RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 IGHV3-30-5P0DP03 117 aa2.66□□□□□ -1.98
USP47-204ENST00000525078 KRTAP12-2P59991 146 aa2.66□□□□□ -1.98
USP47-204ENST00000525078 SPRNQ5BIV9 151 aa2.66□□□□□ -1.98
USP47-204ENST00000525078 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
USP47-204ENST00000525078 MYOZ3Q8TDC0 251 aa2.66□□□□□ -1.98
USP47-204ENST00000525078 FN1P02751 2386 aaKnown RBP2.66□□□□□ -1.98
USP47-204ENST00000525078 COL4A4P53420 1690 aaPredicted RBP2.66□□□□□ -1.98
USP47-204ENST00000525078 ALPK2Q86TB3 2170 aa2.66□□□□□ -1.98
USP47-204ENST00000525078 DOCK10Q96BY6 2186 aa2.66□□□□□ -1.98
USP47-204ENST00000525078 IGKV3-7A0A075B6H7 116 aa2.65□□□□□ -1.99
USP47-204ENST00000525078 HCG22E2RYF7 251 aa2.65□□□□□ -1.99
USP47-204ENST00000525078 GNGT2O14610 69 aa2.65□□□□□ -1.99
USP47-204ENST00000525078 IGLV3-1P01715 115 aa2.65□□□□□ -1.99
USP47-204ENST00000525078 MT-ATP8P03928 68 aa2.65□□□□□ -1.99
USP47-204ENST00000525078 PDE6GP18545 87 aa2.65□□□□□ -1.99
USP47-204ENST00000525078 CYP2G1PQ6ZSU1 146 aa2.65□□□□□ -1.99
USP47-204ENST00000525078 MED9Q9NWA0 146 aa2.65□□□□□ -1.99
USP47-204ENST00000525078 SCP2D1Q9UJQ7 156 aa2.65□□□□□ -1.99
USP47-204ENST00000525078 ANKRD36A6QL64 1941 aa2.65□□□□□ -1.99
USP47-204ENST00000525078 UNC13CQ8NB66 2214 aa2.65□□□□□ -1.99
USP47-204ENST00000525078 FXYD1O00168 92 aa2.64□□□□□ -1.99
USP47-204ENST00000525078 LINC00322Q6ZN03 302 aaPredicted RBP2.64□□□□□ -1.99
USP47-204ENST00000525078 PDCD11Q14690 1871 aaKnown RBP2.64□□□□□ -1.99
USP47-204ENST00000525078 GBF1Q92538 1859 aa2.64□□□□□ -1.99
USP47-204ENST00000525078 PLXNA1Q9UIW2 1896 aa2.64□□□□□ -1.99
USP47-204ENST00000525078 HIGD1CA8MV81 97 aa2.63□□□□□ -1.99
USP47-204ENST00000525078 INE1O15225 51 aa2.63□□□□□ -1.99
USP47-204ENST00000525078 CCL8P80075 99 aa2.63□□□□□ -1.99
USP47-204ENST00000525078 SPATA45Q537H7 98 aa2.63□□□□□ -1.99
USP47-204ENST00000525078 LINC00312Q9Y6C7 94 aa2.63□□□□□ -1.99
USP47-204ENST00000525078 PTPRDP23468 1912 aa2.63□□□□□ -1.99
USP47-204ENST00000525078 MUC22E2RYF6 1773 aaPredicted RBP2.63□□□□□ -1.99
USP47-204ENST00000525078 CHD3Q12873 2000 aaKnown RBP2.63□□□□□ -1.99
USP47-204ENST00000525078 TNRC6AQ8NDV7 1962 aaKnown RBP2.62□□□□□ -1.99
USP47-204ENST00000525078 KRTDAPP60985 99 aa2.62□□□□□ -1.99
USP47-204ENST00000525078 IL9P15248 144 aa2.61□□□□□ -1.99
USP47-204ENST00000525078 RPL37AP61513 92 aaKnown RBP2.61□□□□□ -1.99
USP47-204ENST00000525078 PMCHL2Q9BQD1 86 aa2.61□□□□□ -1.99
USP47-204ENST00000525078 CYP4F30PQ9H0H9 118 aa2.61□□□□□ -1.99
USP47-204ENST00000525078 V9GYH0 126 aa2.61□□□□□ -1.99
USP47-204ENST00000525078 PATJQ8NI35 1801 aa2.61□□□□□ -1.99
USP47-204ENST00000525078 UBR3Q6ZT12 1888 aa2.6□□□□□ -1.99
USP47-204ENST00000525078 ICE1Q9Y2F5 2266 aa2.6□□□□□ -1.99
USP47-204ENST00000525078 NAP1L6A6NFF2 107 aa2.6□□□□□ -1.99
USP47-204ENST00000525078 M0R2N4 97 aa2.6□□□□□ -1.99
USP47-204ENST00000525078 SIX6O95475 246 aa2.6□□□□□ -1.99
USP47-204ENST00000525078 NCBP2-AS2Q69YL0 99 aa2.6□□□□□ -1.99
USP47-204ENST00000525078 ZNF818PQ6ZRF7 136 aa2.6□□□□□ -1.99
USP47-204ENST00000525078 ZNF625Q96I27 306 aaPredicted RBP2.6□□□□□ -1.99
USP47-204ENST00000525078 KRTAP4-3Q9BYR4 195 aa2.6□□□□□ -1.99
USP47-204ENST00000525078 LINC00474Q9P2X8 69 aa2.6□□□□□ -1.99
USP47-204ENST00000525078 CR1P17927 2039 aa2.59□□□□□ -1.99
USP47-204ENST00000525078 PHIPQ8WWQ0 1821 aa2.59□□□□□ -1.99
USP47-204ENST00000525078 HCRTO43612 131 aa2.59□□□□□ -1.99
USP47-204ENST00000525078 Q5BKY6 102 aa2.59□□□□□ -1.99
USP47-204ENST00000525078 C10orf128Q5T292 105 aa2.59□□□□□ -1.99
USP47-204ENST00000525078 PRO1933Q9H354 126 aa2.59□□□□□ -1.99
USP47-204ENST00000525078 TRBV6-7A0A0A0MS04 114 aa2.58□□□□□ -2
USP47-204ENST00000525078 TEX49A0A1B0GTD5 131 aa2.58□□□□□ -2
USP47-204ENST00000525078 LOC101927531A0A1B0GV80 90 aa2.58□□□□□ -2
USP47-204ENST00000525078 hADV29S1A0JD25 119 aa2.58□□□□□ -2
USP47-204ENST00000525078 IGLC1P0CG04 106 aa2.58□□□□□ -2
USP47-204ENST00000525078 UBE2D1P51668 147 aa2.58□□□□□ -2
USP47-204ENST00000525078 GDF5OSQ5U4N7 250 aa2.58□□□□□ -2
USP47-204ENST00000525078 MYO18AQ92614 2054 aaKnown RBP2.57□□□□□ -2
USP47-204ENST00000525078 TNS1Q9HBL0 1735 aaKnown RBP2.57□□□□□ -2
USP47-204ENST00000525078 LOC110117498A0A087WWA1 95 aa2.57□□□□□ -2
USP47-204ENST00000525078 CRYM-AS1A6NIL9 109 aa2.57□□□□□ -2
USP47-204ENST00000525078 Q0VG73 95 aa2.57□□□□□ -2
USP47-204ENST00000525078 KRTAP13-3Q3SY46 172 aa2.57□□□□□ -2
USP47-204ENST00000525078 TSLPQ969D9 159 aa2.57□□□□□ -2
USP47-204ENST00000525078 AMELYQ99218 206 aa2.57□□□□□ -2
USP47-204ENST00000525078 PLXNB2O15031 1838 aa2.56□□□□□ -2
USP47-204ENST00000525078 TRBV7-1A0A0A6YYK4 115 aa2.56□□□□□ -2
USP47-204ENST00000525078 SNRPGP62308 76 aaKnown RBP2.56□□□□□ -2
USP47-204ENST00000525078 SEC11AP67812 179 aa2.56□□□□□ -2
USP47-204ENST00000525078 DEFB103AP81534 67 aa2.56□□□□□ -2
USP47-204ENST00000525078 C20orf197Q8N268 126 aa2.56□□□□□ -2
USP47-204ENST00000525078 PCNX2A6NKB5 2137 aa2.56□□□□□ -2
USP47-204ENST00000525078 LOC285095A0A1B0GVY8 99 aa2.55□□□□□ -2
USP47-204ENST00000525078 FXYD4P59646 89 aa2.55□□□□□ -2
USP47-204ENST00000525078 KRTAP10-8P60410 259 aa2.55□□□□□ -2
USP47-204ENST00000525078 SSBP1Q04837 148 aaKnown RBP2.55□□□□□ -2
USP47-204ENST00000525078 ZGRF1Q86YA3 2104 aa2.55□□□□□ -2
USP47-204ENST00000525078 FAM213BQ8TBF2 198 aa2.55□□□□□ -2
USP47-204ENST00000525078 PAPPA2Q9BXP8 1791 aa2.54□□□□□ -2
USP47-204ENST00000525078 ATOX1O00244 68 aa2.54□□□□□ -2
USP47-204ENST00000525078 NMBP08949 121 aa2.54□□□□□ -2
USP47-204ENST00000525078 ASIPP42127 132 aa2.54□□□□□ -2
USP47-204ENST00000525078 MANBALQ9NQG1 85 aa2.54□□□□□ -2
USP47-204ENST00000525078 IGKV2-29A2NJV5 120 aaPredicted RBP2.53□□□□□ -2
USP47-204ENST00000525078 SNRPGP15A8MWD9 76 aa2.53□□□□□ -2
USP47-204ENST00000525078 FAUP35544 74 aaKnown RBP2.53□□□□□ -2
USP47-204ENST00000525078 SMIM11AP58511 58 aa2.53□□□□□ -2
USP47-204ENST00000525078 KRTAP10-1P60331 282 aa2.53□□□□□ -2
USP47-204ENST00000525078 KRTAP13-4Q3LI77 160 aa2.53□□□□□ -2
USP47-204ENST00000525078 PYY3Q5JQD4 70 aa2.53□□□□□ -2
USP47-204ENST00000525078 FAM74A4Q5TZK3 123 aa2.53□□□□□ -2
USP47-204ENST00000525078 PPP1R1CQ8WVI7 109 aa2.53□□□□□ -2
USP47-204ENST00000525078 NPVFQ9HCQ7 196 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms