RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 C1orf147Q96MC9 270 aaPredicted RBP5.45□□□□□ -1.54
CTNND1-216ENST00000527467 PTPRSQ13332 1948 aa5.45□□□□□ -1.54
CTNND1-216ENST00000527467 hDV103S1A0JD37 113 aa5.44□□□□□ -1.54
CTNND1-216ENST00000527467 NTM-AS1Q6ZSK4 140 aa5.44□□□□□ -1.54
CTNND1-216ENST00000527467 C5orf56Q8N8D9 126 aa5.44□□□□□ -1.54
CTNND1-216ENST00000527467 DCANP1Q8TF63 244 aa5.44□□□□□ -1.54
CTNND1-216ENST00000527467 AJUBAQ96IF1 538 aa5.44□□□□□ -1.54
CTNND1-216ENST00000527467 I3L2K1 104 aa5.44□□□□□ -1.54
CTNND1-216ENST00000527467 M0R378 163 aa5.44□□□□□ -1.54
CTNND1-216ENST00000527467 SLURP1P55000 103 aa5.44□□□□□ -1.54
CTNND1-216ENST00000527467 PRAC2D3DTV9 90 aa5.44□□□□□ -1.54
CTNND1-216ENST00000527467 NHLRC4P0CG21 123 aaPredicted RBP5.44□□□□□ -1.54
CTNND1-216ENST00000527467 PATE2Q6UY27 113 aa5.44□□□□□ -1.54
CTNND1-216ENST00000527467 HEATR5AQ86XA9 2040 aa5.44□□□□□ -1.54
CTNND1-216ENST00000527467 IGHV7-81A0A0B4J1V7 117 aa5.44□□□□□ -1.54
CTNND1-216ENST00000527467 DEFB136Q30KP8 78 aa5.44□□□□□ -1.54
CTNND1-216ENST00000527467 LINC00322Q6ZN03 302 aaPredicted RBP5.43□□□□□ -1.54
CTNND1-216ENST00000527467 NOTCH4Q99466 2003 aa5.43□□□□□ -1.54
CTNND1-216ENST00000527467 K7EIM0 57 aa5.43□□□□□ -1.54
CTNND1-216ENST00000527467 K7EMT4 169 aa5.43□□□□□ -1.54
CTNND1-216ENST00000527467 MYLKQ15746 1914 aa5.43□□□□□ -1.54
CTNND1-216ENST00000527467 DOCK4Q8N1I0 1966 aa5.43□□□□□ -1.54
CTNND1-216ENST00000527467 A0A087WVE0 104 aa5.43□□□□□ -1.54
CTNND1-216ENST00000527467 SYCNQ0VAF6 134 aa5.43□□□□□ -1.54
CTNND1-216ENST00000527467 ZGRF1Q86YA3 2104 aa5.43□□□□□ -1.54
CTNND1-216ENST00000527467 IGLV11-55A0A075B6I3 123 aa5.43□□□□□ -1.54
CTNND1-216ENST00000527467 A0A1B0GU69 56 aa5.43□□□□□ -1.54
CTNND1-216ENST00000527467 C19orf71A6NCJ1 209 aa5.43□□□□□ -1.54
CTNND1-216ENST00000527467 MAPKAPK5-AS1Q8N8E1 139 aa5.43□□□□□ -1.54
CTNND1-216ENST00000527467 FAM167A-AS1Q96KT0 104 aa5.43□□□□□ -1.54
CTNND1-216ENST00000527467 ANAPC1Q9H1A4 1944 aa5.42□□□□□ -1.54
CTNND1-216ENST00000527467 LINC01547P58512 204 aaPredicted RBP5.42□□□□□ -1.54
CTNND1-216ENST00000527467 Q8N3U1 123 aa5.42□□□□□ -1.54
CTNND1-216ENST00000527467 H0Y9P7 68 aa5.42□□□□□ -1.54
CTNND1-216ENST00000527467 ZFP36P26651 326 aaKnown RBP5.42□□□□□ -1.54
CTNND1-216ENST00000527467 COL4A3Q01955 1670 aa5.42□□□□□ -1.54
CTNND1-216ENST00000527467 FREM3P0C091 2139 aa5.42□□□□□ -1.54
CTNND1-216ENST00000527467 DEFB135Q30KP9 77 aa5.42□□□□□ -1.54
CTNND1-216ENST00000527467 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.42□□□□□ -1.54
CTNND1-216ENST00000527467 IGLV4-3A0A075B6K6 122 aa5.42□□□□□ -1.54
CTNND1-216ENST00000527467 IGKV2-28A0A075B6P5 120 aa5.41□□□□□ -1.54
CTNND1-216ENST00000527467 TRBV10-3A0A0K0K1G6 114 aa5.41□□□□□ -1.54
CTNND1-216ENST00000527467 IGKV2D-28P01615 120 aa5.41□□□□□ -1.54
CTNND1-216ENST00000527467 ZNF295-AS1Q8N0V1 137 aa5.41□□□□□ -1.54
CTNND1-216ENST00000527467 PCDH15Q96QU1 1955 aa5.41□□□□□ -1.54
CTNND1-216ENST00000527467 FRMD6-AS1P0C7T7 363 aa5.41□□□□□ -1.54
CTNND1-216ENST00000527467 SMIM11BQ8TCY0 68 aa5.41□□□□□ -1.54
CTNND1-216ENST00000527467 LINC00467Q9BRT7 94 aa5.41□□□□□ -1.54
CTNND1-216ENST00000527467 PLAC8L1A1L4L8 177 aa5.41□□□□□ -1.54
CTNND1-216ENST00000527467 PKD1L2Q7Z442 2459 aa5.41□□□□□ -1.54
CTNND1-216ENST00000527467 A6NDX4 124 aa5.41□□□□□ -1.54
CTNND1-216ENST00000527467 DEFB4AO15263 64 aa5.4□□□□□ -1.54
CTNND1-216ENST00000527467 IGLV1-44P01699 117 aa5.4□□□□□ -1.54
CTNND1-216ENST00000527467 C10orf25Q5T742 122 aa5.4□□□□□ -1.54
CTNND1-216ENST00000527467 RETNLBQ9BQ08 111 aa5.4□□□□□ -1.54
CTNND1-216ENST00000527467 ROS1P08922 2347 aa5.4□□□□□ -1.54
CTNND1-216ENST00000527467 IGLV9-49A0A0B4J1Y8 123 aa5.4□□□□□ -1.55
CTNND1-216ENST00000527467 TNFRSF13BO14836 293 aaPredicted RBP5.4□□□□□ -1.55
CTNND1-216ENST00000527467 TNCP24821 2201 aa5.39□□□□□ -1.55
CTNND1-216ENST00000527467 A0A0J9YX75 114 aa5.39□□□□□ -1.55
CTNND1-216ENST00000527467 ATP11AUNQ6ZP68 121 aa5.39□□□□□ -1.55
CTNND1-216ENST00000527467 FER1L5A0AVI2 2057 aa5.39□□□□□ -1.55
CTNND1-216ENST00000527467 PTPRDP23468 1912 aa5.39□□□□□ -1.55
CTNND1-216ENST00000527467 MUC7Q8TAX7 377 aa5.39□□□□□ -1.55
CTNND1-216ENST00000527467 TNRC6BQ9UPQ9 1833 aaKnown RBP5.39□□□□□ -1.55
CTNND1-216ENST00000527467 PRM2P04554 102 aa5.39□□□□□ -1.55
CTNND1-216ENST00000527467 DYSFO75923 2080 aa5.38□□□□□ -1.55
CTNND1-216ENST00000527467 IGHV6-1A0A0B4J1U7 121 aa5.38□□□□□ -1.55
CTNND1-216ENST00000527467 C1orf137Q5JT78 98 aa5.38□□□□□ -1.55
CTNND1-216ENST00000527467 GTF3C1Q12789 2109 aa5.38□□□□□ -1.55
CTNND1-216ENST00000527467 PLXNA2O75051 1894 aa5.38□□□□□ -1.55
CTNND1-216ENST00000527467 CCDC140Q96MF4 163 aa5.38□□□□□ -1.55
CTNND1-216ENST00000527467 TMEM131Q92545 1883 aa5.38□□□□□ -1.55
CTNND1-216ENST00000527467 KIAA1549LQ6ZVL6 1849 aa5.38□□□□□ -1.55
CTNND1-216ENST00000527467 PLXND1Q9Y4D7 1925 aa5.38□□□□□ -1.55
CTNND1-216ENST00000527467 C11orf45Q8TAV5 145 aa5.38□□□□□ -1.55
CTNND1-216ENST00000527467 KRTAP21-3Q3LHN1 58 aa5.37□□□□□ -1.55
CTNND1-216ENST00000527467 TRAV10A0A0B4J240 114 aa5.37□□□□□ -1.55
CTNND1-216ENST00000527467 LOC100131303A0A0U1RQF7 123 aa5.37□□□□□ -1.55
CTNND1-216ENST00000527467 C10orf142B7Z368 130 aa5.37□□□□□ -1.55
CTNND1-216ENST00000527467 RPS28P62857 69 aaKnown RBP5.37□□□□□ -1.55
CTNND1-216ENST00000527467 EIF4EBP1Q13541 118 aaPredicted RBP5.37□□□□□ -1.55
CTNND1-216ENST00000527467 PROK2Q9HC23 129 aa5.37□□□□□ -1.55
CTNND1-216ENST00000527467 OBSL1O75147 1896 aa5.37□□□□□ -1.55
CTNND1-216ENST00000527467 CEP192Q8TEP8 1941 aa5.37□□□□□ -1.55
CTNND1-216ENST00000527467 TMEM89A2RUT3 159 aa5.37□□□□□ -1.55
CTNND1-216ENST00000527467 PRLHP81277 87 aa5.37□□□□□ -1.55
CTNND1-216ENST00000527467 PLA2G2EQ9NZK7 142 aa5.37□□□□□ -1.55
CTNND1-216ENST00000527467 RPL28P46779 137 aaKnown RBP5.37□□□□□ -1.55
CTNND1-216ENST00000527467 C2orf91Q6ZV80 131 aa5.37□□□□□ -1.55
CTNND1-216ENST00000527467 IGLV4-69A0A075B6H9 119 aa5.36□□□□□ -1.55
CTNND1-216ENST00000527467 COX17Q14061 63 aa5.36□□□□□ -1.55
CTNND1-216ENST00000527467 Q6ZTI0 123 aa5.36□□□□□ -1.55
CTNND1-216ENST00000527467 C11orf53Q8IXP5 236 aa5.36□□□□□ -1.55
CTNND1-216ENST00000527467 ODF3Q96PU9 254 aa5.36□□□□□ -1.55
CTNND1-216ENST00000527467 C4orf26Q17RF5 130 aa5.36□□□□□ -1.55
CTNND1-216ENST00000527467 MDFIQ99750 246 aa5.36□□□□□ -1.55
CTNND1-216ENST00000527467 ZNF702PQ9H963 129 aa5.36□□□□□ -1.55
CTNND1-216ENST00000527467 TRBV6-8A0A0A6YYG3 113 aa5.36□□□□□ -1.55
CTNND1-216ENST00000527467 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms