RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 C3orf56Q8N813 242 aa9.46□□□□□ -0.89
RBM39-243ENST00000528062 A8MWV9 139 aa9.46□□□□□ -0.9
RBM39-243ENST00000528062 PRM2P04554 102 aa9.46□□□□□ -0.9
RBM39-243ENST00000528062 CEMP1Q6PRD7 247 aaPredicted RBP9.46□□□□□ -0.9
RBM39-243ENST00000528062 VCX2Q9H322 139 aa9.46□□□□□ -0.9
RBM39-243ENST00000528062 Q9UF83 564 aa9.46□□□□□ -0.9
RBM39-243ENST00000528062 H7C2G1 150 aa9.45□□□□□ -0.9
RBM39-243ENST00000528062 SLURP1P55000 103 aa9.45□□□□□ -0.9
RBM39-243ENST00000528062 A0A1B0GV72 72 aa9.45□□□□□ -0.9
RBM39-243ENST00000528062 HOXD3P31249 432 aaPredicted RBP9.45□□□□□ -0.9
RBM39-243ENST00000528062 KRTAP21-3Q3LHN1 58 aa9.45□□□□□ -0.9
RBM39-243ENST00000528062 Q6ZUT4 128 aa9.45□□□□□ -0.9
RBM39-243ENST00000528062 A0A0J9YXY3 114 aa9.44□□□□□ -0.9
RBM39-243ENST00000528062 M0R2P5 195 aa9.44□□□□□ -0.9
RBM39-243ENST00000528062 CCL24O00175 119 aa9.44□□□□□ -0.9
RBM39-243ENST00000528062 SPINK8P0C7L1 97 aa9.44□□□□□ -0.9
RBM39-243ENST00000528062 HTN1P15515 57 aa9.44□□□□□ -0.9
RBM39-243ENST00000528062 CRYBA4P53673 196 aa9.44□□□□□ -0.9
RBM39-243ENST00000528062 SORL1Q92673 2214 aa9.44□□□□□ -0.9
RBM39-243ENST00000528062 KNCNA6PVL3 124 aa9.44□□□□□ -0.9
RBM39-243ENST00000528062 CKS1BP61024 79 aa9.44□□□□□ -0.9
RBM39-243ENST00000528062 RNASE13Q5GAN3 156 aaKnown RBP9.44□□□□□ -0.9
RBM39-243ENST00000528062 LITAFQ99732 161 aa9.44□□□□□ -0.9
RBM39-243ENST00000528062 SPXQ9BT56 116 aa9.44□□□□□ -0.9
RBM39-243ENST00000528062 TRAV8-3A0A0A6YYJ7 113 aa9.43□□□□□ -0.9
RBM39-243ENST00000528062 A0A0B4J2C4 111 aa9.43□□□□□ -0.9
RBM39-243ENST00000528062 IGHV3-30-3P0DP02 117 aa9.43□□□□□ -0.9
RBM39-243ENST00000528062 SHISA2Q6UWI4 295 aa9.43□□□□□ -0.9
RBM39-243ENST00000528062 ERG28Q9UKR5 140 aa9.43□□□□□ -0.9
RBM39-243ENST00000528062 TRGV11A0A075B6L2 103 aa9.43□□□□□ -0.9
RBM39-243ENST00000528062 C9JAW5 83 aa9.43□□□□□ -0.9
RBM39-243ENST00000528062 SLC25A20O43772 301 aa9.43□□□□□ -0.9
RBM39-243ENST00000528062 Q6ZSN1 163 aa9.42□□□□□ -0.9
RBM39-243ENST00000528062 RBMY1BA6NDE4 496 aaKnown RBP9.41□□□□□ -0.9
RBM39-243ENST00000528062 RBMY1EA6NEQ0 496 aaKnown RBP9.41□□□□□ -0.9
RBM39-243ENST00000528062 RBMY1DP0C7P1 496 aaKnown RBP9.41□□□□□ -0.9
RBM39-243ENST00000528062 MRPS36P82909 103 aaKnown RBP9.41□□□□□ -0.9
RBM39-243ENST00000528062 C4orf48Q5BLP8 95 aa9.41□□□□□ -0.9
RBM39-243ENST00000528062 LINC00482Q8N8I6 264 aa9.41□□□□□ -0.9
RBM39-243ENST00000528062 PYGO1Q9Y3Y4 419 aa9.41□□□□□ -0.9
RBM39-243ENST00000528062 A8MZ25 164 aa9.41□□□□□ -0.9
RBM39-243ENST00000528062 ADAMTSL4-AS1Q5T5F5 129 aa9.41□□□□□ -0.9
RBM39-243ENST00000528062 TIMM21Q9BVV7 248 aa9.41□□□□□ -0.9
RBM39-243ENST00000528062 EDA2RQ9HAV5 297 aa9.41□□□□□ -0.9
RBM39-243ENST00000528062 DNAH3Q8TD57 4116 aa9.4□□□□□ -0.9
RBM39-243ENST00000528062 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.39□□□□□ -0.91
RBM39-243ENST00000528062 DEFB131AP59861 70 aa9.39□□□□□ -0.91
RBM39-243ENST00000528062 Q1RN00 199 aa9.39□□□□□ -0.91
RBM39-243ENST00000528062 CHCHD7Q9BUK0 85 aa9.39□□□□□ -0.91
RBM39-243ENST00000528062 TRIAP1O43715 76 aa9.39□□□□□ -0.91
RBM39-243ENST00000528062 IGHV1-58A0A0C4DH39 117 aa9.38□□□□□ -0.91
RBM39-243ENST00000528062 GEMIN7Q9H840 131 aaKnown RBP9.38□□□□□ -0.91
RBM39-243ENST00000528062 TNFRSF18Q9Y5U5 241 aa9.38□□□□□ -0.91
RBM39-243ENST00000528062 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.37□□□□□ -0.91
RBM39-243ENST00000528062 IGKV2-29A2NJV5 120 aaPredicted RBP9.37□□□□□ -0.91
RBM39-243ENST00000528062 M0QXV9 152 aa9.37□□□□□ -0.91
RBM39-243ENST00000528062 LINC01620Q4KN68 170 aa9.37□□□□□ -0.91
RBM39-243ENST00000528062 NOTCH3Q9UM47 2321 aa9.37□□□□□ -0.91
RBM39-243ENST00000528062 H3BMM0 161 aa9.37□□□□□ -0.91
RBM39-243ENST00000528062 PRSS2P07478 247 aa9.37□□□□□ -0.91
RBM39-243ENST00000528062 NDUFA12Q9UI09 145 aa9.37□□□□□ -0.91
RBM39-243ENST00000528062 UBE2D4Q9Y2X8 147 aa9.37□□□□□ -0.91
RBM39-243ENST00000528062 NPC2P61916 151 aa9.36□□□□□ -0.91
RBM39-243ENST00000528062 NTN5Q8WTR8 489 aaPredicted RBP9.36□□□□□ -0.91
RBM39-243ENST00000528062 VSIG2Q96IQ7 327 aa9.36□□□□□ -0.91
RBM39-243ENST00000528062 A8MTW9 85 aa9.36□□□□□ -0.91
RBM39-243ENST00000528062 ATXN8Q156A1 80 aa9.36□□□□□ -0.91
RBM39-243ENST00000528062 LINC00467Q9BRT7 94 aa9.36□□□□□ -0.91
RBM39-243ENST00000528062 TRAV26-1A0A087WT03 109 aa9.35□□□□□ -0.91
RBM39-243ENST00000528062 IGHV3-38A0A0C4DH36 116 aa9.35□□□□□ -0.91
RBM39-243ENST00000528062 TRBV30A0A0K0K1B3 111 aa9.35□□□□□ -0.91
RBM39-243ENST00000528062 TINCRA0A1B0GVN0 87 aa9.35□□□□□ -0.91
RBM39-243ENST00000528062 SPANXDQ9BXN6 97 aa9.35□□□□□ -0.91
RBM39-243ENST00000528062 SPANXCQ9NY87 97 aa9.35□□□□□ -0.91
RBM39-243ENST00000528062 WFDC9Q8NEX5 89 aa9.34□□□□□ -0.91
RBM39-243ENST00000528062 TEX49A0A1B0GTD5 131 aa9.34□□□□□ -0.91
RBM39-243ENST00000528062 MIAQ16674 131 aa9.34□□□□□ -0.91
RBM39-243ENST00000528062 TMEM61Q8N0U2 210 aa9.34□□□□□ -0.91
RBM39-243ENST00000528062 SPANXA1Q9NS26 97 aa9.34□□□□□ -0.91
RBM39-243ENST00000528062 NACAE9PAV3 2078 aa9.34□□□□□ -0.91
RBM39-243ENST00000528062 C11orf72Q8NBR9 251 aa9.33□□□□□ -0.92
RBM39-243ENST00000528062 ICOSQ9Y6W8 199 aa9.33□□□□□ -0.92
RBM39-243ENST00000528062 TMEM262E9PQX1 116 aa9.33□□□□□ -0.92
RBM39-243ENST00000528062 LINC01600Q96MT4 127 aa9.33□□□□□ -0.92
RBM39-243ENST00000528062 TRBV10-2A0A0K0K1G8 114 aa9.32□□□□□ -0.92
RBM39-243ENST00000528062 ZNF415Q09FC8 603 aa9.32□□□□□ -0.92
RBM39-243ENST00000528062 DAND5Q8N907 189 aa9.32□□□□□ -0.92
RBM39-243ENST00000528062 CDKN2A-AS1Q9UH64 79 aa9.32□□□□□ -0.92
RBM39-243ENST00000528062 ZFAND6Q6FIF0 208 aa9.32□□□□□ -0.92
RBM39-243ENST00000528062 PEMTQ9UBM1 199 aa9.32□□□□□ -0.92
RBM39-243ENST00000528062 RNF183Q96D59 192 aa9.31□□□□□ -0.92
RBM39-243ENST00000528062 IGHV3-53P01767 116 aa9.31□□□□□ -0.92
RBM39-243ENST00000528062 RPL13AP40429 203 aaKnown RBP9.31□□□□□ -0.92
RBM39-243ENST00000528062 PIK3CD-AS1Q5SR53 167 aa9.31□□□□□ -0.92
RBM39-243ENST00000528062 CLEC2BQ92478 149 aa9.31□□□□□ -0.92
RBM39-243ENST00000528062 LINC01587Q99440 93 aa9.31□□□□□ -0.92
RBM39-243ENST00000528062 MAP6D1Q9H9H5 199 aa9.31□□□□□ -0.92
RBM39-243ENST00000528062 NBEAL1Q6ZS30 2694 aa9.3□□□□□ -0.92
RBM39-243ENST00000528062 H7C423 109 aa9.3□□□□□ -0.92
RBM39-243ENST00000528062 MGAM2Q2M2H8 2515 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms