RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 SVILO95425 2214 aa2.73□□□□□ -1.97
USP47-209ENST00000530041 IGLV4-69A0A075B6H9 119 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 TRAV26-2A0A0B4J265 109 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 IGIPA6NJ69 53 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 ZNF815PA8K554 130 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 A8MWV9 139 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 LGALS9O00182 355 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 TCL1BO95988 128 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 IGHV3-30P01768 117 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 ATP5G1P05496 136 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 ZNF688P0C7X2 276 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 IGHV3-30-5P0DP03 117 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 DAD1P61803 113 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 PRB3Q04118 309 aaPredicted RBP2.72□□□□□ -1.97
USP47-209ENST00000530041 SPANXN1Q5VSR9 72 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 Q6Q795 121 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 ZFP2Q6ZN57 461 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 FAM19A3Q7Z5A8 133 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 GPHB5Q86YW7 130 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 C10orf126Q8N4M7 172 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 ZFAND2AQ8N6M9 145 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 SLC25A29Q8N8R3 303 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 ZNRF2Q8NHG8 242 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 TMEM141Q96I45 108 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 LINC00477Q96M19 166 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 AMELXQ99217 191 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 C8orf17Q9NRJ1 99 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 LAMA3Q16787 3333 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 ICE1Q9Y2F5 2266 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 ZGRF1Q86YA3 2104 aa2.72□□□□□ -1.97
USP47-209ENST00000530041 LAMA2P24043 3122 aaKnown RBP2.72□□□□□ -1.97
USP47-209ENST00000530041 TRAV21A0A0B4J279 112 aa2.71□□□□□ -1.98
USP47-209ENST00000530041 A0A0B4J2C4 111 aa2.71□□□□□ -1.98
USP47-209ENST00000530041 A0A0J9YX75 114 aa2.71□□□□□ -1.98
USP47-209ENST00000530041 TRBV6-5A0A0K0K1A5 114 aa2.71□□□□□ -1.98
USP47-209ENST00000530041 C11orf86A6NJI1 115 aa2.71□□□□□ -1.98
USP47-209ENST00000530041 LYNX1G3V0Z9 82 aa2.71□□□□□ -1.98
USP47-209ENST00000530041 H3BVH4 76 aa2.71□□□□□ -1.98
USP47-209ENST00000530041 OVOL1O14753 267 aa2.71□□□□□ -1.98
USP47-209ENST00000530041 IGHV3-33P01772 117 aa2.71□□□□□ -1.98
USP47-209ENST00000530041 P0DMU3 169 aa2.71□□□□□ -1.98
USP47-209ENST00000530041 FAM231AP0DMU4 169 aa2.71□□□□□ -1.98
USP47-209ENST00000530041 FAM231CP0DMU5 169 aa2.71□□□□□ -1.98
USP47-209ENST00000530041 LYNX1P0DP58 116 aa2.71□□□□□ -1.98
USP47-209ENST00000530041 ASIPP42127 132 aa2.71□□□□□ -1.98
USP47-209ENST00000530041 POLR2KP53803 58 aaKnown RBP2.71□□□□□ -1.98
USP47-209ENST00000530041 PRR9Q5T870 116 aa2.71□□□□□ -1.98
USP47-209ENST00000530041 ZFAND6Q6FIF0 208 aa2.71□□□□□ -1.98
USP47-209ENST00000530041 VMO1Q7Z5L0 202 aa2.71□□□□□ -1.98
USP47-209ENST00000530041 RNF182Q8N6D2 247 aa2.71□□□□□ -1.98
USP47-209ENST00000530041 ANKRD29Q8N6D5 301 aa2.71□□□□□ -1.98
USP47-209ENST00000530041 PRO1854Q9UHT4 67 aa2.71□□□□□ -1.98
USP47-209ENST00000530041 UFC1Q9Y3C8 167 aa2.71□□□□□ -1.98
USP47-209ENST00000530041 URB1O60287 2271 aaKnown RBP2.71□□□□□ -1.98
USP47-209ENST00000530041 TRBV7-1A0A0A6YYK4 115 aa2.7□□□□□ -1.98
USP47-209ENST00000530041 LOC107984156A0A0G2JMH3 177 aa2.7□□□□□ -1.98
USP47-209ENST00000530041 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
USP47-209ENST00000530041 RNASE3P12724 160 aaKnown RBP2.7□□□□□ -1.98
USP47-209ENST00000530041 TSPEAR-AS2P59090 65 aa2.7□□□□□ -1.98
USP47-209ENST00000530041 HES1Q14469 280 aa2.7□□□□□ -1.98
USP47-209ENST00000530041 RNASE13Q5GAN3 156 aaKnown RBP2.7□□□□□ -1.98
USP47-209ENST00000530041 Q6ZQT7 251 aa2.7□□□□□ -1.98
USP47-209ENST00000530041 ARL17AQ8IVW1 177 aa2.7□□□□□ -1.98
USP47-209ENST00000530041 TMEM86BQ8N661 226 aa2.7□□□□□ -1.98
USP47-209ENST00000530041 C15orf56Q8N910 161 aa2.7□□□□□ -1.98
USP47-209ENST00000530041 DEFB124Q8NES8 71 aa2.7□□□□□ -1.98
USP47-209ENST00000530041 TMEM263Q8WUH6 116 aaKnown RBP2.7□□□□□ -1.98
USP47-209ENST00000530041 RPL39LQ96EH5 51 aaKnown RBP2.7□□□□□ -1.98
USP47-209ENST00000530041 SND1-IT1Q9HBX3 110 aa2.7□□□□□ -1.98
USP47-209ENST00000530041 SPANXA1Q9NS26 97 aa2.7□□□□□ -1.98
USP47-209ENST00000530041 IGHV3OR16-8A0A075B7F1 116 aa2.69□□□□□ -1.98
USP47-209ENST00000530041 TRBV30A0A0K0K1B3 111 aa2.69□□□□□ -1.98
USP47-209ENST00000530041 TRBV27A0A0K0K1C4 114 aa2.69□□□□□ -1.98
USP47-209ENST00000530041 TMEM223A0PJW6 202 aa2.69□□□□□ -1.98
USP47-209ENST00000530041 SDHAF1A6NFY7 115 aa2.69□□□□□ -1.98
USP47-209ENST00000530041 J3QQQ9 107 aa2.69□□□□□ -1.98
USP47-209ENST00000530041 M0R2P5 195 aa2.69□□□□□ -1.98
USP47-209ENST00000530041 BPY2O14599 106 aa2.69□□□□□ -1.98
USP47-209ENST00000530041 LEPROTO15243 131 aa2.69□□□□□ -1.98
USP47-209ENST00000530041 SLC25A20O43772 301 aa2.69□□□□□ -1.98
USP47-209ENST00000530041 IGHV1-69P01742 117 aa2.69□□□□□ -1.98
USP47-209ENST00000530041 CMC4P56277 68 aaPredicted RBP2.69□□□□□ -1.98
USP47-209ENST00000530041 RHOHQ15669 191 aa2.69□□□□□ -1.98
USP47-209ENST00000530041 DEFB121Q5J5C9 76 aa2.69□□□□□ -1.98
USP47-209ENST00000530041 TEX29Q8N6K0 151 aa2.69□□□□□ -1.98
USP47-209ENST00000530041 CDH23Q9H251 3354 aa2.69□□□□□ -1.98
USP47-209ENST00000530041 GPR179Q6PRD1 2367 aa2.69□□□□□ -1.98
USP47-209ENST00000530041 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.68□□□□□ -1.98
USP47-209ENST00000530041 TRBV10-2A0A0K0K1G8 114 aa2.68□□□□□ -1.98
USP47-209ENST00000530041 SPRR5A0A1B0GTR4 108 aa2.68□□□□□ -1.98
USP47-209ENST00000530041 FAM223BA6NKX1 122 aa2.68□□□□□ -1.98
USP47-209ENST00000530041 C9JAW5 83 aa2.68□□□□□ -1.98
USP47-209ENST00000530041 NDUFA4O00483 81 aa2.68□□□□□ -1.98
USP47-209ENST00000530041 MGPP08493 103 aa2.68□□□□□ -1.98
USP47-209ENST00000530041 S100A4P26447 101 aaKnown RBP2.68□□□□□ -1.98
USP47-209ENST00000530041 RNASE4P34096 147 aaKnown RBP2.68□□□□□ -1.98
USP47-209ENST00000530041 ATXN8Q156A1 80 aa2.68□□□□□ -1.98
USP47-209ENST00000530041 Q6ZRU5 148 aa2.68□□□□□ -1.98
USP47-209ENST00000530041 NTM-AS1Q6ZSK4 140 aa2.68□□□□□ -1.98
USP47-209ENST00000530041 FAM223AQ8IWN6 122 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms