RNA–Protein interactions for RNA: ENST00000526874.5

CTR9-203, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene CTR9, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-203ENST00000526874 BDP1A6H8Y1 2624 aa2.38□□□□□ -2.03
CTR9-203ENST00000526874 DOCK11Q5JSL3 2073 aa2.38□□□□□ -2.03
CTR9-203ENST00000526874 SPTBP11277 2137 aa2.38□□□□□ -2.03
CTR9-203ENST00000526874 IGKV3D-7A0A0C4DH55 119 aa2.38□□□□□ -2.03
CTR9-203ENST00000526874 IGKV3OR2-268A0A0C4DH90 116 aa2.38□□□□□ -2.03
CTR9-203ENST00000526874 PLXNC1O60486 1568 aa2.38□□□□□ -2.03
CTR9-203ENST00000526874 EDDM3BP56851 147 aa2.38□□□□□ -2.03
CTR9-203ENST00000526874 ARHGEF5Q12774 1597 aa2.38□□□□□ -2.03
CTR9-203ENST00000526874 NWD1Q149M9 1564 aa2.38□□□□□ -2.03
CTR9-203ENST00000526874 ADIRFQ15847 76 aa2.38□□□□□ -2.03
CTR9-203ENST00000526874 NMSQ5H8A3 153 aa2.38□□□□□ -2.03
CTR9-203ENST00000526874 KRTAP5-5Q701N2 237 aaPredicted RBP2.38□□□□□ -2.03
CTR9-203ENST00000526874 SUPT6HQ7KZ85 1726 aaKnown RBP2.38□□□□□ -2.03
CTR9-203ENST00000526874 FAM223AQ8IWN6 122 aa2.38□□□□□ -2.03
CTR9-203ENST00000526874 NDUFA4L2Q9NRX3 87 aa2.38□□□□□ -2.03
CTR9-203ENST00000526874 UGGT1Q9NYU2 1555 aa2.38□□□□□ -2.03
CTR9-203ENST00000526874 RABAC1Q9UI14 185 aa2.38□□□□□ -2.03
CTR9-203ENST00000526874 INO80Q9ULG1 1556 aaPredicted RBP2.38□□□□□ -2.03
CTR9-203ENST00000526874 SETXQ7Z333 2677 aaKnown RBP2.38□□□□□ -2.03
CTR9-203ENST00000526874 DLEC1Q9Y238 1755 aa2.38□□□□□ -2.03
CTR9-203ENST00000526874 ICE1Q9Y2F5 2266 aa2.38□□□□□ -2.03
CTR9-203ENST00000526874 MED12Q93074 2177 aa2.37□□□□□ -2.03
CTR9-203ENST00000526874 SPAG17Q6Q759 2223 aa2.37□□□□□ -2.03
CTR9-203ENST00000526874 CEP170BQ9Y4F5 1589 aaPredicted RBP2.37□□□□□ -2.03
CTR9-203ENST00000526874 SZT2Q5T011 3432 aa2.37□□□□□ -2.03
CTR9-203ENST00000526874 DLG5Q8TDM6 1919 aa2.37□□□□□ -2.03
CTR9-203ENST00000526874 FLNBO75369 2602 aaKnown RBP2.37□□□□□ -2.03
CTR9-203ENST00000526874 TRBV6-7A0A0A0MS04 114 aa2.37□□□□□ -2.03
CTR9-203ENST00000526874 NBDYA0A0U1RRE5 68 aa2.37□□□□□ -2.03
CTR9-203ENST00000526874 A0A1W2PPM0 123 aa2.37□□□□□ -2.03
CTR9-203ENST00000526874 CCL3L1P16619 93 aa2.37□□□□□ -2.03
CTR9-203ENST00000526874 RPL37AP61513 92 aaKnown RBP2.37□□□□□ -2.03
CTR9-203ENST00000526874 VMO1Q7Z5L0 202 aa2.37□□□□□ -2.03
CTR9-203ENST00000526874 CDC42SE2Q9NRR3 84 aa2.37□□□□□ -2.03
CTR9-203ENST00000526874 PTPN23Q9H3S7 1636 aa2.37□□□□□ -2.03
CTR9-203ENST00000526874 EXPH5Q8NEV8 1989 aa2.37□□□□□ -2.03
CTR9-203ENST00000526874 NRXN1Q9ULB1 1477 aa2.37□□□□□ -2.03
CTR9-203ENST00000526874 ARFGEF1Q9Y6D6 1849 aa2.37□□□□□ -2.03
CTR9-203ENST00000526874 ITSN2Q9NZM3 1697 aa2.37□□□□□ -2.03
CTR9-203ENST00000526874 COL5A3P25940 1745 aaPredicted RBP2.37□□□□□ -2.03
CTR9-203ENST00000526874 CDC42BPAQ5VT25 1732 aa2.37□□□□□ -2.03
CTR9-203ENST00000526874 RNF17Q9BXT8 1623 aaKnown RBP2.36□□□□□ -2.03
CTR9-203ENST00000526874 DEFA5Q01523 94 aa2.36□□□□□ -2.03
CTR9-203ENST00000526874 SSBP1Q04837 148 aaKnown RBP2.36□□□□□ -2.03
CTR9-203ENST00000526874 TET1Q8NFU7 2136 aa2.36□□□□□ -2.03
CTR9-203ENST00000526874 VWDEQ8N2E2 1590 aa2.36□□□□□ -2.03
CTR9-203ENST00000526874 MAST1Q9Y2H9 1570 aa2.36□□□□□ -2.03
CTR9-203ENST00000526874 TTC28Q96AY4 2481 aa2.35□□□□□ -2.03
CTR9-203ENST00000526874 HFM1A2PYH4 1435 aa2.35□□□□□ -2.03
CTR9-203ENST00000526874 FASNP49327 2511 aaKnown RBP2.35□□□□□ -2.03
CTR9-203ENST00000526874 RREB1Q92766 1687 aa2.35□□□□□ -2.03
CTR9-203ENST00000526874 IGKV2-29A2NJV5 120 aaPredicted RBP2.35□□□□□ -2.03
CTR9-203ENST00000526874 HMGN4O00479 90 aa2.35□□□□□ -2.03
CTR9-203ENST00000526874 INE1O15225 51 aa2.35□□□□□ -2.03
CTR9-203ENST00000526874 IGLC2P0DOY2 106 aa2.35□□□□□ -2.03
CTR9-203ENST00000526874 IGLC3P0DOY3 106 aa2.35□□□□□ -2.03
CTR9-203ENST00000526874 EFNA4P52798 201 aa2.35□□□□□ -2.03
CTR9-203ENST00000526874 BVES-AS1Q5T3Y7 98 aa2.35□□□□□ -2.03
CTR9-203ENST00000526874 LINC00322Q6ZN03 302 aaPredicted RBP2.35□□□□□ -2.03
CTR9-203ENST00000526874 COX7B2Q8TF08 81 aa2.35□□□□□ -2.03
CTR9-203ENST00000526874 ZNF625Q96I27 306 aaPredicted RBP2.35□□□□□ -2.03
CTR9-203ENST00000526874 SMCO4Q9NRQ5 59 aa2.35□□□□□ -2.03
CTR9-203ENST00000526874 TMEM14CQ9P0S9 112 aa2.35□□□□□ -2.03
CTR9-203ENST00000526874 EFCAB6Q5THR3 1501 aa2.35□□□□□ -2.03
CTR9-203ENST00000526874 LMTK2Q8IWU2 1503 aa2.35□□□□□ -2.03
CTR9-203ENST00000526874 PLXNA1Q9UIW2 1896 aa2.35□□□□□ -2.03
CTR9-203ENST00000526874 CLTCQ00610 1675 aaKnown RBP2.34□□□□□ -2.03
CTR9-203ENST00000526874 CEP290O15078 2479 aa2.34□□□□□ -2.03
CTR9-203ENST00000526874 NAV2Q8IVL1 2488 aa2.34□□□□□ -2.03
CTR9-203ENST00000526874 UBR1Q8IWV7 1749 aa2.34□□□□□ -2.03
CTR9-203ENST00000526874 USP9XQ93008 2570 aaPredicted RBP2.34□□□□□ -2.03
CTR9-203ENST00000526874 KIF20BQ96Q89 1820 aa2.34□□□□□ -2.03
CTR9-203ENST00000526874 PDCD5O14737 125 aa2.34□□□□□ -2.03
CTR9-203ENST00000526874 PPP1R17O96001 155 aa2.34□□□□□ -2.03
CTR9-203ENST00000526874 IGKV1-17P01599 117 aa2.34□□□□□ -2.03
CTR9-203ENST00000526874 FXYD4P59646 89 aa2.34□□□□□ -2.03
CTR9-203ENST00000526874 FXYD3Q14802 87 aa2.34□□□□□ -2.03
CTR9-203ENST00000526874 DYNLRB1Q9NP97 96 aa2.34□□□□□ -2.03
CTR9-203ENST00000526874 UNC80Q8N2C7 3258 aa2.34□□□□□ -2.03
CTR9-203ENST00000526874 MROH1Q8NDA8 1641 aa2.34□□□□□ -2.04
CTR9-203ENST00000526874 MYO3AQ8NEV4 1616 aa2.34□□□□□ -2.04
CTR9-203ENST00000526874 MYH4Q9Y623 1939 aa2.34□□□□□ -2.04
CTR9-203ENST00000526874 C3P01024 1663 aa2.34□□□□□ -2.04
CTR9-203ENST00000526874 ZDBF2Q9HCK1 2354 aa2.34□□□□□ -2.04
CTR9-203ENST00000526874 RALGAPBQ86X10 1494 aa2.33□□□□□ -2.04
CTR9-203ENST00000526874 SLIT1O75093 1534 aa2.33□□□□□ -2.04
CTR9-203ENST00000526874 UNC13BO14795 1591 aa2.33□□□□□ -2.04
CTR9-203ENST00000526874 MAST4O15021 2626 aa2.33□□□□□ -2.04
CTR9-203ENST00000526874 TMEM14DPA8MWL7 114 aa2.33□□□□□ -2.04
CTR9-203ENST00000526874 ELOF1P60002 83 aaKnown RBP2.33□□□□□ -2.04
CTR9-203ENST00000526874 KLKP1Q107X0 134 aa2.33□□□□□ -2.04
CTR9-203ENST00000526874 PMCHL1Q16048 86 aa2.33□□□□□ -2.04
CTR9-203ENST00000526874 SPATA45Q537H7 98 aa2.33□□□□□ -2.04
CTR9-203ENST00000526874 PI4KAP42356 2102 aa2.33□□□□□ -2.04
CTR9-203ENST00000526874 PHRF1Q9P1Y6 1649 aaKnown RBP2.32□□□□□ -2.04
CTR9-203ENST00000526874 EIF2AK4Q9P2K8 1649 aaKnown RBP2.32□□□□□ -2.04
CTR9-203ENST00000526874 MROH2AA6NES4 1674 aa2.32□□□□□ -2.04
CTR9-203ENST00000526874 PRRC2BQ5JSZ5 2229 aaKnown RBP2.32□□□□□ -2.04
CTR9-203ENST00000526874 A0A087WTM6 91 aa2.32□□□□□ -2.04
CTR9-203ENST00000526874 SPRR5A0A1B0GTR4 108 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms