RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 COX11Q9Y6N1 276 aa11.66□□□□□ -0.54
TRAM1-203ENST00000520700 RPL39P62891 51 aaKnown RBP11.65□□□□□ -0.54
TRAM1-203ENST00000520700 MRPS36P82909 103 aaKnown RBP11.65□□□□□ -0.54
TRAM1-203ENST00000520700 REG3AQ06141 175 aa11.65□□□□□ -0.54
TRAM1-203ENST00000520700 DGAT2L7PQ6IED9 249 aa11.65□□□□□ -0.54
TRAM1-203ENST00000520700 ZNF664Q8N3J9 261 aa11.65□□□□□ -0.54
TRAM1-203ENST00000520700 RMI2Q96E14 147 aa11.65□□□□□ -0.54
TRAM1-203ENST00000520700 URB1-AS1Q96HZ7 61 aa11.65□□□□□ -0.54
TRAM1-203ENST00000520700 TM2D2Q9BX73 214 aa11.65□□□□□ -0.54
TRAM1-203ENST00000520700 CYSLTR1Q9Y271 337 aa11.65□□□□□ -0.54
TRAM1-203ENST00000520700 TRAV8-4A0A0B4J246 113 aa11.64□□□□□ -0.55
TRAM1-203ENST00000520700 CRPP02741 224 aa11.64□□□□□ -0.55
TRAM1-203ENST00000520700 C2orf66Q6UXQ4 117 aa11.64□□□□□ -0.55
TRAM1-203ENST00000520700 AP5S1Q9NUS5 200 aa11.64□□□□□ -0.55
TRAM1-203ENST00000520700 FAM104AQ969W3 186 aa11.63□□□□□ -0.55
TRAM1-203ENST00000520700 TOMM6Q96B49 74 aa11.63□□□□□ -0.55
TRAM1-203ENST00000520700 CHCHD1Q96BP2 118 aaKnown RBP11.62□□□□□ -0.55
TRAM1-203ENST00000520700 Q9HAA7 133 aa11.62□□□□□ -0.55
TRAM1-203ENST00000520700 FRAS1Q86XX4 4008 aa11.61□□□□□ -0.55
TRAM1-203ENST00000520700 IGIPA6NJ69 53 aa11.61□□□□□ -0.55
TRAM1-203ENST00000520700 CCL25O15444 150 aa11.61□□□□□ -0.55
TRAM1-203ENST00000520700 FAT2Q9NYQ8 4349 aa11.61□□□□□ -0.55
TRAM1-203ENST00000520700 KRTAP26-1Q6PEX3 210 aa11.6□□□□□ -0.55
TRAM1-203ENST00000520700 TIMM17AQ99595 171 aa11.6□□□□□ -0.55
TRAM1-203ENST00000520700 C1orf43Q9BWL3 253 aa11.6□□□□□ -0.55
TRAM1-203ENST00000520700 ERASQ7Z444 233 aa11.59□□□□□ -0.55
TRAM1-203ENST00000520700 IGLV4-3A0A075B6K6 122 aa11.58□□□□□ -0.56
TRAM1-203ENST00000520700 IGKV2D-24A0A075B6R9 120 aa11.58□□□□□ -0.56
TRAM1-203ENST00000520700 LINC00959A0A1B0GUT2 108 aa11.58□□□□□ -0.56
TRAM1-203ENST00000520700 Q6ZUT4 128 aa11.58□□□□□ -0.56
TRAM1-203ENST00000520700 TMEM141Q96I45 108 aa11.58□□□□□ -0.56
TRAM1-203ENST00000520700 A0A096LNJ9 63 aa11.57□□□□□ -0.56
TRAM1-203ENST00000520700 PRSS29PA6NIE9 313 aa11.57□□□□□ -0.56
TRAM1-203ENST00000520700 PAPPA-AS1Q5QFB9 102 aa11.57□□□□□ -0.56
TRAM1-203ENST00000520700 CLPSL2Q6UWE3 100 aa11.57□□□□□ -0.56
TRAM1-203ENST00000520700 BAGE3Q86Y29 109 aa11.57□□□□□ -0.56
TRAM1-203ENST00000520700 PSCAO43653 123 aa11.56□□□□□ -0.56
TRAM1-203ENST00000520700 HIST1H2BKO60814 126 aa11.56□□□□□ -0.56
TRAM1-203ENST00000520700 HBDP02042 147 aa11.56□□□□□ -0.56
TRAM1-203ENST00000520700 HIST1H2BJP06899 126 aa11.56□□□□□ -0.56
TRAM1-203ENST00000520700 HIST1H2BOP23527 126 aa11.56□□□□□ -0.56
TRAM1-203ENST00000520700 HIST1H2BBP33778 126 aa11.56□□□□□ -0.56
TRAM1-203ENST00000520700 HIST1H2BDP58876 126 aa11.56□□□□□ -0.56
TRAM1-203ENST00000520700 HIST1H2BCP62807 126 aa11.56□□□□□ -0.56
TRAM1-203ENST00000520700 TNP2Q05952 138 aa11.56□□□□□ -0.56
TRAM1-203ENST00000520700 HIST2H2BEQ16778 126 aa11.56□□□□□ -0.56
TRAM1-203ENST00000520700 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.56□□□□□ -0.56
TRAM1-203ENST00000520700 MAPKAPK5-AS1Q8N8E1 139 aa11.56□□□□□ -0.56
TRAM1-203ENST00000520700 HIST1H2BHQ93079 126 aa11.56□□□□□ -0.56
TRAM1-203ENST00000520700 SCGB3A1Q96QR1 104 aa11.56□□□□□ -0.56
TRAM1-203ENST00000520700 AMELXQ99217 191 aa11.56□□□□□ -0.56
TRAM1-203ENST00000520700 HIST1H2BNQ99877 126 aa11.56□□□□□ -0.56
TRAM1-203ENST00000520700 HIST1H2BMQ99879 126 aa11.56□□□□□ -0.56
TRAM1-203ENST00000520700 OPRPNQ99935 248 aaPredicted RBP11.56□□□□□ -0.56
TRAM1-203ENST00000520700 LRCOL1A6NCL2 159 aa11.55□□□□□ -0.56
TRAM1-203ENST00000520700 C1orf196B1AJZ1 125 aa11.55□□□□□ -0.56
TRAM1-203ENST00000520700 SS18Q15532 418 aa11.55□□□□□ -0.56
TRAM1-203ENST00000520700 PDZD11Q5EBL8 140 aa11.55□□□□□ -0.56
TRAM1-203ENST00000520700 DNAH11Q96DT5 4516 aa11.54□□□□□ -0.56
TRAM1-203ENST00000520700 CHCHD10Q8WYQ3 142 aaPredicted RBP11.54□□□□□ -0.56
TRAM1-203ENST00000520700 VCX2Q9H322 139 aa11.54□□□□□ -0.56
TRAM1-203ENST00000520700 LINC00310P59036 64 aa11.53□□□□□ -0.56
TRAM1-203ENST00000520700 Q6ZN92 141 aa11.53□□□□□ -0.56
TRAM1-203ENST00000520700 TEX43Q6ZNM6 134 aa11.53□□□□□ -0.56
TRAM1-203ENST00000520700 IGLV10-54A0A075B6I4 117 aa11.52□□□□□ -0.57
TRAM1-203ENST00000520700 A0A087WTM6 91 aa11.52□□□□□ -0.57
TRAM1-203ENST00000520700 IGKV3OR2-268A0A0C4DH90 116 aa11.52□□□□□ -0.57
TRAM1-203ENST00000520700 HSBP1O75506 76 aa11.52□□□□□ -0.57
TRAM1-203ENST00000520700 SERF1AO75920 110 aa11.52□□□□□ -0.57
TRAM1-203ENST00000520700 RNASE13Q5GAN3 156 aaKnown RBP11.52□□□□□ -0.57
TRAM1-203ENST00000520700 CD164L2Q6UWJ8 174 aa11.52□□□□□ -0.57
TRAM1-203ENST00000520700 LINC00173Q6ZV60 143 aa11.52□□□□□ -0.57
TRAM1-203ENST00000520700 A0A1B0GVY2 172 aa11.51□□□□□ -0.57
TRAM1-203ENST00000520700 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.51□□□□□ -0.57
TRAM1-203ENST00000520700 COA6Q5JTJ3 125 aaKnown RBP11.51□□□□□ -0.57
TRAM1-203ENST00000520700 FAM19A3Q7Z5A8 133 aa11.51□□□□□ -0.57
TRAM1-203ENST00000520700 TRAV13-1A0A0B4J241 112 aa11.5□□□□□ -0.57
TRAM1-203ENST00000520700 GAGE12HA6NDE8 117 aa11.5□□□□□ -0.57
TRAM1-203ENST00000520700 IFITM10A6NMD0 228 aa11.5□□□□□ -0.57
TRAM1-203ENST00000520700 ATP5LO75964 103 aa11.5□□□□□ -0.57
TRAM1-203ENST00000520700 FOXI1Q12951 378 aa11.5□□□□□ -0.57
TRAM1-203ENST00000520700 C2orf88Q9BSF0 95 aa11.5□□□□□ -0.57
TRAM1-203ENST00000520700 EREGO14944 169 aa11.49□□□□□ -0.57
TRAM1-203ENST00000520700 NUPR1O60356 82 aa11.49□□□□□ -0.57
TRAM1-203ENST00000520700 UBE2D1P51668 147 aa11.49□□□□□ -0.57
TRAM1-203ENST00000520700 PMCHL1Q16048 86 aa11.49□□□□□ -0.57
TRAM1-203ENST00000520700 BAALCQ8WXS3 180 aa11.49□□□□□ -0.57
TRAM1-203ENST00000520700 PKD1P98161 4303 aa11.49□□□□□ -0.57
TRAM1-203ENST00000520700 XCL1P47992 114 aa11.47□□□□□ -0.57
TRAM1-203ENST00000520700 C14orf177Q52M58 125 aa11.47□□□□□ -0.57
TRAM1-203ENST00000520700 LINC00242Q5T6M2 205 aa11.47□□□□□ -0.57
TRAM1-203ENST00000520700 CST9LQ9H4G1 147 aa11.47□□□□□ -0.57
TRAM1-203ENST00000520700 IGHV3OR16-9A0A0B4J2B5 98 aa11.46□□□□□ -0.57
TRAM1-203ENST00000520700 SEC11AP67812 179 aa11.46□□□□□ -0.57
TRAM1-203ENST00000520700 WFDC2Q14508 124 aa11.46□□□□□ -0.57
TRAM1-203ENST00000520700 PMVKQ15126 192 aa11.46□□□□□ -0.57
TRAM1-203ENST00000520700 CFAP161Q6P656 301 aa11.46□□□□□ -0.57
TRAM1-203ENST00000520700 FAM19A2Q8N3H0 131 aa11.46□□□□□ -0.57
TRAM1-203ENST00000520700 USP17L23D6RBM5 183 aa11.45□□□□□ -0.58
TRAM1-203ENST00000520700 ZC2HC1BQ5TFG8 222 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms