RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 GIG44P09565 113 aaPredicted RBP4.05□□□□□ -1.76
CTNNA1-220ENST00000520260 MED14OSP0DP75 135 aa4.05□□□□□ -1.76
CTNNA1-220ENST00000520260 PLNP26678 52 aa4.05□□□□□ -1.76
CTNNA1-220ENST00000520260 FOXI1Q12951 378 aa4.05□□□□□ -1.76
CTNNA1-220ENST00000520260 ETDBQ3ZM63 59 aa4.05□□□□□ -1.76
CTNNA1-220ENST00000520260 CASC10Q5T4H9 136 aa4.05□□□□□ -1.76
CTNNA1-220ENST00000520260 LYRM7Q5U5X0 104 aa4.05□□□□□ -1.76
CTNNA1-220ENST00000520260 CFAP126Q5VTH2 177 aa4.05□□□□□ -1.76
CTNNA1-220ENST00000520260 UBE2DNLQ8IWF7 75 aa4.05□□□□□ -1.76
CTNNA1-220ENST00000520260 ZFAND2AQ8N6M9 145 aa4.05□□□□□ -1.76
CTNNA1-220ENST00000520260 MAPKAPK5-AS1Q8N8E1 139 aa4.05□□□□□ -1.76
CTNNA1-220ENST00000520260 TPPP3Q9BW30 176 aa4.05□□□□□ -1.76
CTNNA1-220ENST00000520260 CDIP1Q9H305 208 aa4.05□□□□□ -1.76
CTNNA1-220ENST00000520260 NOP10Q9NPE3 64 aaKnown RBP4.05□□□□□ -1.76
CTNNA1-220ENST00000520260 PHLDA3Q9Y5J5 127 aa4.05□□□□□ -1.76
CTNNA1-220ENST00000520260 STAB2Q8WWQ8 2551 aa4.04□□□□□ -1.76
CTNNA1-220ENST00000520260 F5H768 121 aa4.04□□□□□ -1.76
CTNNA1-220ENST00000520260 APOMO95445 188 aa4.04□□□□□ -1.76
CTNNA1-220ENST00000520260 HTN3P15516 51 aa4.04□□□□□ -1.76
CTNNA1-220ENST00000520260 CCL18P55774 89 aa4.04□□□□□ -1.76
CTNNA1-220ENST00000520260 DEFB1P60022 68 aa4.04□□□□□ -1.76
CTNNA1-220ENST00000520260 NANOS2P60321 138 aaKnown RBP4.04□□□□□ -1.76
CTNNA1-220ENST00000520260 ZNF876PQ49A33 203 aa4.04□□□□□ -1.76
CTNNA1-220ENST00000520260 ZNF575Q86XF7 245 aa4.04□□□□□ -1.76
CTNNA1-220ENST00000520260 PPDPFLQ8WWR9 84 aa4.04□□□□□ -1.76
CTNNA1-220ENST00000520260 PTH2Q96A98 100 aa4.04□□□□□ -1.76
CTNNA1-220ENST00000520260 PRADC1Q9BSG0 188 aa4.04□□□□□ -1.76
CTNNA1-220ENST00000520260 ERG28Q9UKR5 140 aa4.04□□□□□ -1.76
CTNNA1-220ENST00000520260 IGHV4-4A0A075B6R2 117 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 TMSB15BA0A087X1C1 80 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 TRAV4A0A0B4J268 109 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 MYMXA0A1B0GTQ4 84 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 F8VRH5 84 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 H7C1H1 209 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 K7EMI3 77 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 DEFB4AO15263 64 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 GAGE7O76087 117 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 SPINK8P0C7L1 97 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 GAGE12FP0CL80 117 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 GAGE12GP0CL81 117 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 GAGE12IP0CL82 117 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 RBMY1A1P0DJD3 496 aaKnown RBP4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 RBMY1CP0DJD4 496 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 UBE2D1P51668 147 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 UBE2D3P61077 147 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 UBE2D2P62837 147 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 LAGE3Q14657 143 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 RBMY1FQ15415 496 aaKnown RBP4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 SPANXN1Q5VSR9 72 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 ZFAND6Q6FIF0 208 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 Q6ZTC4 211 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 Q6ZUT4 128 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 HIST1H4GQ99525 98 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 C20orf78Q9BR46 151 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 TTTY13Q9BZ97 58 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 MRPL35Q9NZE8 188 aaKnown RBP4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 PRO0255Q9UI72 69 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 ICOSQ9Y6W8 199 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 TGP01266 2768 aa4.03□□□□□ -1.76
CTNNA1-220ENST00000520260 CMYA5Q8N3K9 4069 aa4.02□□□□□ -1.77
CTNNA1-220ENST00000520260 TRBV20-1A0A075B6N2 111 aa4.02□□□□□ -1.77
CTNNA1-220ENST00000520260 IGHV3-16A0A0C4DH30 117 aa4.02□□□□□ -1.77
CTNNA1-220ENST00000520260 TMEM262E9PQX1 116 aa4.02□□□□□ -1.77
CTNNA1-220ENST00000520260 ZNF80P51504 273 aaPredicted RBP4.02□□□□□ -1.77
CTNNA1-220ENST00000520260 RHOHQ15669 191 aa4.02□□□□□ -1.77
CTNNA1-220ENST00000520260 MRPL23Q16540 153 aaKnown RBP4.02□□□□□ -1.77
CTNNA1-220ENST00000520260 TTC32Q5I0X7 151 aa4.02□□□□□ -1.77
CTNNA1-220ENST00000520260 ZFP2Q6ZN57 461 aa4.02□□□□□ -1.77
CTNNA1-220ENST00000520260 TEN1Q86WV5 123 aa4.02□□□□□ -1.77
CTNNA1-220ENST00000520260 NRACQ8N912 160 aa4.02□□□□□ -1.77
CTNNA1-220ENST00000520260 RASL10AQ92737 203 aa4.02□□□□□ -1.77
CTNNA1-220ENST00000520260 LINC01600Q96MT4 127 aa4.02□□□□□ -1.77
CTNNA1-220ENST00000520260 SPANXA1Q9NS26 97 aa4.02□□□□□ -1.77
CTNNA1-220ENST00000520260 LINC01549A6NIU2 74 aa4.01□□□□□ -1.77
CTNNA1-220ENST00000520260 GAS8-AS1O95177 125 aa4.01□□□□□ -1.77
CTNNA1-220ENST00000520260 MT-ATP8P03928 68 aa4.01□□□□□ -1.77
CTNNA1-220ENST00000520260 XGP55808 180 aa4.01□□□□□ -1.77
CTNNA1-220ENST00000520260 ORMDL2Q53FV1 153 aa4.01□□□□□ -1.77
CTNNA1-220ENST00000520260 CARD19Q96LW7 228 aa4.01□□□□□ -1.77
CTNNA1-220ENST00000520260 MSRB1Q9NZV6 116 aa4.01□□□□□ -1.77
CTNNA1-220ENST00000520260 DNAH3Q8TD57 4116 aa4.01□□□□□ -1.77
CTNNA1-220ENST00000520260 TENM3Q9P273 2699 aa4.01□□□□□ -1.77
CTNNA1-220ENST00000520260 NBEAL2Q6ZNJ1 2754 aa4□□□□□ -1.77
CTNNA1-220ENST00000520260 TRBV6-4A0A1B0GX49 114 aa4□□□□□ -1.77
CTNNA1-220ENST00000520260 H3BVH4 76 aa4□□□□□ -1.77
CTNNA1-220ENST00000520260 M0R381 172 aa4□□□□□ -1.77
CTNNA1-220ENST00000520260 LY6G6CO95867 125 aa4□□□□□ -1.77
CTNNA1-220ENST00000520260 PPP1R17O96001 155 aa4□□□□□ -1.77
CTNNA1-220ENST00000520260 GATA1P15976 413 aaPredicted RBP4□□□□□ -1.77
CTNNA1-220ENST00000520260 GAGE5Q13069 117 aa4□□□□□ -1.77
CTNNA1-220ENST00000520260 GAGE6Q13070 117 aa4□□□□□ -1.77
CTNNA1-220ENST00000520260 PAPPA-AS1Q5QFB9 102 aa4□□□□□ -1.77
CTNNA1-220ENST00000520260 Q6Q795 121 aa4□□□□□ -1.77
CTNNA1-220ENST00000520260 Q6ZTI0 123 aa4□□□□□ -1.77
CTNNA1-220ENST00000520260 NFE4Q86UQ8 179 aa4□□□□□ -1.77
CTNNA1-220ENST00000520260 LINC00612Q8N6U2 182 aa4□□□□□ -1.77
CTNNA1-220ENST00000520260 C11orf72Q8NBR9 251 aa4□□□□□ -1.77
CTNNA1-220ENST00000520260 NEXN-AS1Q8NBZ9 246 aa4□□□□□ -1.77
CTNNA1-220ENST00000520260 TOMM6Q96B49 74 aa4□□□□□ -1.77
CTNNA1-220ENST00000520260 SMIM2Q9BVW6 85 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms