530309 K7EMI3 77 aa1.92□□□□□ -2.1
CASP4-208ENST00000530309 IGKCP01834 107 aa1.92□□□□□ -2.1
CASP4-208ENST00000530309 COX7CP15954 63 aa1.92□□□□□ -2.1
CASP4-208ENST00000530309 GLRXP35754 106 aa1.92□□□□□ -2.1
CASP4-208ENST00000530309 PCBD1P61457 104 aa1.92□□□□□ -2.1
CASP4-208ENST00000530309 EDDM3AQ14507 147 aa1.92□□□□□ -2.1
CASP4-208ENST00000530309 ESPL1Q14674 2120 aa1.92□□□□□ -2.1
CASP4-208ENST00000530309 Q6ZSA8 131 aa1.92□□□□□ -2.1
CASP4-208ENST00000530309 Q8IYB0 196 aa1.92□□□□□ -2.1
CASP4-208ENST00000530309 DYNAPQ8N1N2 210 aa1.92□□□□□ -2.1
CASP4-208ENST00000530309 TMEM86BQ8N661 226 aa1.92□□□□□ -2.1
CASP4-208ENST00000530309 TMEM263Q8WUH6 116 aaKnown RBP1.92□□□□□ -2.1
CASP4-208ENST00000530309 PATE1Q8WXA2 126 aa1.92□□□□□ -2.1
CASP4-208ENST00000530309 CYSTM1Q9H1C7 97 aa1.92□□□□□ -2.1
CASP4-208ENST00000530309 NDUFA4L2Q9NRX3 87 aa1.92□□□□□ -2.1
CASP4-208ENST00000530309 MRPL35Q9NZE8 188 aaKnown RBP1.92□□□□□ -2.1
CASP4-208ENST00000530309 MRPL36Q9P0J6 103 aaKnown RBP1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms