RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 K7EQD1 137 aa7.15□□□□□ -1.27
SPARC-202ENST00000520687 Q6ZSN1 163 aa7.15□□□□□ -1.27
SPARC-202ENST00000520687 CHCHD7Q9BUK0 85 aa7.15□□□□□ -1.27
SPARC-202ENST00000520687 CSDC2Q9Y534 153 aaKnown RBP7.15□□□□□ -1.27
SPARC-202ENST00000520687 AGRNO00468 2067 aa7.14□□□□□ -1.27
SPARC-202ENST00000520687 TINCRA0A1B0GVN0 87 aa7.14□□□□□ -1.27
SPARC-202ENST00000520687 TRBV6-4A0A1B0GX49 114 aa7.14□□□□□ -1.27
SPARC-202ENST00000520687 TMEM223A0PJW6 202 aa7.14□□□□□ -1.27
SPARC-202ENST00000520687 H7C423 109 aa7.14□□□□□ -1.27
SPARC-202ENST00000520687 PRM2P04554 102 aa7.14□□□□□ -1.27
SPARC-202ENST00000520687 LGALS3P17931 250 aaKnown RBP7.14□□□□□ -1.27
SPARC-202ENST00000520687 SCGB1D4Q6XE38 83 aa7.14□□□□□ -1.27
SPARC-202ENST00000520687 ZNRF2Q8NHG8 242 aa7.14□□□□□ -1.27
SPARC-202ENST00000520687 GTSF1LQ9H1H1 148 aa7.14□□□□□ -1.27
SPARC-202ENST00000520687 SPANXB1Q9NS25 103 aaPredicted RBP7.14□□□□□ -1.27
SPARC-202ENST00000520687 BIRC6Q9NR09 4857 aa7.13□□□□□ -1.27
SPARC-202ENST00000520687 A0A1B0GWB2 263 aa7.13□□□□□ -1.27
SPARC-202ENST00000520687 J3QQQ9 107 aa7.13□□□□□ -1.27
SPARC-202ENST00000520687 RPL35AP18077 110 aaKnown RBP7.13□□□□□ -1.27
SPARC-202ENST00000520687 KRTAP10-3P60369 221 aa7.13□□□□□ -1.27
SPARC-202ENST00000520687 TTTY13Q9BZ97 58 aa7.13□□□□□ -1.27
SPARC-202ENST00000520687 UBE2D4Q9Y2X8 147 aa7.13□□□□□ -1.27
SPARC-202ENST00000520687 IGLL5B9A064 214 aa7.12□□□□□ -1.27
SPARC-202ENST00000520687 ZNF22P17026 224 aaPredicted RBP7.12□□□□□ -1.27
SPARC-202ENST00000520687 TIRAPP58753 221 aa7.12□□□□□ -1.27
SPARC-202ENST00000520687 UBE2D3P61077 147 aa7.12□□□□□ -1.27
SPARC-202ENST00000520687 UBE2D2P62837 147 aa7.12□□□□□ -1.27
SPARC-202ENST00000520687 DGAT2L7PQ6IED9 249 aa7.12□□□□□ -1.27
SPARC-202ENST00000520687 Q6ZTI0 123 aa7.12□□□□□ -1.27
SPARC-202ENST00000520687 KIR2DL5BQ8NHK3 375 aa7.12□□□□□ -1.27
SPARC-202ENST00000520687 NOP10Q9NPE3 64 aaKnown RBP7.12□□□□□ -1.27
SPARC-202ENST00000520687 TRGV2A0A075B6R0 118 aa7.12□□□□□ -1.27
SPARC-202ENST00000520687 PLAC8L1A1L4L8 177 aa7.12□□□□□ -1.27
SPARC-202ENST00000520687 SRSF9Q13242 221 aaKnown RBP eCLIP7.12□□□□□ -1.27
SPARC-202ENST00000520687 SLC25A29Q8N8R3 303 aa7.12□□□□□ -1.27
SPARC-202ENST00000520687 ZNF479Q96JC4 524 aa7.12□□□□□ -1.27
SPARC-202ENST00000520687 NHP2Q9NX24 153 aaKnown RBP7.12□□□□□ -1.27
SPARC-202ENST00000520687 SORL1Q92673 2214 aa7.11□□□□□ -1.27
SPARC-202ENST00000520687 A0A0J9YXV3 536 aa7.11□□□□□ -1.27
SPARC-202ENST00000520687 A0A0J9YY99 117 aa7.11□□□□□ -1.27
SPARC-202ENST00000520687 K7ERJ3 54 aa7.11□□□□□ -1.27
SPARC-202ENST00000520687 C12orf74Q32Q52 190 aa7.11□□□□□ -1.27
SPARC-202ENST00000520687 FAM19A3Q7Z5A8 133 aa7.11□□□□□ -1.27
SPARC-202ENST00000520687 OPRPNQ99935 248 aaPredicted RBP7.11□□□□□ -1.27
SPARC-202ENST00000520687 CITED1Q99966 193 aa7.11□□□□□ -1.27
SPARC-202ENST00000520687 F8W1H4 67 aa7.1□□□□□ -1.27
SPARC-202ENST00000520687 LINC00612Q8N6U2 182 aa7.1□□□□□ -1.27
SPARC-202ENST00000520687 GEMIN7Q9H840 131 aaKnown RBP7.1□□□□□ -1.27
SPARC-202ENST00000520687 IGLV5-45A0A087WSX0 123 aa7.09□□□□□ -1.27
SPARC-202ENST00000520687 TRGV4A0A0C4DH28 118 aa7.09□□□□□ -1.27
SPARC-202ENST00000520687 TMEM238C9JI98 176 aa7.09□□□□□ -1.27
SPARC-202ENST00000520687 SCGB1A1P11684 91 aa7.09□□□□□ -1.27
SPARC-202ENST00000520687 EMP1P54849 157 aa7.09□□□□□ -1.27
SPARC-202ENST00000520687 APOC4P55056 127 aa7.09□□□□□ -1.27
SPARC-202ENST00000520687 WFDC9Q8NEX5 89 aa7.09□□□□□ -1.27
SPARC-202ENST00000520687 DEFB104AQ8WTQ1 72 aa7.09□□□□□ -1.27
SPARC-202ENST00000520687 FAM104AQ969W3 186 aa7.09□□□□□ -1.27
SPARC-202ENST00000520687 IGHV1-58A0A0C4DH39 117 aa7.08□□□□□ -1.28
SPARC-202ENST00000520687 GAGE7O76087 117 aa7.08□□□□□ -1.28
SPARC-202ENST00000520687 GAGE12FP0CL80 117 aa7.08□□□□□ -1.28
SPARC-202ENST00000520687 GAGE12GP0CL81 117 aa7.08□□□□□ -1.28
SPARC-202ENST00000520687 GAGE12IP0CL82 117 aa7.08□□□□□ -1.28
SPARC-202ENST00000520687 UBE2D1P51668 147 aa7.08□□□□□ -1.28
SPARC-202ENST00000520687 HERVK_113P63121 156 aa7.08□□□□□ -1.28
SPARC-202ENST00000520687 TMEM101Q96IK0 257 aa7.08□□□□□ -1.28
SPARC-202ENST00000520687 TMEM243Q9BU79 118 aa7.08□□□□□ -1.28
SPARC-202ENST00000520687 WFDC10AQ9H1F0 79 aa7.08□□□□□ -1.28
SPARC-202ENST00000520687 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.08□□□□□ -1.28
SPARC-202ENST00000520687 TEX48A0A1B0GUV7 120 aa7.08□□□□□ -1.28
SPARC-202ENST00000520687 IGKV2-29A2NJV5 120 aaPredicted RBP7.08□□□□□ -1.28
SPARC-202ENST00000520687 LYRM9A8MSI8 78 aa7.08□□□□□ -1.28
SPARC-202ENST00000520687 LYRM7Q5U5X0 104 aa7.08□□□□□ -1.28
SPARC-202ENST00000520687 SBSPONQ8IVN8 264 aa7.08□□□□□ -1.28
SPARC-202ENST00000520687 Q9UF83 564 aa7.08□□□□□ -1.28
SPARC-202ENST00000520687 PRO0461Q9UI25 63 aa7.08□□□□□ -1.28
SPARC-202ENST00000520687 IGHV3-38A0A0C4DH36 116 aa7.07□□□□□ -1.28
SPARC-202ENST00000520687 GAGE12JA6NER3 117 aa7.07□□□□□ -1.28
SPARC-202ENST00000520687 UBE2L6O14933 153 aa7.07□□□□□ -1.28
SPARC-202ENST00000520687 TIMM17BO60830 172 aa7.07□□□□□ -1.28
SPARC-202ENST00000520687 IGHV3-30-3P0DP02 117 aa7.07□□□□□ -1.28
SPARC-202ENST00000520687 GAGE4Q13068 117 aa7.07□□□□□ -1.28
SPARC-202ENST00000520687 GAGE5Q13069 117 aa7.07□□□□□ -1.28
SPARC-202ENST00000520687 GAGE13Q4V321 117 aa7.07□□□□□ -1.28
SPARC-202ENST00000520687 Q6ZUT4 128 aa7.07□□□□□ -1.28
SPARC-202ENST00000520687 VSIG2Q96IQ7 327 aa7.07□□□□□ -1.28
SPARC-202ENST00000520687 TSPEAR-AS2P59090 65 aa7.06□□□□□ -1.28
SPARC-202ENST00000520687 RPL24P83731 157 aaKnown RBP7.06□□□□□ -1.28
SPARC-202ENST00000520687 FHL2Q14192 279 aa7.06□□□□□ -1.28
SPARC-202ENST00000520687 RNF183Q96D59 192 aa7.06□□□□□ -1.28
SPARC-202ENST00000520687 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.05□□□□□ -1.28
SPARC-202ENST00000520687 J3QR89 54 aa7.05□□□□□ -1.28
SPARC-202ENST00000520687 IGHV3-30P01768 117 aa7.05□□□□□ -1.28
SPARC-202ENST00000520687 IGHV3-30-5P0DP03 117 aa7.05□□□□□ -1.28
SPARC-202ENST00000520687 CEMP1Q6PRD7 247 aaPredicted RBP7.05□□□□□ -1.28
SPARC-202ENST00000520687 NTM-AS1Q6ZSK4 140 aa7.05□□□□□ -1.28
SPARC-202ENST00000520687 SPATA25Q9BR10 227 aa7.05□□□□□ -1.28
SPARC-202ENST00000520687 CDC42SE2Q9NRR3 84 aa7.05□□□□□ -1.28
SPARC-202ENST00000520687 EPPK1P58107 5090 aaKnown RBP7.05□□□□□ -1.28
SPARC-202ENST00000520687 A0A0J9YXY3 114 aa7.04□□□□□ -1.28
SPARC-202ENST00000520687 LINC00694P0DN24 101 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms