RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 Q9HAA7 133 aa6.14□□□□□ -1.43
CSMD1-213ENST00000523488 J3QLI3 93 aa6.13□□□□□ -1.43
CSMD1-213ENST00000523488 PRO0628Q9UI54 55 aa6.13□□□□□ -1.43
CSMD1-213ENST00000523488 NDUFA1O15239 70 aa6.13□□□□□ -1.43
CSMD1-213ENST00000523488 C20orf173Q96LM9 149 aa6.13□□□□□ -1.43
CSMD1-213ENST00000523488 RBMY1BA6NDE4 496 aaKnown RBP6.13□□□□□ -1.43
CSMD1-213ENST00000523488 RBMY1EA6NEQ0 496 aaKnown RBP6.13□□□□□ -1.43
CSMD1-213ENST00000523488 M0QY20 66 aa6.13□□□□□ -1.43
CSMD1-213ENST00000523488 RBMY1DP0C7P1 496 aaKnown RBP6.13□□□□□ -1.43
CSMD1-213ENST00000523488 RBMY1A1P0DJD3 496 aaKnown RBP6.13□□□□□ -1.43
CSMD1-213ENST00000523488 RBMY1CP0DJD4 496 aa6.13□□□□□ -1.43
CSMD1-213ENST00000523488 MALP21145 153 aa6.13□□□□□ -1.43
CSMD1-213ENST00000523488 RBMY1FQ15415 496 aaKnown RBP6.13□□□□□ -1.43
CSMD1-213ENST00000523488 VSIG2Q96IQ7 327 aa6.13□□□□□ -1.43
CSMD1-213ENST00000523488 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.12□□□□□ -1.43
CSMD1-213ENST00000523488 C14orf132Q9NPU4 83 aa6.12□□□□□ -1.43
CSMD1-213ENST00000523488 TRBV10-3A0A0K0K1G6 114 aa6.12□□□□□ -1.43
CSMD1-213ENST00000523488 KHDC1LQ5JSQ8 128 aa6.12□□□□□ -1.43
CSMD1-213ENST00000523488 TNRC18O15417 2968 aaPredicted RBP6.11□□□□□ -1.43
CSMD1-213ENST00000523488 GHRHP01286 108 aa6.11□□□□□ -1.43
CSMD1-213ENST00000523488 RPL35AP18077 110 aaKnown RBP6.11□□□□□ -1.43
CSMD1-213ENST00000523488 C20orf197Q8N268 126 aa6.11□□□□□ -1.43
CSMD1-213ENST00000523488 IGHV7-81A0A0B4J1V7 117 aa6.11□□□□□ -1.43
CSMD1-213ENST00000523488 FAM236DA0A1B0GTK5 79 aa6.11□□□□□ -1.43
CSMD1-213ENST00000523488 NDUFC2O95298 119 aa6.11□□□□□ -1.43
CSMD1-213ENST00000523488 IGKV3-20P01619 116 aa6.11□□□□□ -1.43
CSMD1-213ENST00000523488 FAM236CP0DP71 79 aa6.11□□□□□ -1.43
CSMD1-213ENST00000523488 LINC00308Q8TCZ7 52 aa6.11□□□□□ -1.43
CSMD1-213ENST00000523488 Q9H8V8 135 aa6.11□□□□□ -1.43
CSMD1-213ENST00000523488 ATMQ13315 3056 aa6.11□□□□□ -1.43
CSMD1-213ENST00000523488 G3V318 75 aa6.11□□□□□ -1.43
CSMD1-213ENST00000523488 HTN1P15515 57 aa6.1□□□□□ -1.43
CSMD1-213ENST00000523488 ASPMQ8IZT6 3477 aa6.1□□□□□ -1.43
CSMD1-213ENST00000523488 IGHV3-73A0A0B4J1V6 119 aa6.1□□□□□ -1.43
CSMD1-213ENST00000523488 ATP6V0E1O15342 81 aa6.1□□□□□ -1.43
CSMD1-213ENST00000523488 GRNP28799 593 aaKnown RBP6.1□□□□□ -1.43
CSMD1-213ENST00000523488 ACANP16112 2415 aa6.1□□□□□ -1.43
CSMD1-213ENST00000523488 IGHG2P01859 326 aa6.1□□□□□ -1.43
CSMD1-213ENST00000523488 LINC00467Q9BRT7 94 aa6.1□□□□□ -1.43
CSMD1-213ENST00000523488 PKD1L2Q7Z442 2459 aa6.1□□□□□ -1.43
CSMD1-213ENST00000523488 CRPP02741 224 aa6.09□□□□□ -1.43
CSMD1-213ENST00000523488 PF4P02776 101 aa6.09□□□□□ -1.43
CSMD1-213ENST00000523488 MINOS1Q5TGZ0 78 aa6.09□□□□□ -1.43
CSMD1-213ENST00000523488 Q8N2B8 174 aa6.09□□□□□ -1.43
CSMD1-213ENST00000523488 MINOS1-NBL1R4GNA1 71 aa6.09□□□□□ -1.43
CSMD1-213ENST00000523488 ZNF462Q96JM2 2506 aa6.09□□□□□ -1.43
CSMD1-213ENST00000523488 TRAV23DV6A0A075B6W5 121 aa6.09□□□□□ -1.43
CSMD1-213ENST00000523488 RPL28P46779 137 aaKnown RBP6.09□□□□□ -1.43
CSMD1-213ENST00000523488 S100A7L2Q5SY68 101 aa6.09□□□□□ -1.43
CSMD1-213ENST00000523488 WFDC11Q8NEX6 87 aa6.09□□□□□ -1.43
CSMD1-213ENST00000523488 COL12A1Q99715 3063 aa6.09□□□□□ -1.44
CSMD1-213ENST00000523488 SMG1Q96Q15 3661 aaKnown RBP6.09□□□□□ -1.44
CSMD1-213ENST00000523488 FAM223AQ8IWN6 122 aa6.09□□□□□ -1.44
CSMD1-213ENST00000523488 LINC01561Q8N1V8 128 aa6.09□□□□□ -1.44
CSMD1-213ENST00000523488 Q8N9W7 124 aa6.09□□□□□ -1.44
CSMD1-213ENST00000523488 OVOL2Q9BRP0 275 aa6.09□□□□□ -1.44
CSMD1-213ENST00000523488 DMXL2Q8TDJ6 3036 aa6.08□□□□□ -1.44
CSMD1-213ENST00000523488 LINC00336Q6ZUF6 198 aa6.08□□□□□ -1.44
CSMD1-213ENST00000523488 ZNF292O60281 2723 aa6.08□□□□□ -1.44
CSMD1-213ENST00000523488 ADGRG4Q8IZF6 3080 aa6.08□□□□□ -1.44
CSMD1-213ENST00000523488 LINC00846Q9NV44 126 aa6.08□□□□□ -1.44
CSMD1-213ENST00000523488 FN1P02751 2386 aaKnown RBP6.08□□□□□ -1.44
CSMD1-213ENST00000523488 DMXL1Q9Y485 3027 aa6.08□□□□□ -1.44
CSMD1-213ENST00000523488 TRAV12-2A0A075B6T6 113 aa6.08□□□□□ -1.44
CSMD1-213ENST00000523488 FAM223BA6NKX1 122 aa6.08□□□□□ -1.44
CSMD1-213ENST00000523488 KNCNA6PVL3 124 aa6.08□□□□□ -1.44
CSMD1-213ENST00000523488 ATP5EP2Q5VTU8 51 aa6.08□□□□□ -1.44
CSMD1-213ENST00000523488 CDKN2A-AS1Q9UH64 79 aa6.08□□□□□ -1.44
CSMD1-213ENST00000523488 V9GYY9 64 aa6.08□□□□□ -1.44
CSMD1-213ENST00000523488 A0A0U1RQV1 116 aa6.07□□□□□ -1.44
CSMD1-213ENST00000523488 FHL2Q14192 279 aa6.07□□□□□ -1.44
CSMD1-213ENST00000523488 SS18Q15532 418 aa6.07□□□□□ -1.44
CSMD1-213ENST00000523488 UBE2D4Q9Y2X8 147 aa6.07□□□□□ -1.44
CSMD1-213ENST00000523488 HIST2H2BCQ6DN03 193 aa6.07□□□□□ -1.44
CSMD1-213ENST00000523488 HIST2H2BDQ6DRA6 164 aa6.07□□□□□ -1.44
CSMD1-213ENST00000523488 BRK1Q8WUW1 75 aa6.07□□□□□ -1.44
CSMD1-213ENST00000523488 AKAP13Q12802 2813 aa6.07□□□□□ -1.44
CSMD1-213ENST00000523488 TRAV13-2A0A0B4J235 113 aa6.07□□□□□ -1.44
CSMD1-213ENST00000523488 IGHV3-16A0A0C4DH30 117 aa6.07□□□□□ -1.44
CSMD1-213ENST00000523488 E7EQL1 145 aa6.07□□□□□ -1.44
CSMD1-213ENST00000523488 LY6G6DO95868 133 aa6.07□□□□□ -1.44
CSMD1-213ENST00000523488 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.06□□□□□ -1.44
CSMD1-213ENST00000523488 IGKV2-29A2NJV5 120 aaPredicted RBP6.06□□□□□ -1.44
CSMD1-213ENST00000523488 LY6EQ16553 131 aa6.06□□□□□ -1.44
CSMD1-213ENST00000523488 ESM1Q9NQ30 184 aa6.06□□□□□ -1.44
CSMD1-213ENST00000523488 SERP1Q9Y6X1 66 aa6.06□□□□□ -1.44
CSMD1-213ENST00000523488 RBM3P98179 157 aaKnown RBP6.06□□□□□ -1.44
CSMD1-213ENST00000523488 H3BUA1 57 aa6.05□□□□□ -1.44
CSMD1-213ENST00000523488 TRBV12-3P01733 135 aa6.05□□□□□ -1.44
CSMD1-213ENST00000523488 IGHV3-11P01762 117 aa6.05□□□□□ -1.44
CSMD1-213ENST00000523488 FAM218AQ96MZ4 157 aa6.05□□□□□ -1.44
CSMD1-213ENST00000523488 CHCHD7Q9BUK0 85 aa6.05□□□□□ -1.44
CSMD1-213ENST00000523488 DOPEY1Q5JWR5 2465 aa6.05□□□□□ -1.44
CSMD1-213ENST00000523488 FLNBO75369 2602 aaKnown RBP6.05□□□□□ -1.44
CSMD1-213ENST00000523488 SEC61GP60059 68 aa6.05□□□□□ -1.44
CSMD1-213ENST00000523488 RHPN1-AS1Q9BWJ2 59 aa6.05□□□□□ -1.44
CSMD1-213ENST00000523488 DCHS1Q96JQ0 3298 aa6.05□□□□□ -1.44
CSMD1-213ENST00000523488 NCR3O14931 201 aa6.04□□□□□ -1.44
CSMD1-213ENST00000523488 HILS1P60008 231 aa6.04□□□□□ -1.44
CSMD1-213ENST00000523488 C1orf195Q5TG92 126 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms