RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 RTL8CO15255 209 aa9.64□□□□□ -0.87
UBXN1-209ENST00000528907 MRPS36P82909 103 aaKnown RBP9.64□□□□□ -0.87
UBXN1-209ENST00000528907 C2orf66Q6UXQ4 117 aa9.64□□□□□ -0.87
UBXN1-209ENST00000528907 LINC00336Q6ZUF6 198 aa9.64□□□□□ -0.87
UBXN1-209ENST00000528907 LINC00269Q8N2A0 174 aa9.64□□□□□ -0.87
UBXN1-209ENST00000528907 OR5A1Q8NGJ0 315 aa9.64□□□□□ -0.87
UBXN1-209ENST00000528907 RMI2Q96E14 147 aa9.64□□□□□ -0.87
UBXN1-209ENST00000528907 AP5S1Q9NUS5 200 aa9.64□□□□□ -0.87
UBXN1-209ENST00000528907 CYSLTR1Q9Y271 337 aa9.64□□□□□ -0.87
UBXN1-209ENST00000528907 COX11Q9Y6N1 276 aa9.64□□□□□ -0.87
UBXN1-209ENST00000528907 TRAV8-4A0A0B4J246 113 aa9.63□□□□□ -0.87
UBXN1-209ENST00000528907 CRPP02741 224 aa9.63□□□□□ -0.87
UBXN1-209ENST00000528907 RPL39P62891 51 aaKnown RBP9.63□□□□□ -0.87
UBXN1-209ENST00000528907 REG3AQ06141 175 aa9.63□□□□□ -0.87
UBXN1-209ENST00000528907 DGAT2L7PQ6IED9 249 aa9.63□□□□□ -0.87
UBXN1-209ENST00000528907 ZNF664Q8N3J9 261 aa9.63□□□□□ -0.87
UBXN1-209ENST00000528907 UBE2WQ96B02 151 aa9.63□□□□□ -0.87
UBXN1-209ENST00000528907 TOMM6Q96B49 74 aa9.63□□□□□ -0.87
UBXN1-209ENST00000528907 CHCHD1Q96BP2 118 aaKnown RBP9.63□□□□□ -0.87
UBXN1-209ENST00000528907 FAM104AQ969W3 186 aa9.62□□□□□ -0.87
UBXN1-209ENST00000528907 TM2D2Q9BX73 214 aa9.62□□□□□ -0.87
UBXN1-209ENST00000528907 KIAA1109Q2LD37 5005 aa9.62□□□□□ -0.87
UBXN1-209ENST00000528907 DNAH2Q9P225 4427 aa9.62□□□□□ -0.87
UBXN1-209ENST00000528907 IGIPA6NJ69 53 aa9.61□□□□□ -0.87
UBXN1-209ENST00000528907 CCL25O15444 150 aa9.61□□□□□ -0.87
UBXN1-209ENST00000528907 TIMM17AQ99595 171 aa9.61□□□□□ -0.87
UBXN1-209ENST00000528907 Q9HAA7 133 aa9.6□□□□□ -0.87
UBXN1-209ENST00000528907 A0A096LNJ9 63 aa9.59□□□□□ -0.87
UBXN1-209ENST00000528907 KRTAP26-1Q6PEX3 210 aa9.59□□□□□ -0.87
UBXN1-209ENST00000528907 Q6ZUT4 128 aa9.59□□□□□ -0.87
UBXN1-209ENST00000528907 ERASQ7Z444 233 aa9.59□□□□□ -0.87
UBXN1-209ENST00000528907 C1orf43Q9BWL3 253 aa9.59□□□□□ -0.87
UBXN1-209ENST00000528907 IGLV4-3A0A075B6K6 122 aa9.58□□□□□ -0.88
UBXN1-209ENST00000528907 HIST1H2BKO60814 126 aa9.58□□□□□ -0.88
UBXN1-209ENST00000528907 HBDP02042 147 aa9.58□□□□□ -0.88
UBXN1-209ENST00000528907 HIST1H2BJP06899 126 aa9.58□□□□□ -0.88
UBXN1-209ENST00000528907 HIST1H2BOP23527 126 aa9.58□□□□□ -0.88
UBXN1-209ENST00000528907 HIST1H2BBP33778 126 aa9.58□□□□□ -0.88
UBXN1-209ENST00000528907 HIST1H2BDP58876 126 aa9.58□□□□□ -0.88
UBXN1-209ENST00000528907 HIST1H2BCP62807 126 aa9.58□□□□□ -0.88
UBXN1-209ENST00000528907 HIST2H2BEQ16778 126 aa9.58□□□□□ -0.88
UBXN1-209ENST00000528907 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.58□□□□□ -0.88
UBXN1-209ENST00000528907 BAGE3Q86Y29 109 aa9.58□□□□□ -0.88
UBXN1-209ENST00000528907 HIST1H2BHQ93079 126 aa9.58□□□□□ -0.88
UBXN1-209ENST00000528907 TMEM141Q96I45 108 aa9.58□□□□□ -0.88
UBXN1-209ENST00000528907 HIST1H2BNQ99877 126 aa9.58□□□□□ -0.88
UBXN1-209ENST00000528907 HIST1H2BMQ99879 126 aa9.58□□□□□ -0.88
UBXN1-209ENST00000528907 DNAH17Q9UFH2 4485 aa9.57□□□□□ -0.88
UBXN1-209ENST00000528907 IGKV2D-24A0A075B6R9 120 aa9.57□□□□□ -0.88
UBXN1-209ENST00000528907 LINC00959A0A1B0GUT2 108 aa9.57□□□□□ -0.88
UBXN1-209ENST00000528907 PAPPA-AS1Q5QFB9 102 aa9.57□□□□□ -0.88
UBXN1-209ENST00000528907 CLPSL2Q6UWE3 100 aa9.57□□□□□ -0.88
UBXN1-209ENST00000528907 AMELXQ99217 191 aa9.57□□□□□ -0.88
UBXN1-209ENST00000528907 DNAH10Q8IVF4 4471 aa9.57□□□□□ -0.88
UBXN1-209ENST00000528907 LINC00310P59036 64 aa9.56□□□□□ -0.88
UBXN1-209ENST00000528907 PDZD11Q5EBL8 140 aa9.56□□□□□ -0.88
UBXN1-209ENST00000528907 HECTD4Q9Y4D8 3996 aa9.55□□□□□ -0.88
UBXN1-209ENST00000528907 LRCOL1A6NCL2 159 aa9.55□□□□□ -0.88
UBXN1-209ENST00000528907 PRSS29PA6NIE9 313 aa9.55□□□□□ -0.88
UBXN1-209ENST00000528907 C1orf196B1AJZ1 125 aa9.55□□□□□ -0.88
UBXN1-209ENST00000528907 PSCAO43653 123 aa9.55□□□□□ -0.88
UBXN1-209ENST00000528907 HSBP1O75506 76 aa9.55□□□□□ -0.88
UBXN1-209ENST00000528907 TNP2Q05952 138 aa9.55□□□□□ -0.88
UBXN1-209ENST00000528907 SS18Q15532 418 aa9.55□□□□□ -0.88
UBXN1-209ENST00000528907 Q6ZN92 141 aa9.55□□□□□ -0.88
UBXN1-209ENST00000528907 MAPKAPK5-AS1Q8N8E1 139 aa9.55□□□□□ -0.88
UBXN1-209ENST00000528907 SCGB3A1Q96QR1 104 aa9.55□□□□□ -0.88
UBXN1-209ENST00000528907 OPRPNQ99935 248 aaPredicted RBP9.55□□□□□ -0.88
UBXN1-209ENST00000528907 SERF1AO75920 110 aa9.54□□□□□ -0.88
UBXN1-209ENST00000528907 COA6Q5JTJ3 125 aaKnown RBP9.54□□□□□ -0.88
UBXN1-209ENST00000528907 TEX43Q6ZNM6 134 aa9.54□□□□□ -0.88
UBXN1-209ENST00000528907 FAM19A3Q7Z5A8 133 aa9.54□□□□□ -0.88
UBXN1-209ENST00000528907 VCX2Q9H322 139 aa9.54□□□□□ -0.88
UBXN1-209ENST00000528907 A0A087WTM6 91 aa9.53□□□□□ -0.88
UBXN1-209ENST00000528907 LINC00173Q6ZV60 143 aa9.53□□□□□ -0.88
UBXN1-209ENST00000528907 CHCHD10Q8WYQ3 142 aaPredicted RBP9.53□□□□□ -0.88
UBXN1-209ENST00000528907 IGLV10-54A0A075B6I4 117 aa9.52□□□□□ -0.89
UBXN1-209ENST00000528907 IGKV3OR2-268A0A0C4DH90 116 aa9.52□□□□□ -0.89
UBXN1-209ENST00000528907 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.52□□□□□ -0.89
UBXN1-209ENST00000528907 ATP5LO75964 103 aa9.52□□□□□ -0.89
UBXN1-209ENST00000528907 RNASE13Q5GAN3 156 aaKnown RBP9.52□□□□□ -0.89
UBXN1-209ENST00000528907 CD164L2Q6UWJ8 174 aa9.52□□□□□ -0.89
UBXN1-209ENST00000528907 C2orf88Q9BSF0 95 aa9.52□□□□□ -0.89
UBXN1-209ENST00000528907 A0A1B0GVY2 172 aa9.51□□□□□ -0.89
UBXN1-209ENST00000528907 GAGE12HA6NDE8 117 aa9.51□□□□□ -0.89
UBXN1-209ENST00000528907 IFITM10A6NMD0 228 aa9.51□□□□□ -0.89
UBXN1-209ENST00000528907 UBE2D1P51668 147 aa9.51□□□□□ -0.89
UBXN1-209ENST00000528907 FOXI1Q12951 378 aa9.51□□□□□ -0.89
UBXN1-209ENST00000528907 PMCHL1Q16048 86 aa9.51□□□□□ -0.89
UBXN1-209ENST00000528907 FAT2Q9NYQ8 4349 aa9.5□□□□□ -0.89
UBXN1-209ENST00000528907 TRAV13-1A0A0B4J241 112 aa9.5□□□□□ -0.89
UBXN1-209ENST00000528907 NUPR1O60356 82 aa9.5□□□□□ -0.89
UBXN1-209ENST00000528907 PMVKQ15126 192 aa9.5□□□□□ -0.89
UBXN1-209ENST00000528907 BAALCQ8WXS3 180 aa9.5□□□□□ -0.89
UBXN1-209ENST00000528907 EREGO14944 169 aa9.49□□□□□ -0.89
UBXN1-209ENST00000528907 SEC11AP67812 179 aa9.49□□□□□ -0.89
UBXN1-209ENST00000528907 LINC00242Q5T6M2 205 aa9.49□□□□□ -0.89
UBXN1-209ENST00000528907 PACRGQ96M98 296 aaPredicted RBP9.49□□□□□ -0.89
UBXN1-209ENST00000528907 IGHV3OR16-9A0A0B4J2B5 98 aa9.48□□□□□ -0.89
UBXN1-209ENST00000528907 XCL1P47992 114 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms