RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 UBE2G1P62253 170 aa2.46□□□□□ -2.02
CTNNA1-238ENST00000523298 TMEM170BQ5T4T1 132 aa2.46□□□□□ -2.02
CTNNA1-238ENST00000523298 CYP2G1PQ6ZSU1 146 aa2.46□□□□□ -2.02
CTNNA1-238ENST00000523298 RPRMLQ8N4K4 120 aa2.46□□□□□ -2.02
CTNNA1-238ENST00000523298 LINC01560Q8TB33 94 aa2.46□□□□□ -2.02
CTNNA1-238ENST00000523298 DYNLRB2Q8TF09 96 aa2.46□□□□□ -2.02
CTNNA1-238ENST00000523298 U3KQK5 164 aa2.46□□□□□ -2.02
CTNNA1-238ENST00000523298 CEP250Q9BV73 2442 aa2.46□□□□□ -2.02
CTNNA1-238ENST00000523298 A0A0C4DFX4 3053 aa2.45□□□□□ -2.02
CTNNA1-238ENST00000523298 ZNF407Q9C0G0 2248 aa2.45□□□□□ -2.02
CTNNA1-238ENST00000523298 SPTBN4Q9H254 2564 aa2.45□□□□□ -2.02
CTNNA1-238ENST00000523298 LOC107984156A0A0G2JMH3 177 aa2.45□□□□□ -2.02
CTNNA1-238ENST00000523298 A8MUU9 505 aa2.45□□□□□ -2.02
CTNNA1-238ENST00000523298 ACYP1P07311 99 aa2.45□□□□□ -2.02
CTNNA1-238ENST00000523298 C3orf79P0CE67 100 aa2.45□□□□□ -2.02
CTNNA1-238ENST00000523298 COX8AP10176 69 aa2.45□□□□□ -2.02
CTNNA1-238ENST00000523298 ZNF117Q03924 483 aa2.45□□□□□ -2.02
CTNNA1-238ENST00000523298 FAM229BQ4G0N7 80 aa2.45□□□□□ -2.02
CTNNA1-238ENST00000523298 C1orf134Q5TEV5 83 aa2.45□□□□□ -2.02
CTNNA1-238ENST00000523298 RPL7L1Q6DKI1 246 aaKnown RBP2.45□□□□□ -2.02
CTNNA1-238ENST00000523298 LINC00643Q86TS7 51 aa2.45□□□□□ -2.02
CTNNA1-238ENST00000523298 ARL17AQ8IVW1 177 aa2.45□□□□□ -2.02
CTNNA1-238ENST00000523298 MUC7Q8TAX7 377 aa2.45□□□□□ -2.02
CTNNA1-238ENST00000523298 TVP23CQ96ET8 276 aa2.45□□□□□ -2.02
CTNNA1-238ENST00000523298 ZFHX2Q9C0A1 2572 aaPredicted RBP2.45□□□□□ -2.02
CTNNA1-238ENST00000523298 DMDP11532 3685 aa2.45□□□□□ -2.02
CTNNA1-238ENST00000523298 WDFY4Q6ZS81 3184 aa2.45□□□□□ -2.02
CTNNA1-238ENST00000523298 MUC3AQ02505 3323 aa2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 IGKV1D-37A0A075B6S9 117 aa2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 IGKV1OR2-108A0A075B7D4 117 aa2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 FXYD6-FXYD2A0A087WZ82 144 aa2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 IGHV3-73A0A0B4J1V6 119 aa2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 TRAV3A0A0B4J244 114 aa2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 PIGBOS1A0A0B4J2F0 54 aa2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 SNRPGP15A8MWD9 76 aa2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 CCL22O00626 93 aa2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 BCE1O60756 84 aa2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 DEFA4P12838 97 aa2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 ZNF22P17026 224 aaPredicted RBP2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 KLKP1Q107X0 134 aa2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 FAM27BQ5VT28 67 aa2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 SLC48A1Q6P1K1 146 aa2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 IGFL1Q6UW32 110 aa2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 LYZL1Q6UWQ5 148 aa2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 Q6ZQT0 140 aa2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 LYZL2Q7Z4W2 148 aa2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 VMO1Q7Z5L0 202 aa2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 SMIM7Q9BQ49 75 aa2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 FXYD6Q9H0Q3 95 aa2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 MANBALQ9NQG1 85 aa2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 NHP2Q9NX24 153 aaKnown RBP2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 ICOSQ9Y6W8 199 aa2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 KIAA2026Q5HYC2 2103 aa2.44□□□□□ -2.02
CTNNA1-238ENST00000523298 MYO15AQ9UKN7 3530 aa2.43□□□□□ -2.02
CTNNA1-238ENST00000523298 TRAV7A0A075B6U4 112 aa2.43□□□□□ -2.02
CTNNA1-238ENST00000523298 A0A0G2JND7 137 aa2.43□□□□□ -2.02
CTNNA1-238ENST00000523298 C17orf98A8MV24 154 aa2.43□□□□□ -2.02
CTNNA1-238ENST00000523298 CRPP02741 224 aa2.43□□□□□ -2.02
CTNNA1-238ENST00000523298 CD24P25063 80 aa2.43□□□□□ -2.02
CTNNA1-238ENST00000523298 DEFB121Q5J5C9 76 aa2.43□□□□□ -2.02
CTNNA1-238ENST00000523298 ZCCHC23Q6ZST2 131 aa2.43□□□□□ -2.02
CTNNA1-238ENST00000523298 FAM223AQ8IWN6 122 aa2.43□□□□□ -2.02
CTNNA1-238ENST00000523298 CYP4F30PQ9H0H9 118 aa2.43□□□□□ -2.02
CTNNA1-238ENST00000523298 GVINP1Q7Z2Y8 2422 aa2.43□□□□□ -2.02
CTNNA1-238ENST00000523298 DNAH14Q0VDD8 3507 aa2.43□□□□□ -2.02
CTNNA1-238ENST00000523298 DOCK10Q96BY6 2186 aa2.43□□□□□ -2.02
CTNNA1-238ENST00000523298 FREM3P0C091 2139 aa2.42□□□□□ -2.02
CTNNA1-238ENST00000523298 SDK2Q58EX2 2172 aa2.42□□□□□ -2.02
CTNNA1-238ENST00000523298 MED13Q9UHV7 2174 aa2.42□□□□□ -2.02
CTNNA1-238ENST00000523298 A0A0B4J2C4 111 aa2.42□□□□□ -2.02
CTNNA1-238ENST00000523298 TRBV10-3A0A0K0K1G6 114 aa2.42□□□□□ -2.02
CTNNA1-238ENST00000523298 TRBV10-2A0A0K0K1G8 114 aa2.42□□□□□ -2.02
CTNNA1-238ENST00000523298 LOC285095A0A1B0GVY8 99 aa2.42□□□□□ -2.02
CTNNA1-238ENST00000523298 UBE2D3P61077 147 aa2.42□□□□□ -2.02
CTNNA1-238ENST00000523298 UBE2D2P62837 147 aa2.42□□□□□ -2.02
CTNNA1-238ENST00000523298 ZNF56Q15929 161 aa2.42□□□□□ -2.02
CTNNA1-238ENST00000523298 NNATQ16517 81 aa2.42□□□□□ -2.02
CTNNA1-238ENST00000523298 PYDC2Q56P42 97 aa2.42□□□□□ -2.02
CTNNA1-238ENST00000523298 C9orf116Q5BN46 136 aaPredicted RBP2.42□□□□□ -2.02
CTNNA1-238ENST00000523298 PP632Q6XCG6 107 aa2.42□□□□□ -2.02
CTNNA1-238ENST00000523298 ZNF826PQ6ZT77 177 aa2.42□□□□□ -2.02
CTNNA1-238ENST00000523298 MIR7-3HGQ8N6C7 128 aa2.42□□□□□ -2.02
CTNNA1-238ENST00000523298 BPESC1Q9GZL8 116 aa2.42□□□□□ -2.02
CTNNA1-238ENST00000523298 HILPDAQ9Y5L2 63 aa2.42□□□□□ -2.02
CTNNA1-238ENST00000523298 S4R3C0 116 aa2.42□□□□□ -2.02
CTNNA1-238ENST00000523298 NINQ8N4C6 2090 aa2.41□□□□□ -2.02
CTNNA1-238ENST00000523298 VPS13AQ96RL7 3174 aa2.41□□□□□ -2.02
CTNNA1-238ENST00000523298 ACACAQ13085 2346 aa2.41□□□□□ -2.02
CTNNA1-238ENST00000523298 WDR87Q6ZQQ6 2873 aa2.41□□□□□ -2.02
CTNNA1-238ENST00000523298 IGKV1D-42A0A075B6H8 117 aa2.41□□□□□ -2.02
CTNNA1-238ENST00000523298 TRBV7-1A0A0A6YYK4 115 aa2.41□□□□□ -2.02
CTNNA1-238ENST00000523298 HCG22E2RYF7 251 aa2.41□□□□□ -2.02
CTNNA1-238ENST00000523298 FXYD1O00168 92 aa2.41□□□□□ -2.02
CTNNA1-238ENST00000523298 LHBP01229 141 aa2.41□□□□□ -2.02
CTNNA1-238ENST00000523298 IGLV3-19P01714 112 aa2.41□□□□□ -2.02
CTNNA1-238ENST00000523298 SPINT3P49223 89 aa2.41□□□□□ -2.02
CTNNA1-238ENST00000523298 FXYD2P54710 66 aa2.41□□□□□ -2.02
CTNNA1-238ENST00000523298 SMIM11AP58511 58 aa2.41□□□□□ -2.02
CTNNA1-238ENST00000523298 DEFB133Q30KQ1 61 aa2.41□□□□□ -2.02
CTNNA1-238ENST00000523298 ZNF791Q3KP31 576 aaPredicted RBP2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms