RNA–Protein interactions for RNA: ENST00000528948.1

CAPRIN1-206, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-206ENST00000528948 G3V318 75 aa6.5□□□□□ -1.37
CAPRIN1-206ENST00000528948 MUC7Q8TAX7 377 aa6.5□□□□□ -1.37
CAPRIN1-206ENST00000528948 SMIM11BQ8TCY0 68 aa6.5□□□□□ -1.37
CAPRIN1-206ENST00000528948 ARRDC1-AS1Q9H2J1 176 aa6.5□□□□□ -1.37
CAPRIN1-206ENST00000528948 Q9HAA7 133 aa6.5□□□□□ -1.37
CAPRIN1-206ENST00000528948 A0A087WVE0 104 aa6.49□□□□□ -1.37
CAPRIN1-206ENST00000528948 A8MTW9 85 aa6.49□□□□□ -1.37
CAPRIN1-206ENST00000528948 ZNF561-AS1K7EIQ3 104 aa6.49□□□□□ -1.37
CAPRIN1-206ENST00000528948 LECT2O14960 151 aa6.49□□□□□ -1.37
CAPRIN1-206ENST00000528948 LCE5AQ5TCM9 118 aa6.49□□□□□ -1.37
CAPRIN1-206ENST00000528948 UNQ9165/PRO28630Q6UXU0 137 aa6.49□□□□□ -1.37
CAPRIN1-206ENST00000528948 C1orf158Q8N1D5 194 aa6.49□□□□□ -1.37
CAPRIN1-206ENST00000528948 NACAE9PAV3 2078 aa6.48□□□□□ -1.37
CAPRIN1-206ENST00000528948 UNC80Q8N2C7 3258 aa6.48□□□□□ -1.37
CAPRIN1-206ENST00000528948 K7EQG2 157 aa6.48□□□□□ -1.37
CAPRIN1-206ENST00000528948 RPL35AP18077 110 aaKnown RBP6.48□□□□□ -1.37
CAPRIN1-206ENST00000528948 RPL36AP83881 106 aaKnown RBP6.48□□□□□ -1.37
CAPRIN1-206ENST00000528948 COX7B2Q8TF08 81 aa6.48□□□□□ -1.37
CAPRIN1-206ENST00000528948 RPL36ALQ969Q0 106 aaKnown RBP6.48□□□□□ -1.37
CAPRIN1-206ENST00000528948 AHCTF1Q8WYP5 2266 aa6.48□□□□□ -1.37
CAPRIN1-206ENST00000528948 ARHGAP32A7KAX9 2087 aa6.48□□□□□ -1.37
CAPRIN1-206ENST00000528948 TRAV23DV6A0A075B6W5 121 aa6.47□□□□□ -1.37
CAPRIN1-206ENST00000528948 IGHV3OR16-12A0A075B7B8 117 aa6.47□□□□□ -1.37
CAPRIN1-206ENST00000528948 A0A087WYN8 130 aa6.47□□□□□ -1.37
CAPRIN1-206ENST00000528948 TRBV6-4A0A1B0GX49 114 aa6.47□□□□□ -1.37
CAPRIN1-206ENST00000528948 RBM3P98179 157 aaKnown RBP6.47□□□□□ -1.37
CAPRIN1-206ENST00000528948 PRB3Q04118 309 aaPredicted RBP6.47□□□□□ -1.37
CAPRIN1-206ENST00000528948 MIR7-3HGQ8N6C7 128 aa6.47□□□□□ -1.37
CAPRIN1-206ENST00000528948 C11orf68Q9H3H3 251 aaKnown RBP6.47□□□□□ -1.37
CAPRIN1-206ENST00000528948 C16orf95Q9H693 158 aa6.47□□□□□ -1.37
CAPRIN1-206ENST00000528948 SDK1Q7Z5N4 2213 aa6.47□□□□□ -1.37
CAPRIN1-206ENST00000528948 C5orf42Q9H799 3197 aa6.46□□□□□ -1.38
CAPRIN1-206ENST00000528948 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.46□□□□□ -1.38
CAPRIN1-206ENST00000528948 TRBV7-6A0A0J9YX20 115 aa6.46□□□□□ -1.38
CAPRIN1-206ENST00000528948 IGKV2-29A2NJV5 120 aaPredicted RBP6.46□□□□□ -1.38
CAPRIN1-206ENST00000528948 K7EQD1 137 aa6.46□□□□□ -1.38
CAPRIN1-206ENST00000528948 SAA4P35542 130 aa6.46□□□□□ -1.38
CAPRIN1-206ENST00000528948 ENHOQ6UWT2 76 aa6.46□□□□□ -1.38
CAPRIN1-206ENST00000528948 LINC00337Q8N6G1 96 aa6.46□□□□□ -1.38
CAPRIN1-206ENST00000528948 A8MZ25 164 aa6.45□□□□□ -1.38
CAPRIN1-206ENST00000528948 LYNX1G3V0Z9 82 aa6.45□□□□□ -1.38
CAPRIN1-206ENST00000528948 LYNX1P0DP58 116 aa6.45□□□□□ -1.38
CAPRIN1-206ENST00000528948 IGKV2-28A0A075B6P5 120 aa6.44□□□□□ -1.38
CAPRIN1-206ENST00000528948 NCR3O14931 201 aa6.44□□□□□ -1.38
CAPRIN1-206ENST00000528948 UBE2L6O14933 153 aa6.44□□□□□ -1.38
CAPRIN1-206ENST00000528948 IGKV2D-28P01615 120 aa6.44□□□□□ -1.38
CAPRIN1-206ENST00000528948 IGHV4-38-2P0DP08 117 aa6.44□□□□□ -1.38
CAPRIN1-206ENST00000528948 LINC00158P58513 81 aa6.44□□□□□ -1.38
CAPRIN1-206ENST00000528948 C6orf226Q5I0X4 101 aa6.44□□□□□ -1.38
CAPRIN1-206ENST00000528948 Q8N814 137 aa6.44□□□□□ -1.38
CAPRIN1-206ENST00000528948 CDC42SE2Q9NRR3 84 aa6.44□□□□□ -1.38
CAPRIN1-206ENST00000528948 PLAC8L1A1L4L8 177 aa6.43□□□□□ -1.38
CAPRIN1-206ENST00000528948 F8WEM9 126 aa6.43□□□□□ -1.38
CAPRIN1-206ENST00000528948 MIFP14174 115 aa6.43□□□□□ -1.38
CAPRIN1-206ENST00000528948 HOXD3P31249 432 aaPredicted RBP6.43□□□□□ -1.38
CAPRIN1-206ENST00000528948 COX6A2Q02221 97 aa6.43□□□□□ -1.38
CAPRIN1-206ENST00000528948 COX17Q14061 63 aa6.43□□□□□ -1.38
CAPRIN1-206ENST00000528948 SPINK13Q1W4C9 94 aa6.43□□□□□ -1.38
CAPRIN1-206ENST00000528948 C9orf66Q5T8R8 295 aa6.43□□□□□ -1.38
CAPRIN1-206ENST00000528948 C11orf71Q6IPW1 123 aa6.43□□□□□ -1.38
CAPRIN1-206ENST00000528948 PRR15Q8IV56 129 aa6.43□□□□□ -1.38
CAPRIN1-206ENST00000528948 URB1O60287 2271 aaKnown RBP6.43□□□□□ -1.38
CAPRIN1-206ENST00000528948 DNAH14Q0VDD8 3507 aa6.42□□□□□ -1.38
CAPRIN1-206ENST00000528948 CCL18P55774 89 aa6.42□□□□□ -1.38
CAPRIN1-206ENST00000528948 RNASE13Q5GAN3 156 aaKnown RBP6.42□□□□□ -1.38
CAPRIN1-206ENST00000528948 FP248Q71RG6 208 aaPredicted RBP6.42□□□□□ -1.38
CAPRIN1-206ENST00000528948 BRK1Q8WUW1 75 aa6.42□□□□□ -1.38
CAPRIN1-206ENST00000528948 PKIGQ9Y2B9 76 aa6.42□□□□□ -1.38
CAPRIN1-206ENST00000528948 LYRM9A8MSI8 78 aa6.41□□□□□ -1.38
CAPRIN1-206ENST00000528948 C6orf223Q8N319 242 aa6.41□□□□□ -1.38
CAPRIN1-206ENST00000528948 DEFB104AQ8WTQ1 72 aa6.41□□□□□ -1.38
CAPRIN1-206ENST00000528948 ICE1Q9Y2F5 2266 aa6.41□□□□□ -1.38
CAPRIN1-206ENST00000528948 A0A0U1RRA0 63 aa6.4□□□□□ -1.38
CAPRIN1-206ENST00000528948 INSP01308 110 aa6.4□□□□□ -1.38
CAPRIN1-206ENST00000528948 NBL1P41271 181 aa6.4□□□□□ -1.38
CAPRIN1-206ENST00000528948 LINC01547P58512 204 aaPredicted RBP6.4□□□□□ -1.38
CAPRIN1-206ENST00000528948 SS18Q15532 418 aa6.4□□□□□ -1.38
CAPRIN1-206ENST00000528948 ESRGQ1W209 222 aa6.4□□□□□ -1.38
CAPRIN1-206ENST00000528948 Q6ZQT0 140 aa6.4□□□□□ -1.38
CAPRIN1-206ENST00000528948 FAM19A1Q7Z5A9 133 aa6.4□□□□□ -1.38
CAPRIN1-206ENST00000528948 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.4□□□□□ -1.38
CAPRIN1-206ENST00000528948 A0A087WZ39 114 aa6.39□□□□□ -1.39
CAPRIN1-206ENST00000528948 TRBV7-4A0A0J9YYF1 115 aa6.39□□□□□ -1.39
CAPRIN1-206ENST00000528948 HILS1P60008 231 aa6.39□□□□□ -1.39
CAPRIN1-206ENST00000528948 DEFB1P60022 68 aa6.39□□□□□ -1.39
CAPRIN1-206ENST00000528948 Q6ZRU5 148 aa6.39□□□□□ -1.39
CAPRIN1-206ENST00000528948 WDR87Q6ZQQ6 2873 aa6.39□□□□□ -1.39
CAPRIN1-206ENST00000528948 IGKV3-7A0A075B6H7 116 aa6.38□□□□□ -1.39
CAPRIN1-206ENST00000528948 A0A1B0GW54 56 aa6.38□□□□□ -1.39
CAPRIN1-206ENST00000528948 A6NDX4 124 aa6.38□□□□□ -1.39
CAPRIN1-206ENST00000528948 ZFP36P26651 326 aaKnown RBP6.38□□□□□ -1.39
CAPRIN1-206ENST00000528948 PMAIP1Q13794 54 aa6.38□□□□□ -1.39
CAPRIN1-206ENST00000528948 LPAL2Q16609 132 aa6.38□□□□□ -1.39
CAPRIN1-206ENST00000528948 DEFB114Q30KQ6 69 aa6.38□□□□□ -1.39
CAPRIN1-206ENST00000528948 Q8NA96 180 aa6.38□□□□□ -1.39
CAPRIN1-206ENST00000528948 CUL9Q8IWT3 2517 aa6.38□□□□□ -1.39
CAPRIN1-206ENST00000528948 RANBP2P49792 3224 aaKnown RBP6.38□□□□□ -1.39
CAPRIN1-206ENST00000528948 IGHV3-73A0A0B4J1V6 119 aa6.37□□□□□ -1.39
CAPRIN1-206ENST00000528948 IGHV3-11P01762 117 aa6.37□□□□□ -1.39
CAPRIN1-206ENST00000528948 Q8IZM0 81 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms