RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 MRAP2Q96G30 205 aa3.36□□□□□ -1.87
CTSB-216ENST00000530290 TPPP3Q9BW30 176 aa3.36□□□□□ -1.87
CTSB-216ENST00000530290 CNFNQ9BYD5 112 aa3.36□□□□□ -1.87
CTSB-216ENST00000530290 MRPL35Q9NZE8 188 aaKnown RBP3.36□□□□□ -1.87
CTSB-216ENST00000530290 A0A087WZ39 114 aa3.35□□□□□ -1.87
CTSB-216ENST00000530290 MUC21A0A140T8X8 626 aa3.35□□□□□ -1.87
CTSB-216ENST00000530290 G3V3Q6 166 aa3.35□□□□□ -1.87
CTSB-216ENST00000530290 TLX1NBP0CAT3 122 aa3.35□□□□□ -1.87
CTSB-216ENST00000530290 BCL2P10415 239 aa3.35□□□□□ -1.87
CTSB-216ENST00000530290 CTRLP40313 264 aa3.35□□□□□ -1.87
CTSB-216ENST00000530290 PHF5AQ7RTV0 110 aaKnown RBP3.35□□□□□ -1.87
CTSB-216ENST00000530290 OR10D4PQ8NGN7 298 aa3.35□□□□□ -1.87
CTSB-216ENST00000530290 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.34□□□□□ -1.87
CTSB-216ENST00000530290 TRBV6-5A0A0K0K1A5 114 aa3.34□□□□□ -1.87
CTSB-216ENST00000530290 SCO2A0A1W2PP80 73 aa3.34□□□□□ -1.87
CTSB-216ENST00000530290 IGKV2-29A2NJV5 120 aaPredicted RBP3.34□□□□□ -1.87
CTSB-216ENST00000530290 SDHAF1A6NFY7 115 aa3.34□□□□□ -1.87
CTSB-216ENST00000530290 UMAD1C9J7I0 102 aa3.34□□□□□ -1.87
CTSB-216ENST00000530290 I3L3M4 83 aa3.34□□□□□ -1.87
CTSB-216ENST00000530290 BCL2L11O43521 198 aa3.34□□□□□ -1.87
CTSB-216ENST00000530290 NUPR1O60356 82 aa3.34□□□□□ -1.87
CTSB-216ENST00000530290 PAGE4O60829 102 aa3.34□□□□□ -1.87
CTSB-216ENST00000530290 IFNA1P01562 189 aa3.34□□□□□ -1.87
CTSB-216ENST00000530290 RPL35P42766 123 aaKnown RBP3.34□□□□□ -1.87
CTSB-216ENST00000530290 RPL7L1Q6DKI1 246 aaKnown RBP3.34□□□□□ -1.87
CTSB-216ENST00000530290 C11orf52Q96A22 123 aa3.34□□□□□ -1.87
CTSB-216ENST00000530290 CDIP1Q9H305 208 aa3.34□□□□□ -1.87
CTSB-216ENST00000530290 CDC42SE2Q9NRR3 84 aa3.34□□□□□ -1.87
CTSB-216ENST00000530290 CSDC2Q9Y534 153 aaKnown RBP3.34□□□□□ -1.87
CTSB-216ENST00000530290 C7orf77A4D0Y5 90 aa3.33□□□□□ -1.88
CTSB-216ENST00000530290 NDUFA1O15239 70 aa3.33□□□□□ -1.88
CTSB-216ENST00000530290 ZNF861PO60384 105 aa3.33□□□□□ -1.88
CTSB-216ENST00000530290 GIPP09681 153 aaPredicted RBP3.33□□□□□ -1.88
CTSB-216ENST00000530290 LINC01547P58512 204 aaPredicted RBP3.33□□□□□ -1.88
CTSB-216ENST00000530290 SSTP61278 116 aa3.33□□□□□ -1.88
CTSB-216ENST00000530290 UBE2BP63146 152 aa3.33□□□□□ -1.88
CTSB-216ENST00000530290 SPAG11BQ08648 103 aa3.33□□□□□ -1.88
CTSB-216ENST00000530290 TMEM241Q24JQ0 296 aa3.33□□□□□ -1.88
CTSB-216ENST00000530290 TMUB2Q71RG4 321 aa3.33□□□□□ -1.88
CTSB-216ENST00000530290 C9orf62Q8N4C0 152 aa3.33□□□□□ -1.88
CTSB-216ENST00000530290 GATD1Q8NB37 220 aa3.33□□□□□ -1.88
CTSB-216ENST00000530290 LINC00526Q96FQ7 95 aa3.33□□□□□ -1.88
CTSB-216ENST00000530290 RPP21Q9H633 154 aaKnown RBP3.33□□□□□ -1.88
CTSB-216ENST00000530290 MANBALQ9NQG1 85 aa3.33□□□□□ -1.88
CTSB-216ENST00000530290 M0QXV9 152 aa3.32□□□□□ -1.88
CTSB-216ENST00000530290 CRYGAP11844 174 aa3.32□□□□□ -1.88
CTSB-216ENST00000530290 PMCHP20382 165 aa3.32□□□□□ -1.88
CTSB-216ENST00000530290 CCL20P78556 96 aa3.32□□□□□ -1.88
CTSB-216ENST00000530290 TWIST1Q15672 202 aa3.32□□□□□ -1.88
CTSB-216ENST00000530290 CENPWQ5EE01 88 aa3.32□□□□□ -1.88
CTSB-216ENST00000530290 LYZL1Q6UWQ5 148 aa3.32□□□□□ -1.88
CTSB-216ENST00000530290 MBD3L1Q8WWY6 194 aa3.32□□□□□ -1.88
CTSB-216ENST00000530290 TRBV30A0A0K0K1B3 111 aa3.31□□□□□ -1.88
CTSB-216ENST00000530290 TRBV27A0A0K0K1C4 114 aa3.31□□□□□ -1.88
CTSB-216ENST00000530290 RAB19A4D1S5 217 aa3.31□□□□□ -1.88
CTSB-216ENST00000530290 TEX46H3BTG2 121 aa3.31□□□□□ -1.88
CTSB-216ENST00000530290 PPP1R17O96001 155 aa3.31□□□□□ -1.88
CTSB-216ENST00000530290 GNG4P50150 75 aa3.31□□□□□ -1.88
CTSB-216ENST00000530290 KCNRGQ8N5I3 272 aa3.31□□□□□ -1.88
CTSB-216ENST00000530290 TYMSOSQ8TAI1 123 aa3.31□□□□□ -1.88
CTSB-216ENST00000530290 SFT2D1Q8WV19 159 aa3.31□□□□□ -1.88
CTSB-216ENST00000530290 TMEM18Q96B42 140 aa3.31□□□□□ -1.88
CTSB-216ENST00000530290 RPL39LQ96EH5 51 aaKnown RBP3.31□□□□□ -1.88
CTSB-216ENST00000530290 SMDT1Q9H4I9 107 aa3.31□□□□□ -1.88
CTSB-216ENST00000530290 ST20Q9HBF5 79 aa3.31□□□□□ -1.88
CTSB-216ENST00000530290 CYTL1Q9NRR1 136 aa3.31□□□□□ -1.88
CTSB-216ENST00000530290 ALG5Q9Y673 324 aa3.31□□□□□ -1.88
CTSB-216ENST00000530290 FXYD6-FXYD2A0A087WZ82 144 aa3.3□□□□□ -1.88
CTSB-216ENST00000530290 TCAPO15273 167 aa3.3□□□□□ -1.88
CTSB-216ENST00000530290 PDE6DO43924 150 aa3.3□□□□□ -1.88
CTSB-216ENST00000530290 TSPAN13O95857 204 aa3.3□□□□□ -1.88
CTSB-216ENST00000530290 TSHBP01222 138 aa3.3□□□□□ -1.88
CTSB-216ENST00000530290 RPL28P46779 137 aaKnown RBP3.3□□□□□ -1.88
CTSB-216ENST00000530290 FAM19A5Q7Z5A7 132 aaPredicted RBP3.3□□□□□ -1.88
CTSB-216ENST00000530290 TIMM21Q9BVV7 248 aa3.3□□□□□ -1.88
CTSB-216ENST00000530290 NDUFC2-KCTD14E9PQ53 114 aa3.29□□□□□ -1.88
CTSB-216ENST00000530290 H2AFB1P0C5Y9 115 aa3.29□□□□□ -1.88
CTSB-216ENST00000530290 TAGLN2P37802 199 aaKnown RBP3.29□□□□□ -1.88
CTSB-216ENST00000530290 ZNF345Q14585 488 aa3.29□□□□□ -1.88
CTSB-216ENST00000530290 FAM229BQ4G0N7 80 aa3.29□□□□□ -1.88
CTSB-216ENST00000530290 LBHQ53QV2 105 aaPredicted RBP3.29□□□□□ -1.88
CTSB-216ENST00000530290 FAM213BQ8TBF2 198 aa3.29□□□□□ -1.88
CTSB-216ENST00000530290 ORAOV1Q8WV07 137 aa3.29□□□□□ -1.88
CTSB-216ENST00000530290 BORCS7Q96B45 105 aa3.29□□□□□ -1.88
CTSB-216ENST00000530290 KIR2DL4Q99706 377 aa3.29□□□□□ -1.88
CTSB-216ENST00000530290 OPRPNQ99935 248 aaPredicted RBP3.29□□□□□ -1.88
CTSB-216ENST00000530290 TMEM242Q9NWH2 141 aa3.29□□□□□ -1.88
CTSB-216ENST00000530290 IGLV7-46A0A075B6I9 117 aa3.28□□□□□ -1.88
CTSB-216ENST00000530290 TRAV13-1A0A0B4J241 112 aa3.28□□□□□ -1.88
CTSB-216ENST00000530290 VCYO14598 125 aa3.28□□□□□ -1.88
CTSB-216ENST00000530290 PPP1R2P9O14990 202 aa3.28□□□□□ -1.88
CTSB-216ENST00000530290 FCER1GP30273 86 aa3.28□□□□□ -1.88
CTSB-216ENST00000530290 POLR2KP53803 58 aaKnown RBP3.28□□□□□ -1.88
CTSB-216ENST00000530290 CT83Q5H943 113 aa3.28□□□□□ -1.88
CTSB-216ENST00000530290 LINC00173Q6ZV60 143 aa3.28□□□□□ -1.88
CTSB-216ENST00000530290 FP248Q71RG6 208 aaPredicted RBP3.28□□□□□ -1.88
CTSB-216ENST00000530290 C5orf38Q86SI9 138 aa3.28□□□□□ -1.88
CTSB-216ENST00000530290 LINC00304Q8N9R0 145 aa3.28□□□□□ -1.88
CTSB-216ENST00000530290 PACRGQ96M98 296 aaPredicted RBP3.28□□□□□ -1.88
CTSB-216ENST00000530290 TP73-AS1Q9UF72 201 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms