RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 DEFB104AQ8WTQ1 72 aa11.8□□□□□ -0.52
PACSIN3-202ENST00000524509 YPEL4Q96NS1 127 aa11.8□□□□□ -0.52
PACSIN3-202ENST00000524509 ALKBH7Q9BT30 221 aaPredicted RBP11.8□□□□□ -0.52
PACSIN3-202ENST00000524509 TIMM21Q9BVV7 248 aa11.8□□□□□ -0.52
PACSIN3-202ENST00000524509 C1orf43Q9BWL3 253 aa11.8□□□□□ -0.52
PACSIN3-202ENST00000524509 PRR34Q9NV39 138 aa11.8□□□□□ -0.52
PACSIN3-202ENST00000524509 S100A1P23297 94 aa11.79□□□□□ -0.52
PACSIN3-202ENST00000524509 CBLN2Q8IUK8 224 aa11.79□□□□□ -0.52
PACSIN3-202ENST00000524509 LINC00269Q8N2A0 174 aa11.79□□□□□ -0.52
PACSIN3-202ENST00000524509 Q8N3U1 123 aa11.79□□□□□ -0.52
PACSIN3-202ENST00000524509 C20orf203Q8NBC4 194 aa11.79□□□□□ -0.52
PACSIN3-202ENST00000524509 CDK2AP2O75956 126 aa11.78□□□□□ -0.52
PACSIN3-202ENST00000524509 REG3AQ06141 175 aa11.78□□□□□ -0.52
PACSIN3-202ENST00000524509 Q6ZRN7 208 aaPredicted RBP11.78□□□□□ -0.52
PACSIN3-202ENST00000524509 SPANXA1Q9NS26 97 aa11.78□□□□□ -0.52
PACSIN3-202ENST00000524509 IGKV2D-24A0A075B6R9 120 aa11.77□□□□□ -0.53
PACSIN3-202ENST00000524509 RAB5BP61020 215 aa11.77□□□□□ -0.53
PACSIN3-202ENST00000524509 IGLV4-60A0A075B6I1 120 aa11.76□□□□□ -0.53
PACSIN3-202ENST00000524509 CCL25O15444 150 aa11.76□□□□□ -0.53
PACSIN3-202ENST00000524509 ENHOQ6UWT2 76 aa11.76□□□□□ -0.53
PACSIN3-202ENST00000524509 CYSLTR1Q9Y271 337 aa11.76□□□□□ -0.53
PACSIN3-202ENST00000524509 HERC1Q15751 4861 aa11.75□□□□□ -0.53
PACSIN3-202ENST00000524509 IFI27P40305 119 aaPredicted RBP11.75□□□□□ -0.53
PACSIN3-202ENST00000524509 FA2HQ7L5A8 372 aa11.75□□□□□ -0.53
PACSIN3-202ENST00000524509 ZNF664Q8N3J9 261 aa11.75□□□□□ -0.53
PACSIN3-202ENST00000524509 MAPKAPK5-AS1Q8N8E1 139 aa11.75□□□□□ -0.53
PACSIN3-202ENST00000524509 NPSP0C0P6 89 aa11.74□□□□□ -0.53
PACSIN3-202ENST00000524509 CDC42SE2Q9NRR3 84 aa11.74□□□□□ -0.53
PACSIN3-202ENST00000524509 UBE2D4Q9Y2X8 147 aa11.74□□□□□ -0.53
PACSIN3-202ENST00000524509 PYGO1Q9Y3Y4 419 aa11.74□□□□□ -0.53
PACSIN3-202ENST00000524509 PAPPA-AS1Q5QFB9 102 aa11.73□□□□□ -0.53
PACSIN3-202ENST00000524509 MRPS36P82909 103 aaKnown RBP11.72□□□□□ -0.53
PACSIN3-202ENST00000524509 TNP2Q05952 138 aa11.72□□□□□ -0.53
PACSIN3-202ENST00000524509 LRP1BQ9NZR2 4599 aa11.71□□□□□ -0.53
PACSIN3-202ENST00000524509 LINC01546A6NGU7 62 aa11.71□□□□□ -0.53
PACSIN3-202ENST00000524509 C16orf90A8MZG2 172 aa11.71□□□□□ -0.53
PACSIN3-202ENST00000524509 SS18Q15532 418 aa11.71□□□□□ -0.53
PACSIN3-202ENST00000524509 C14orf177Q52M58 125 aa11.71□□□□□ -0.53
PACSIN3-202ENST00000524509 AP5S1Q9NUS5 200 aa11.71□□□□□ -0.53
PACSIN3-202ENST00000524509 COLCA2A8K830 154 aa11.7□□□□□ -0.54
PACSIN3-202ENST00000524509 CLPSL2Q6UWE3 100 aa11.7□□□□□ -0.54
PACSIN3-202ENST00000524509 C2orf66Q6UXQ4 117 aa11.7□□□□□ -0.54
PACSIN3-202ENST00000524509 Q6ZN92 141 aa11.7□□□□□ -0.54
PACSIN3-202ENST00000524509 Q8N1X5 172 aa11.7□□□□□ -0.54
PACSIN3-202ENST00000524509 A0A087WTM6 91 aa11.69□□□□□ -0.54
PACSIN3-202ENST00000524509 C1orf196B1AJZ1 125 aa11.69□□□□□ -0.54
PACSIN3-202ENST00000524509 LINC00614P0C842 121 aa11.69□□□□□ -0.54
PACSIN3-202ENST00000524509 RPL39P62891 51 aaKnown RBP11.69□□□□□ -0.54
PACSIN3-202ENST00000524509 C18orf32Q8TCD1 76 aa11.69□□□□□ -0.54
PACSIN3-202ENST00000524509 PGPEP1Q9NXJ5 209 aa11.69□□□□□ -0.54
PACSIN3-202ENST00000524509 IGKV3OR2-268A0A0C4DH90 116 aa11.67□□□□□ -0.54
PACSIN3-202ENST00000524509 TRGC2P03986 189 aa11.67□□□□□ -0.54
PACSIN3-202ENST00000524509 CDPF1Q6NVV7 123 aa11.67□□□□□ -0.54
PACSIN3-202ENST00000524509 CFAP161Q6P656 301 aa11.67□□□□□ -0.54
PACSIN3-202ENST00000524509 TOMM6Q96B49 74 aa11.67□□□□□ -0.54
PACSIN3-202ENST00000524509 TMEM141Q96I45 108 aa11.67□□□□□ -0.54
PACSIN3-202ENST00000524509 C2orf88Q9BSF0 95 aa11.67□□□□□ -0.54
PACSIN3-202ENST00000524509 LINC00959A0A1B0GUT2 108 aa11.66□□□□□ -0.54
PACSIN3-202ENST00000524509 NTN5Q8WTR8 489 aaPredicted RBP11.66□□□□□ -0.54
PACSIN3-202ENST00000524509 CHCHD1Q96BP2 118 aaKnown RBP11.66□□□□□ -0.54
PACSIN3-202ENST00000524509 TIMM17AQ99595 171 aa11.66□□□□□ -0.54
PACSIN3-202ENST00000524509 APOBP04114 4563 aaKnown RBP11.65□□□□□ -0.54
PACSIN3-202ENST00000524509 IGLV10-54A0A075B6I4 117 aa11.65□□□□□ -0.54
PACSIN3-202ENST00000524509 LRCOL1A6NCL2 159 aa11.65□□□□□ -0.54
PACSIN3-202ENST00000524509 ATP6V1G1O75348 118 aa11.65□□□□□ -0.54
PACSIN3-202ENST00000524509 TEX43Q6ZNM6 134 aa11.65□□□□□ -0.54
PACSIN3-202ENST00000524509 ERASQ7Z444 233 aa11.65□□□□□ -0.54
PACSIN3-202ENST00000524509 CHCHD10Q8WYQ3 142 aaPredicted RBP11.65□□□□□ -0.54
PACSIN3-202ENST00000524509 VCX2Q9H322 139 aa11.65□□□□□ -0.54
PACSIN3-202ENST00000524509 CD164L2Q6UWJ8 174 aa11.64□□□□□ -0.55
PACSIN3-202ENST00000524509 Q6ZUT4 128 aa11.64□□□□□ -0.55
PACSIN3-202ENST00000524509 BAGE3Q86Y29 109 aa11.64□□□□□ -0.55
PACSIN3-202ENST00000524509 SCGB3A1Q96QR1 104 aa11.64□□□□□ -0.55
PACSIN3-202ENST00000524509 Q8N814 137 aa11.63□□□□□ -0.55
PACSIN3-202ENST00000524509 BAALCQ8WXS3 180 aa11.63□□□□□ -0.55
PACSIN3-202ENST00000524509 IGLV4-3A0A075B6K6 122 aa11.62□□□□□ -0.55
PACSIN3-202ENST00000524509 TRAV13-1A0A0B4J241 112 aa11.62□□□□□ -0.55
PACSIN3-202ENST00000524509 GAGE12HA6NDE8 117 aa11.62□□□□□ -0.55
PACSIN3-202ENST00000524509 IGIPA6NJ69 53 aa11.62□□□□□ -0.55
PACSIN3-202ENST00000524509 IFITM10A6NMD0 228 aa11.62□□□□□ -0.55
PACSIN3-202ENST00000524509 SCO1O75880 301 aa11.62□□□□□ -0.55
PACSIN3-202ENST00000524509 SEC11AP67812 179 aa11.62□□□□□ -0.55
PACSIN3-202ENST00000524509 HBDP02042 147 aa11.61□□□□□ -0.55
PACSIN3-202ENST00000524509 XCL1P47992 114 aa11.61□□□□□ -0.55
PACSIN3-202ENST00000524509 KRTAP26-1Q6PEX3 210 aa11.61□□□□□ -0.55
PACSIN3-202ENST00000524509 SPATA12Q7Z6I5 190 aa11.61□□□□□ -0.55
PACSIN3-202ENST00000524509 DNAH5Q8TE73 4624 aa11.6□□□□□ -0.55
PACSIN3-202ENST00000524509 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.6□□□□□ -0.55
PACSIN3-202ENST00000524509 USP17L23D6RBM5 183 aa11.59□□□□□ -0.55
PACSIN3-202ENST00000524509 ATP5LO75964 103 aa11.59□□□□□ -0.55
PACSIN3-202ENST00000524509 RNASE13Q5GAN3 156 aaKnown RBP11.59□□□□□ -0.55
PACSIN3-202ENST00000524509 DMBT1Q9UGM3 2413 aaPredicted RBP11.58□□□□□ -0.56
PACSIN3-202ENST00000524509 COX7A2LO14548 114 aa11.58□□□□□ -0.56
PACSIN3-202ENST00000524509 HSBP1O75506 76 aa11.58□□□□□ -0.56
PACSIN3-202ENST00000524509 APOMO95445 188 aa11.58□□□□□ -0.56
PACSIN3-202ENST00000524509 MALP21145 153 aa11.58□□□□□ -0.56
PACSIN3-202ENST00000524509 FOXI1Q12951 378 aa11.58□□□□□ -0.56
PACSIN3-202ENST00000524509 AMELXQ99217 191 aa11.58□□□□□ -0.56
PACSIN3-202ENST00000524509 OPRPNQ99935 248 aaPredicted RBP11.58□□□□□ -0.56
PACSIN3-202ENST00000524509 IGLV5-52A0A0A0MRZ9 124 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms