RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 DPH3P1Q9H4G8 78 aa3.83□□□□□ -1.8
CCDC90B-204ENST00000525504 IGLV4-60A0A075B6I1 120 aa3.82□□□□□ -1.8
CCDC90B-204ENST00000525504 TMEM250H0YL14 139 aa3.82□□□□□ -1.8
CCDC90B-204ENST00000525504 CRPP02741 224 aa3.82□□□□□ -1.8
CCDC90B-204ENST00000525504 NKX2-5P52952 324 aaPredicted RBP3.82□□□□□ -1.8
CCDC90B-204ENST00000525504 CNBPP62633 177 aaKnown RBP3.82□□□□□ -1.8
CCDC90B-204ENST00000525504 REG3AQ06141 175 aa3.82□□□□□ -1.8
CCDC90B-204ENST00000525504 CIRBPQ14011 172 aaKnown RBP3.82□□□□□ -1.8
CCDC90B-204ENST00000525504 FAM231DQ6ZW35 169 aa3.82□□□□□ -1.8
CCDC90B-204ENST00000525504 GATD1Q8NB37 220 aa3.82□□□□□ -1.8
CCDC90B-204ENST00000525504 TMEM243Q9BU79 118 aa3.82□□□□□ -1.8
CCDC90B-204ENST00000525504 GFRA4Q9GZZ7 299 aa3.82□□□□□ -1.8
CCDC90B-204ENST00000525504 RNASE7Q9H1E1 156 aaKnown RBP3.82□□□□□ -1.8
CCDC90B-204ENST00000525504 RPP21Q9H633 154 aaKnown RBP3.82□□□□□ -1.8
CCDC90B-204ENST00000525504 PKHD1L1Q86WI1 4243 aa3.81□□□□□ -1.8
CCDC90B-204ENST00000525504 NCR2O95944 276 aa3.81□□□□□ -1.8
CCDC90B-204ENST00000525504 S100A6P06703 90 aa3.81□□□□□ -1.8
CCDC90B-204ENST00000525504 MGPP08493 103 aa3.81□□□□□ -1.8
CCDC90B-204ENST00000525504 TWIST1Q15672 202 aa3.81□□□□□ -1.8
CCDC90B-204ENST00000525504 TEX261Q6UWH6 196 aa3.81□□□□□ -1.8
CCDC90B-204ENST00000525504 TRBV6-5A0A0K0K1A5 114 aa3.8□□□□□ -1.8
CCDC90B-204ENST00000525504 FAM231BA6NCW3 169 aa3.8□□□□□ -1.8
CCDC90B-204ENST00000525504 A8MWL6 223 aa3.8□□□□□ -1.8
CCDC90B-204ENST00000525504 H7C423 109 aa3.8□□□□□ -1.8
CCDC90B-204ENST00000525504 OXTP01178 125 aa3.8□□□□□ -1.8
CCDC90B-204ENST00000525504 COTL1Q14019 142 aa3.8□□□□□ -1.8
CCDC90B-204ENST00000525504 IGLV10-54A0A075B6I4 117 aa3.79□□□□□ -1.8
CCDC90B-204ENST00000525504 PANO1I0J062 215 aa3.79□□□□□ -1.8
CCDC90B-204ENST00000525504 HLA-DQA1P01909 254 aa3.79□□□□□ -1.8
CCDC90B-204ENST00000525504 ESDP10768 282 aa3.79□□□□□ -1.8
CCDC90B-204ENST00000525504 AMTP48728 403 aa3.79□□□□□ -1.8
CCDC90B-204ENST00000525504 LBHQ53QV2 105 aaPredicted RBP3.79□□□□□ -1.8
CCDC90B-204ENST00000525504 CLPSL2Q6UWE3 100 aa3.79□□□□□ -1.8
CCDC90B-204ENST00000525504 ALKAL2Q6UX46 152 aa3.79□□□□□ -1.8
CCDC90B-204ENST00000525504 AKAP14Q86UN6 197 aa3.79□□□□□ -1.8
CCDC90B-204ENST00000525504 UBR4Q5T4S7 5183 aa3.78□□□□□ -1.8
CCDC90B-204ENST00000525504 TRAV26-2A0A0B4J265 109 aa3.78□□□□□ -1.8
CCDC90B-204ENST00000525504 hDV102S1A0JD36 115 aa3.78□□□□□ -1.8
CCDC90B-204ENST00000525504 SDHAF1A6NFY7 115 aa3.78□□□□□ -1.8
CCDC90B-204ENST00000525504 HSBP1L1C9JCN9 74 aa3.78□□□□□ -1.8
CCDC90B-204ENST00000525504 I3L3M4 83 aa3.78□□□□□ -1.8
CCDC90B-204ENST00000525504 GATCO43716 136 aaKnown RBP3.78□□□□□ -1.8
CCDC90B-204ENST00000525504 GAS8-AS1O95177 125 aa3.78□□□□□ -1.8
CCDC90B-204ENST00000525504 SRP19P09132 144 aaKnown RBP3.78□□□□□ -1.8
CCDC90B-204ENST00000525504 VPREB1P12018 145 aa3.78□□□□□ -1.8
CCDC90B-204ENST00000525504 POLR2KP53803 58 aaKnown RBP3.78□□□□□ -1.8
CCDC90B-204ENST00000525504 SMIM15Q7Z3B0 74 aa3.78□□□□□ -1.8
CCDC90B-204ENST00000525504 LINC01551Q86U37 167 aa3.78□□□□□ -1.8
CCDC90B-204ENST00000525504 TSKUQ8WUA8 353 aa3.78□□□□□ -1.8
CCDC90B-204ENST00000525504 RPL39LQ96EH5 51 aaKnown RBP3.78□□□□□ -1.8
CCDC90B-204ENST00000525504 RNF185Q96GF1 192 aa3.78□□□□□ -1.8
CCDC90B-204ENST00000525504 TMEM191AQ9H0A3 160 aa3.78□□□□□ -1.8
CCDC90B-204ENST00000525504 OSTCQ9NRP0 149 aa3.78□□□□□ -1.8
CCDC90B-204ENST00000525504 IGHV3-64A0A075B6Q5 118 aa3.77□□□□□ -1.81
CCDC90B-204ENST00000525504 TRBV27A0A0K0K1C4 114 aa3.77□□□□□ -1.81
CCDC90B-204ENST00000525504 A0A1B0GUT8 65 aa3.77□□□□□ -1.81
CCDC90B-204ENST00000525504 UBE2L6O14933 153 aa3.77□□□□□ -1.81
CCDC90B-204ENST00000525504 FGF6P10767 208 aa3.77□□□□□ -1.81
CCDC90B-204ENST00000525504 ZNF25P17030 456 aaPredicted RBP3.77□□□□□ -1.81
CCDC90B-204ENST00000525504 RAB4AP20338 218 aa3.77□□□□□ -1.81
CCDC90B-204ENST00000525504 MRPL52Q86TS9 123 aaKnown RBP3.77□□□□□ -1.81
CCDC90B-204ENST00000525504 C15orf56Q8N910 161 aa3.77□□□□□ -1.81
CCDC90B-204ENST00000525504 PLAC8Q9NZF1 115 aa3.77□□□□□ -1.81
CCDC90B-204ENST00000525504 TNXBP22105 4242 aa3.76□□□□□ -1.81
CCDC90B-204ENST00000525504 A0A087WYN8 130 aa3.76□□□□□ -1.81
CCDC90B-204ENST00000525504 GVQW2A0A096LPI5 108 aaPredicted RBP3.76□□□□□ -1.81
CCDC90B-204ENST00000525504 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.76□□□□□ -1.81
CCDC90B-204ENST00000525504 ZNF727A8MUV8 499 aa3.76□□□□□ -1.81
CCDC90B-204ENST00000525504 HIGD1CA8MV81 97 aa3.76□□□□□ -1.81
CCDC90B-204ENST00000525504 C9JQL5 133 aa3.76□□□□□ -1.81
CCDC90B-204ENST00000525504 VCYO14598 125 aa3.76□□□□□ -1.81
CCDC90B-204ENST00000525504 TSHBP01222 138 aa3.76□□□□□ -1.81
CCDC90B-204ENST00000525504 APCSP02743 223 aa3.76□□□□□ -1.81
CCDC90B-204ENST00000525504 RPS10P46783 165 aaKnown RBP3.76□□□□□ -1.81
CCDC90B-204ENST00000525504 HNRNPA3P51991 378 aaKnown RBP3.76□□□□□ -1.81
CCDC90B-204ENST00000525504 RPL37AP61513 92 aaKnown RBP3.76□□□□□ -1.81
CCDC90B-204ENST00000525504 FAM74A3Q4VXF1 159 aa3.76□□□□□ -1.81
CCDC90B-204ENST00000525504 OR5A1Q8NGJ0 315 aa3.76□□□□□ -1.81
CCDC90B-204ENST00000525504 SPACA4Q8TDM5 124 aa3.76□□□□□ -1.81
CCDC90B-204ENST00000525504 CHCHD10Q8WYQ3 142 aaPredicted RBP3.76□□□□□ -1.81
CCDC90B-204ENST00000525504 MRAP2Q96G30 205 aa3.76□□□□□ -1.81
CCDC90B-204ENST00000525504 SMIM7Q9BQ49 75 aa3.76□□□□□ -1.81
CCDC90B-204ENST00000525504 ST20Q9HBF5 79 aa3.76□□□□□ -1.81
CCDC90B-204ENST00000525504 CDC42SE2Q9NRR3 84 aa3.76□□□□□ -1.81
CCDC90B-204ENST00000525504 CSDC2Q9Y534 153 aaKnown RBP3.76□□□□□ -1.81
CCDC90B-204ENST00000525504 V9GYV3 84 aa3.76□□□□□ -1.81
CCDC90B-204ENST00000525504 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.75□□□□□ -1.81
CCDC90B-204ENST00000525504 LINC00959A0A1B0GUT2 108 aa3.75□□□□□ -1.81
CCDC90B-204ENST00000525504 IGKV2-29A2NJV5 120 aaPredicted RBP3.75□□□□□ -1.81
CCDC90B-204ENST00000525504 PPP1R17O96001 155 aa3.75□□□□□ -1.81
CCDC90B-204ENST00000525504 MT1HL1P0DM35 61 aa3.75□□□□□ -1.81
CCDC90B-204ENST00000525504 PMCHP20382 165 aa3.75□□□□□ -1.81
CCDC90B-204ENST00000525504 RIGQ13278 110 aa3.75□□□□□ -1.81
CCDC90B-204ENST00000525504 TMEM241Q24JQ0 296 aa3.75□□□□□ -1.81
CCDC90B-204ENST00000525504 AMMECR1LQ6DCA0 310 aa3.75□□□□□ -1.81
CCDC90B-204ENST00000525504 RNASEKQ6P5S7 137 aaKnown RBP3.75□□□□□ -1.81
CCDC90B-204ENST00000525504 Q6ZRU5 148 aa3.75□□□□□ -1.81
CCDC90B-204ENST00000525504 NRACQ8N912 160 aa3.75□□□□□ -1.81
CCDC90B-204ENST00000525504 NUP35Q8NFH5 326 aa3.75□□□□□ -1.81
CCDC90B-204ENST00000525504 EIF5A2Q9GZV4 153 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms