RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 M0R381 172 aa3.75□□□□□ -1.81
CD44-218ENST00000525469 BUB3O43684 328 aa3.75□□□□□ -1.81
CD44-218ENST00000525469 IGHG2P01859 326 aa3.75□□□□□ -1.81
CD44-218ENST00000525469 RNASE2P10153 161 aaKnown RBP3.75□□□□□ -1.81
CD44-218ENST00000525469 GP9P14770 177 aa3.75□□□□□ -1.81
CD44-218ENST00000525469 LGALS3P17931 250 aaKnown RBP3.75□□□□□ -1.81
CD44-218ENST00000525469 BRWD1-AS2P59051 145 aa3.75□□□□□ -1.81
CD44-218ENST00000525469 VMA21Q3ZAQ7 101 aa3.75□□□□□ -1.81
CD44-218ENST00000525469 SPINK9Q5DT21 86 aa3.75□□□□□ -1.81
CD44-218ENST00000525469 C1orf158Q8N1D5 194 aa3.75□□□□□ -1.81
CD44-218ENST00000525469 TOMM6Q96B49 74 aa3.75□□□□□ -1.81
CD44-218ENST00000525469 PRR25Q96S07 402 aa3.75□□□□□ -1.81
CD44-218ENST00000525469 ZNRD1Q9P1U0 126 aa3.75□□□□□ -1.81
CD44-218ENST00000525469 PYGO1Q9Y3Y4 419 aa3.75□□□□□ -1.81
CD44-218ENST00000525469 SORL1Q92673 2214 aa3.74□□□□□ -1.81
CD44-218ENST00000525469 A0A0J9YXY3 114 aa3.74□□□□□ -1.81
CD44-218ENST00000525469 A0A0U1RRA0 63 aa3.74□□□□□ -1.81
CD44-218ENST00000525469 TEX49A0A1B0GTD5 131 aa3.74□□□□□ -1.81
CD44-218ENST00000525469 TMEM178BH3BS89 294 aa3.74□□□□□ -1.81
CD44-218ENST00000525469 M0R3E3 92 aa3.74□□□□□ -1.81
CD44-218ENST00000525469 LST1O00453 97 aa3.74□□□□□ -1.81
CD44-218ENST00000525469 MRPS12O15235 138 aaKnown RBP3.74□□□□□ -1.81
CD44-218ENST00000525469 NDUFA3O95167 84 aa3.74□□□□□ -1.81
CD44-218ENST00000525469 PATE4P0C8F1 98 aa3.74□□□□□ -1.81
CD44-218ENST00000525469 SYNJ2BPP57105 145 aa3.74□□□□□ -1.81
CD44-218ENST00000525469 PVRIGQ6DKI7 326 aa3.74□□□□□ -1.81
CD44-218ENST00000525469 Q6JHZ5 121 aa3.74□□□□□ -1.81
CD44-218ENST00000525469 MAPKAPK5-AS1Q8N8E1 139 aa3.74□□□□□ -1.81
CD44-218ENST00000525469 NEXN-AS1Q8NBZ9 246 aa3.74□□□□□ -1.81
CD44-218ENST00000525469 NDUFA4L2Q9NRX3 87 aa3.74□□□□□ -1.81
CD44-218ENST00000525469 RNF7Q9UBF6 113 aa3.74□□□□□ -1.81
CD44-218ENST00000525469 DYNC2H1Q8NCM8 4307 aaKnown RBP3.73□□□□□ -1.81
CD44-218ENST00000525469 IGHV4-4A0A075B6R2 117 aa3.73□□□□□ -1.81
CD44-218ENST00000525469 IGKV1OR2-108A0A075B7D4 117 aa3.73□□□□□ -1.81
CD44-218ENST00000525469 TRBV10-3A0A0K0K1G6 114 aa3.73□□□□□ -1.81
CD44-218ENST00000525469 FAM236DA0A1B0GTK5 79 aa3.73□□□□□ -1.81
CD44-218ENST00000525469 H3BUX3 64 aa3.73□□□□□ -1.81
CD44-218ENST00000525469 VCYO14598 125 aa3.73□□□□□ -1.81
CD44-218ENST00000525469 NBR2O15453 112 aa3.73□□□□□ -1.81
CD44-218ENST00000525469 FSTL3O95633 263 aa3.73□□□□□ -1.81
CD44-218ENST00000525469 FAM236CP0DP71 79 aa3.73□□□□□ -1.81
CD44-218ENST00000525469 LY6EQ16553 131 aa3.73□□□□□ -1.81
CD44-218ENST00000525469 MORN5Q5VZ52 161 aa3.73□□□□□ -1.81
CD44-218ENST00000525469 Q5XG85 94 aa3.73□□□□□ -1.81
CD44-218ENST00000525469 HRCT1Q6UXD1 115 aa3.73□□□□□ -1.81
CD44-218ENST00000525469 VKORC1L1Q8N0U8 176 aa3.73□□□□□ -1.81
CD44-218ENST00000525469 FGFBP3Q8TAT2 258 aa3.73□□□□□ -1.81
CD44-218ENST00000525469 TMEM167AQ8TBQ9 72 aa3.73□□□□□ -1.81
CD44-218ENST00000525469 TMEM263Q8WUH6 116 aaKnown RBP3.73□□□□□ -1.81
CD44-218ENST00000525469 C2orf48Q96LS8 159 aa3.73□□□□□ -1.81
CD44-218ENST00000525469 TIMM17AQ99595 171 aa3.73□□□□□ -1.81
CD44-218ENST00000525469 SMIM2Q9BVW6 85 aa3.73□□□□□ -1.81
CD44-218ENST00000525469 DPH3P1Q9H4G8 78 aa3.73□□□□□ -1.81
CD44-218ENST00000525469 DNAH9Q9NYC9 4486 aa3.73□□□□□ -1.81
CD44-218ENST00000525469 RYR1P21817 5038 aa3.73□□□□□ -1.81
CD44-218ENST00000525469 IGLV2-18A0A075B6J9 118 aa3.72□□□□□ -1.81
CD44-218ENST00000525469 TRBV19A0A075B6N1 114 aa3.72□□□□□ -1.81
CD44-218ENST00000525469 IQCF6A8MYZ5 107 aa3.72□□□□□ -1.81
CD44-218ENST00000525469 EPM2AB3EWF7 344 aa3.72□□□□□ -1.81
CD44-218ENST00000525469 H7C423 109 aa3.72□□□□□ -1.81
CD44-218ENST00000525469 PRYO14603 147 aa3.72□□□□□ -1.81
CD44-218ENST00000525469 LEPROTO15243 131 aa3.72□□□□□ -1.81
CD44-218ENST00000525469 TIMM17BO60830 172 aa3.72□□□□□ -1.81
CD44-218ENST00000525469 IGLV2-11P01706 119 aa3.72□□□□□ -1.81
CD44-218ENST00000525469 CD164Q04900 197 aa3.72□□□□□ -1.81
CD44-218ENST00000525469 ASPHD1Q5U4P2 390 aa3.72□□□□□ -1.81
CD44-218ENST00000525469 PATE2Q6UY27 113 aa3.72□□□□□ -1.81
CD44-218ENST00000525469 LINC00322Q6ZN03 302 aaPredicted RBP3.72□□□□□ -1.81
CD44-218ENST00000525469 VMO1Q7Z5L0 202 aa3.72□□□□□ -1.81
CD44-218ENST00000525469 FAM216BQ8N7L0 139 aa3.72□□□□□ -1.81
CD44-218ENST00000525469 KLF14Q8TD94 323 aaPredicted RBP3.72□□□□□ -1.81
CD44-218ENST00000525469 ICOSQ9Y6W8 199 aa3.72□□□□□ -1.81
CD44-218ENST00000525469 SACSQ9NZJ4 4579 aa3.71□□□□□ -1.82
CD44-218ENST00000525469 A0A0A0MQY5 61 aa3.71□□□□□ -1.82
CD44-218ENST00000525469 TRAV3A0A0B4J244 114 aa3.71□□□□□ -1.82
CD44-218ENST00000525469 LY6LH3BQJ8 138 aa3.71□□□□□ -1.82
CD44-218ENST00000525469 SH2D1AO60880 128 aa3.71□□□□□ -1.82
CD44-218ENST00000525469 DNAL4O96015 105 aa3.71□□□□□ -1.82
CD44-218ENST00000525469 RBMY1A1P0DJD3 496 aaKnown RBP3.71□□□□□ -1.82
CD44-218ENST00000525469 RBMY1CP0DJD4 496 aa3.71□□□□□ -1.82
CD44-218ENST00000525469 CD24P25063 80 aa3.71□□□□□ -1.82
CD44-218ENST00000525469 ERCC8Q13216 396 aa3.71□□□□□ -1.82
CD44-218ENST00000525469 CIRBPQ14011 172 aaKnown RBP3.71□□□□□ -1.82
CD44-218ENST00000525469 RBMY1FQ15415 496 aaKnown RBP3.71□□□□□ -1.82
CD44-218ENST00000525469 C4orf26Q17RF5 130 aa3.71□□□□□ -1.82
CD44-218ENST00000525469 ZNF826PQ6ZT77 177 aa3.71□□□□□ -1.82
CD44-218ENST00000525469 RPL36ALQ969Q0 106 aaKnown RBP3.71□□□□□ -1.82
CD44-218ENST00000525469 TIMM21Q9BVV7 248 aa3.71□□□□□ -1.82
CD44-218ENST00000525469 LINC00574Q9H8X3 128 aa3.71□□□□□ -1.82
CD44-218ENST00000525469 LENEPQ9Y5L5 61 aa3.71□□□□□ -1.82
CD44-218ENST00000525469 SMAD5-AS1Q9Y6J3 95 aa3.71□□□□□ -1.82
CD44-218ENST00000525469 TRBV7-1A0A0A6YYK4 115 aa3.7□□□□□ -1.82
CD44-218ENST00000525469 A0A0U1RQV1 116 aa3.7□□□□□ -1.82
CD44-218ENST00000525469 TMEM223A0PJW6 202 aa3.7□□□□□ -1.82
CD44-218ENST00000525469 LYRM9A8MSI8 78 aa3.7□□□□□ -1.82
CD44-218ENST00000525469 LHBP01229 141 aa3.7□□□□□ -1.82
CD44-218ENST00000525469 RPL35AP18077 110 aaKnown RBP3.7□□□□□ -1.82
CD44-218ENST00000525469 CFHR3Q02985 330 aa3.7□□□□□ -1.82
CD44-218ENST00000525469 LYPD2Q6UXB3 125 aa3.7□□□□□ -1.82
CD44-218ENST00000525469 STHQ8IWL8 128 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms