RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 BBC3Q96PG8 261 aaPredicted RBP9.13□□□□□ -0.95
SCN3B-206ENST00000530277 CUBNO60494 3623 aa9.13□□□□□ -0.95
SCN3B-206ENST00000530277 IGLV4-3A0A075B6K6 122 aa9.13□□□□□ -0.95
SCN3B-206ENST00000530277 DEFB135Q30KP9 77 aa9.13□□□□□ -0.95
SCN3B-206ENST00000530277 S100A7L2Q5SY68 101 aa9.13□□□□□ -0.95
SCN3B-206ENST00000530277 IGLV1-40P01703 118 aa9.13□□□□□ -0.95
SCN3B-206ENST00000530277 ZNF22P17026 224 aaPredicted RBP9.13□□□□□ -0.95
SCN3B-206ENST00000530277 Q6YL49 198 aa9.13□□□□□ -0.95
SCN3B-206ENST00000530277 ANKRD29Q8N6D5 301 aa9.13□□□□□ -0.95
SCN3B-206ENST00000530277 CNFNQ9BYD5 112 aa9.13□□□□□ -0.95
SCN3B-206ENST00000530277 Q9UF83 564 aa9.13□□□□□ -0.95
SCN3B-206ENST00000530277 ZNF702PQ9H963 129 aa9.12□□□□□ -0.95
SCN3B-206ENST00000530277 KLLNB2CW77 178 aa9.12□□□□□ -0.95
SCN3B-206ENST00000530277 J3QKU1 62 aa9.12□□□□□ -0.95
SCN3B-206ENST00000530277 FOXI1Q12951 378 aa9.12□□□□□ -0.95
SCN3B-206ENST00000530277 DEFB114Q30KQ6 69 aa9.12□□□□□ -0.95
SCN3B-206ENST00000530277 TMEM86BQ8N661 226 aa9.12□□□□□ -0.95
SCN3B-206ENST00000530277 UBE2WQ96B02 151 aa9.12□□□□□ -0.95
SCN3B-206ENST00000530277 TRBV7-3A0A075B6L6 115 aa9.12□□□□□ -0.95
SCN3B-206ENST00000530277 GYPEP15421 78 aa9.12□□□□□ -0.95
SCN3B-206ENST00000530277 LOC100131303A0A0U1RQF7 123 aa9.11□□□□□ -0.95
SCN3B-206ENST00000530277 TINCRA0A1B0GVN0 87 aa9.11□□□□□ -0.95
SCN3B-206ENST00000530277 PLA2G2AP14555 144 aa9.11□□□□□ -0.95
SCN3B-206ENST00000530277 CRIP2P52943 208 aaPredicted RBP9.11□□□□□ -0.95
SCN3B-206ENST00000530277 TM2D2Q9BX73 214 aa9.11□□□□□ -0.95
SCN3B-206ENST00000530277 DAD1P61803 113 aa9.11□□□□□ -0.95
SCN3B-206ENST00000530277 LINC00482Q8N8I6 264 aa9.11□□□□□ -0.95
SCN3B-206ENST00000530277 CSMD1Q96PZ7 3565 aa9.11□□□□□ -0.95
SCN3B-206ENST00000530277 NBEAL1Q6ZS30 2694 aa9.11□□□□□ -0.95
SCN3B-206ENST00000530277 ZNF843Q8N446 348 aa9.11□□□□□ -0.95
SCN3B-206ENST00000530277 RBMY1BA6NDE4 496 aaKnown RBP9.1□□□□□ -0.95
SCN3B-206ENST00000530277 RBMY1EA6NEQ0 496 aaKnown RBP9.1□□□□□ -0.95
SCN3B-206ENST00000530277 RBMY1DP0C7P1 496 aaKnown RBP9.1□□□□□ -0.95
SCN3B-206ENST00000530277 RBMY1A1P0DJD3 496 aaKnown RBP9.1□□□□□ -0.95
SCN3B-206ENST00000530277 RBMY1CP0DJD4 496 aa9.1□□□□□ -0.95
SCN3B-206ENST00000530277 POLR2KP53803 58 aaKnown RBP9.1□□□□□ -0.95
SCN3B-206ENST00000530277 UFSP1Q6NVU6 142 aa9.1□□□□□ -0.95
SCN3B-206ENST00000530277 NFE4Q86UQ8 179 aa9.1□□□□□ -0.95
SCN3B-206ENST00000530277 A0A0J9YXY3 114 aa9.1□□□□□ -0.95
SCN3B-206ENST00000530277 TSPEAR-AS2P59090 65 aa9.09□□□□□ -0.95
SCN3B-206ENST00000530277 HERVK_113P63121 156 aa9.09□□□□□ -0.95
SCN3B-206ENST00000530277 K7EQD1 137 aa9.09□□□□□ -0.95
SCN3B-206ENST00000530277 TSHBP01222 138 aa9.09□□□□□ -0.95
SCN3B-206ENST00000530277 DEFB121Q5J5C9 76 aa9.09□□□□□ -0.95
SCN3B-206ENST00000530277 NF1P21359 2839 aa9.09□□□□□ -0.95
SCN3B-206ENST00000530277 MED14OSP0DP75 135 aa9.09□□□□□ -0.95
SCN3B-206ENST00000530277 HIST1H4AP62805 103 aaKnown RBP9.09□□□□□ -0.95
SCN3B-206ENST00000530277 SS18Q15532 418 aa9.09□□□□□ -0.95
SCN3B-206ENST00000530277 VSIG2Q96IQ7 327 aa9.09□□□□□ -0.95
SCN3B-206ENST00000530277 XGP55808 180 aa9.08□□□□□ -0.96
SCN3B-206ENST00000530277 PIK3CD-AS1Q5SR53 167 aa9.08□□□□□ -0.96
SCN3B-206ENST00000530277 CFAP126Q5VTH2 177 aa9.08□□□□□ -0.96
SCN3B-206ENST00000530277 C15orf53Q8NAA6 179 aa9.08□□□□□ -0.96
SCN3B-206ENST00000530277 SPANXA1Q9NS26 97 aa9.08□□□□□ -0.96
SCN3B-206ENST00000530277 IGLV2-18A0A075B6J9 118 aa9.08□□□□□ -0.96
SCN3B-206ENST00000530277 Q9HAA7 133 aa9.08□□□□□ -0.96
SCN3B-206ENST00000530277 TRBV27A0A0K0K1C4 114 aa9.07□□□□□ -0.96
SCN3B-206ENST00000530277 LINC01620Q4KN68 170 aa9.07□□□□□ -0.96
SCN3B-206ENST00000530277 IGHV1-58A0A0C4DH39 117 aa9.07□□□□□ -0.96
SCN3B-206ENST00000530277 SLC25A29Q8N8R3 303 aa9.07□□□□□ -0.96
SCN3B-206ENST00000530277 C4orf3Q8WVX3 66 aa9.07□□□□□ -0.96
SCN3B-206ENST00000530277 DPH3Q96FX2 82 aa9.07□□□□□ -0.96
SCN3B-206ENST00000530277 IGHV4-4A0A075B6R2 117 aa9.06□□□□□ -0.96
SCN3B-206ENST00000530277 TEX49A0A1B0GTD5 131 aa9.06□□□□□ -0.96
SCN3B-206ENST00000530277 LGALS9O00182 355 aa9.06□□□□□ -0.96
SCN3B-206ENST00000530277 TEN1Q86WV5 123 aa9.06□□□□□ -0.96
SCN3B-206ENST00000530277 ICOSQ9Y6W8 199 aa9.06□□□□□ -0.96
SCN3B-206ENST00000530277 NOTCH1P46531 2555 aa9.06□□□□□ -0.96
SCN3B-206ENST00000530277 SOCS3O14543 225 aa9.06□□□□□ -0.96
SCN3B-206ENST00000530277 IFITM1P13164 125 aa9.06□□□□□ -0.96
SCN3B-206ENST00000530277 EDA2RQ9HAV5 297 aa9.06□□□□□ -0.96
SCN3B-206ENST00000530277 SVEP1Q4LDE5 3571 aa9.06□□□□□ -0.96
SCN3B-206ENST00000530277 Q6ZSN1 163 aa9.05□□□□□ -0.96
SCN3B-206ENST00000530277 MIR7-3HGQ8N6C7 128 aa9.05□□□□□ -0.96
SCN3B-206ENST00000530277 LAMTOR3Q9UHA4 124 aa9.05□□□□□ -0.96
SCN3B-206ENST00000530277 IGIPA6NJ69 53 aa9.05□□□□□ -0.96
SCN3B-206ENST00000530277 ATP5G1P05496 136 aa9.05□□□□□ -0.96
SCN3B-206ENST00000530277 LINC00526Q96FQ7 95 aa9.05□□□□□ -0.96
SCN3B-206ENST00000530277 TRAV4A0A0B4J268 109 aa9.05□□□□□ -0.96
SCN3B-206ENST00000530277 MRAPQ8TCY5 172 aa9.05□□□□□ -0.96
SCN3B-206ENST00000530277 PSMG3-AS1Q96PY0 264 aa9.05□□□□□ -0.96
SCN3B-206ENST00000530277 SND1-IT1Q9HBX3 110 aa9.05□□□□□ -0.96
SCN3B-206ENST00000530277 FBN2P35556 2912 aa9.04□□□□□ -0.96
SCN3B-206ENST00000530277 TMEM223A0PJW6 202 aa9.04□□□□□ -0.96
SCN3B-206ENST00000530277 ATP6V0E2Q8NHE4 81 aa9.04□□□□□ -0.96
SCN3B-206ENST00000530277 IGHV3-30P01768 117 aa9.03□□□□□ -0.96
SCN3B-206ENST00000530277 IGHV3-33P01772 117 aa9.03□□□□□ -0.96
SCN3B-206ENST00000530277 IGHV3-30-5P0DP03 117 aa9.03□□□□□ -0.96
SCN3B-206ENST00000530277 ODF3L2Q3SX64 289 aa9.03□□□□□ -0.96
SCN3B-206ENST00000530277 C9orf85Q96MD7 179 aa9.03□□□□□ -0.96
SCN3B-206ENST00000530277 BAALC-AS2P0C853 105 aa9.03□□□□□ -0.96
SCN3B-206ENST00000530277 CCDC179H3BU77 68 aa9.02□□□□□ -0.97
SCN3B-206ENST00000530277 CMC4P56277 68 aaPredicted RBP9.02□□□□□ -0.97
SCN3B-206ENST00000530277 C9orf153Q5TBE3 101 aa9.02□□□□□ -0.97
SCN3B-206ENST00000530277 LINC01006Q8NI28 216 aa9.02□□□□□ -0.97
SCN3B-206ENST00000530277 IGLV4-69A0A075B6H9 119 aa9.02□□□□□ -0.97
SCN3B-206ENST00000530277 TRIAP1O43715 76 aa9.02□□□□□ -0.97
SCN3B-206ENST00000530277 RBMY1FQ15415 496 aaKnown RBP9.02□□□□□ -0.97
SCN3B-206ENST00000530277 POM121L12Q8N7R1 296 aa9.02□□□□□ -0.97
SCN3B-206ENST00000530277 ZMAT4Q9H898 229 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms