RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 IGHV3-66A0A0C4DH42 116 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 A0A0J9YXV3 536 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 A0A0U1RQV1 116 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 F5H768 121 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 INS-IGF2F8WCM5 200 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 H7C1H1 209 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 M0QXV9 152 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 CRXO43186 299 aaPredicted RBP2.39□□□□□ -2.03
VPS13B-208ENST00000521037 ZNF324O75467 553 aaPredicted RBP2.39□□□□□ -2.03
VPS13B-208ENST00000521037 ZNF688P0C7X2 276 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 LINC00869P0C866 280 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 ARL14EPLP0DKL9 152 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 IGLC2P0DOY2 106 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 IGLC3P0DOY3 106 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 G0S2P27469 103 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 G6PCP35575 357 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 CTRLP40313 264 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 FXYD7P58549 80 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 HSPE1P61604 102 aaKnown RBP2.39□□□□□ -2.03
VPS13B-208ENST00000521037 DAD1P61803 113 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 RPL30P62888 115 aaKnown RBP2.39□□□□□ -2.03
VPS13B-208ENST00000521037 WT1-ASQ06250 92 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 AMTNQ6UX39 209 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
VPS13B-208ENST00000521037 FAM19A1Q7Z5A9 133 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 TMEM167AQ8TBQ9 72 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 RNF185Q96GF1 192 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 VGLL1Q99990 258 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 ST20Q9HBF5 79 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 ENY2Q9NPA8 101 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 ZNF331Q9NQX6 463 aaPredicted RBP2.39□□□□□ -2.03
VPS13B-208ENST00000521037 NAT8BQ9UHF3 227 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 PRNDQ9UKY0 176 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 LAMTOR2Q9Y2Q5 125 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 V9GYV3 84 aa2.39□□□□□ -2.03
VPS13B-208ENST00000521037 NEBP20929 6669 aa2.38□□□□□ -2.03
VPS13B-208ENST00000521037 TRBV20OR9-2A0A075B6H5 130 aa2.38□□□□□ -2.03
VPS13B-208ENST00000521037 TRAV30A0A087WSZ9 112 aa2.38□□□□□ -2.03
VPS13B-208ENST00000521037 A0A0J9YXY3 114 aa2.38□□□□□ -2.03
VPS13B-208ENST00000521037 SMIM27A0A1W2PRY6 76 aa2.38□□□□□ -2.03
VPS13B-208ENST00000521037 M0R1X1 148 aa2.38□□□□□ -2.03
VPS13B-208ENST00000521037 APCSP02743 223 aa2.38□□□□□ -2.03
VPS13B-208ENST00000521037 HIST1H1EP10412 219 aaKnown RBP2.38□□□□□ -2.03
VPS13B-208ENST00000521037 HLA-DRB4P13762 266 aa2.38□□□□□ -2.03
VPS13B-208ENST00000521037 ATP5G3P48201 142 aa2.38□□□□□ -2.03
VPS13B-208ENST00000521037 ZNF138P52744 262 aa2.38□□□□□ -2.03
VPS13B-208ENST00000521037 KRTDAPP60985 99 aa2.38□□□□□ -2.03
VPS13B-208ENST00000521037 KRTAP19-2Q3LHN2 52 aa2.38□□□□□ -2.03
VPS13B-208ENST00000521037 SPATA45Q537H7 98 aa2.38□□□□□ -2.03
VPS13B-208ENST00000521037 C2orf83Q53S99 150 aa2.38□□□□□ -2.03
VPS13B-208ENST00000521037 CENPWQ5EE01 88 aa2.38□□□□□ -2.03
VPS13B-208ENST00000521037 IBA57Q5T440 356 aaKnown RBP2.38□□□□□ -2.03
VPS13B-208ENST00000521037 TMEM136Q6ZRR5 245 aa2.38□□□□□ -2.03
VPS13B-208ENST00000521037 LINC00173Q6ZV60 143 aa2.38□□□□□ -2.03
VPS13B-208ENST00000521037 C11orf72Q8NBR9 251 aa2.38□□□□□ -2.03
VPS13B-208ENST00000521037 OR1L8Q8NGR8 309 aa2.38□□□□□ -2.03
VPS13B-208ENST00000521037 CHCHD1Q96BP2 118 aaKnown RBP2.38□□□□□ -2.03
VPS13B-208ENST00000521037 FAM19A4Q96LR4 140 aa2.38□□□□□ -2.03
VPS13B-208ENST00000521037 MGST2Q99735 147 aa2.38□□□□□ -2.03
VPS13B-208ENST00000521037 PMCHL2Q9BQD1 86 aa2.38□□□□□ -2.03
VPS13B-208ENST00000521037 TP53TG3Q9ULZ0 132 aa2.38□□□□□ -2.03
VPS13B-208ENST00000521037 HLA-DRB4X5D2U9 266 aa2.38□□□□□ -2.03
VPS13B-208ENST00000521037 IGHV3-21A0A0B4J1V1 117 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 TRAV3A0A0B4J244 114 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 A0A0J9YY99 117 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 GRIFINA4D1Z8 144 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 A8MWL6 223 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 H3BNG1 76 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 I3L2K1 104 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 K7ERU9 68 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 NUPR1O60356 82 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 HYPMO75409 117 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 PPBPP02775 128 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 ATP5G1P05496 136 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 DEFB130BP0DP73 79 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 DEFB130AP0DP74 79 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 TSPOP30536 169 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 UBE2G1P62253 170 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 PRCDQ00LT1 54 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 KRTAP13-3Q3SY46 172 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 MIC13Q5XKP0 118 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 MRPL54Q6P161 138 aaKnown RBP2.37□□□□□ -2.03
VPS13B-208ENST00000521037 ZNF493Q6ZR52 646 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 SMIM15Q7Z3B0 74 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 S100A7AQ86SG5 101 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 WFDC10BQ8IUB3 73 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 BOD1L2Q8IYS8 172 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 OR8I2Q8N0Y5 310 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 Q8N976 141 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 VSTM2AQ8TAG5 236 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 TSKUQ8WUA8 353 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 TMEM101Q96IK0 257 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 DERL1Q9BUN8 251 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 KRTAP4-1Q9BYQ7 146 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 HSPB8Q9UJY1 196 aa2.37□□□□□ -2.03
VPS13B-208ENST00000521037 F11RQ9Y624 299 aaKnown RBP2.37□□□□□ -2.03
VPS13B-208ENST00000521037 IGKV3D-20A0A0C4DH25 116 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 TRBV6-1A0A0K0K1D8 114 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 KRTAP16-1A8MUX0 517 aa2.36□□□□□ -2.03
VPS13B-208ENST00000521037 M0R2Z0 102 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms