RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 NDUFA6P56556 154 aa5.57□□□□□ -1.52
TRIM35-202ENST00000519219 AP1S3Q96PC3 154 aa5.57□□□□□ -1.52
TRIM35-202ENST00000519219 CHCHD5Q9BSY4 110 aa5.57□□□□□ -1.52
TRIM35-202ENST00000519219 HIST1H2BKO60814 126 aa5.56□□□□□ -1.52
TRIM35-202ENST00000519219 SLPIP03973 132 aa5.56□□□□□ -1.52
TRIM35-202ENST00000519219 HIST1H2BJP06899 126 aa5.56□□□□□ -1.52
TRIM35-202ENST00000519219 HIST1H2BOP23527 126 aa5.56□□□□□ -1.52
TRIM35-202ENST00000519219 HIST1H2BBP33778 126 aa5.56□□□□□ -1.52
TRIM35-202ENST00000519219 HIST1H2BDP58876 126 aa5.56□□□□□ -1.52
TRIM35-202ENST00000519219 HIST1H2BCP62807 126 aa5.56□□□□□ -1.52
TRIM35-202ENST00000519219 RBX1P62877 108 aa5.56□□□□□ -1.52
TRIM35-202ENST00000519219 GAGE6Q13070 117 aa5.56□□□□□ -1.52
TRIM35-202ENST00000519219 ZNF56Q15929 161 aa5.56□□□□□ -1.52
TRIM35-202ENST00000519219 HIST2H2BEQ16778 126 aa5.56□□□□□ -1.52
TRIM35-202ENST00000519219 KIAA1644Q3SXP7 199 aa5.56□□□□□ -1.52
TRIM35-202ENST00000519219 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.56□□□□□ -1.52
TRIM35-202ENST00000519219 LINC00269Q8N2A0 174 aa5.56□□□□□ -1.52
TRIM35-202ENST00000519219 HIST1H2BHQ93079 126 aa5.56□□□□□ -1.52
TRIM35-202ENST00000519219 HIST1H2BNQ99877 126 aa5.56□□□□□ -1.52
TRIM35-202ENST00000519219 HIST1H2BMQ99879 126 aa5.56□□□□□ -1.52
TRIM35-202ENST00000519219 PRR34Q9NV39 138 aa5.56□□□□□ -1.52
TRIM35-202ENST00000519219 IGLV10-54A0A075B6I4 117 aa5.55□□□□□ -1.52
TRIM35-202ENST00000519219 MGPP08493 103 aa5.55□□□□□ -1.52
TRIM35-202ENST00000519219 CIRBPQ14011 172 aaKnown RBP5.55□□□□□ -1.52
TRIM35-202ENST00000519219 MIAQ16674 131 aa5.55□□□□□ -1.52
TRIM35-202ENST00000519219 DGAT2L7PQ6IED9 249 aa5.55□□□□□ -1.52
TRIM35-202ENST00000519219 BAGE3Q86Y29 109 aa5.55□□□□□ -1.52
TRIM35-202ENST00000519219 CNFNQ9BYD5 112 aa5.55□□□□□ -1.52
TRIM35-202ENST00000519219 TMEM191AQ9H0A3 160 aa5.55□□□□□ -1.52
TRIM35-202ENST00000519219 S100A2P29034 98 aa5.54□□□□□ -1.52
TRIM35-202ENST00000519219 CKS2P33552 79 aa5.54□□□□□ -1.52
TRIM35-202ENST00000519219 Q6ZRU5 148 aa5.54□□□□□ -1.52
TRIM35-202ENST00000519219 AMN1Q8IY45 258 aa5.54□□□□□ -1.52
TRIM35-202ENST00000519219 GATD1Q8NB37 220 aa5.54□□□□□ -1.52
TRIM35-202ENST00000519219 DPH3P1Q9H4G8 78 aa5.54□□□□□ -1.52
TRIM35-202ENST00000519219 KIF25-AS1Q9Y6Z4 181 aa5.54□□□□□ -1.52
TRIM35-202ENST00000519219 IGLV4-60A0A075B6I1 120 aa5.53□□□□□ -1.52
TRIM35-202ENST00000519219 A0A087WYN8 130 aa5.53□□□□□ -1.52
TRIM35-202ENST00000519219 KRTAP9-6A0A140TA67 174 aa5.53□□□□□ -1.52
TRIM35-202ENST00000519219 D6R8Y8 96 aa5.53□□□□□ -1.52
TRIM35-202ENST00000519219 SNRPEP62304 92 aaKnown RBP5.53□□□□□ -1.52
TRIM35-202ENST00000519219 FAM104BQ5XKR9 115 aa5.53□□□□□ -1.52
TRIM35-202ENST00000519219 ORMDL3Q8N138 153 aa5.53□□□□□ -1.52
TRIM35-202ENST00000519219 hDV102S1A0JD36 115 aa5.52□□□□□ -1.53
TRIM35-202ENST00000519219 F5H697 171 aa5.52□□□□□ -1.53
TRIM35-202ENST00000519219 PHOX2AO14813 284 aa5.52□□□□□ -1.53
TRIM35-202ENST00000519219 NCR2O95944 276 aa5.52□□□□□ -1.53
TRIM35-202ENST00000519219 PPBPP02775 128 aa5.52□□□□□ -1.53
TRIM35-202ENST00000519219 CNBPP62633 177 aaKnown RBP5.52□□□□□ -1.53
TRIM35-202ENST00000519219 REG3AQ06141 175 aa5.52□□□□□ -1.53
TRIM35-202ENST00000519219 MRPL51Q4U2R6 128 aaKnown RBP5.52□□□□□ -1.53
TRIM35-202ENST00000519219 PDZD11Q5EBL8 140 aa5.52□□□□□ -1.53
TRIM35-202ENST00000519219 RNASEKQ6P5S7 137 aaKnown RBP5.52□□□□□ -1.53
TRIM35-202ENST00000519219 C20orf203Q8NBC4 194 aa5.52□□□□□ -1.53
TRIM35-202ENST00000519219 SPACA4Q8TDM5 124 aa5.52□□□□□ -1.53
TRIM35-202ENST00000519219 MRAP2Q96G30 205 aa5.52□□□□□ -1.53
TRIM35-202ENST00000519219 PRELID3AQ96N28 172 aa5.52□□□□□ -1.53
TRIM35-202ENST00000519219 ALKBH7Q9BT30 221 aaPredicted RBP5.52□□□□□ -1.53
TRIM35-202ENST00000519219 SMKR1H3BMG3 65 aa5.51□□□□□ -1.53
TRIM35-202ENST00000519219 RAB4AP20338 218 aa5.51□□□□□ -1.53
TRIM35-202ENST00000519219 IQCJQ1A5X6 159 aa5.51□□□□□ -1.53
TRIM35-202ENST00000519219 MAP1LC3AQ9H492 121 aa5.51□□□□□ -1.53
TRIM35-202ENST00000519219 TRBV25-1A0A075B6N4 114 aa5.5□□□□□ -1.53
TRIM35-202ENST00000519219 IGHV3-64A0A075B6Q5 118 aa5.5□□□□□ -1.53
TRIM35-202ENST00000519219 PPP1R17O96001 155 aa5.5□□□□□ -1.53
TRIM35-202ENST00000519219 AKR1D1P51857 326 aa5.5□□□□□ -1.53
TRIM35-202ENST00000519219 SUMO4Q6EEV6 95 aa5.5□□□□□ -1.53
TRIM35-202ENST00000519219 FA2HQ7L5A8 372 aa5.5□□□□□ -1.53
TRIM35-202ENST00000519219 C15orf56Q8N910 161 aa5.5□□□□□ -1.53
TRIM35-202ENST00000519219 PRSS3P2Q8NHM4 247 aa5.5□□□□□ -1.53
TRIM35-202ENST00000519219 C18orf32Q8TCD1 76 aa5.5□□□□□ -1.53
TRIM35-202ENST00000519219 KRTAP9-2Q9BYQ4 174 aa5.5□□□□□ -1.53
TRIM35-202ENST00000519219 PLAC8Q9NZF1 115 aa5.5□□□□□ -1.53
TRIM35-202ENST00000519219 LAMTOR2Q9Y2Q5 125 aa5.5□□□□□ -1.53
TRIM35-202ENST00000519219 TRAV26-2A0A0B4J265 109 aa5.49□□□□□ -1.53
TRIM35-202ENST00000519219 IGHV1-24A0A0C4DH33 117 aa5.49□□□□□ -1.53
TRIM35-202ENST00000519219 LOC389332A0A1B0GUA5 103 aa5.49□□□□□ -1.53
TRIM35-202ENST00000519219 C5orf52A6NGY3 159 aa5.49□□□□□ -1.53
TRIM35-202ENST00000519219 H7C1H1 209 aa5.49□□□□□ -1.53
TRIM35-202ENST00000519219 M0QY20 66 aa5.49□□□□□ -1.53
TRIM35-202ENST00000519219 HSBP1O75506 76 aa5.49□□□□□ -1.53
TRIM35-202ENST00000519219 SERF1AO75920 110 aa5.49□□□□□ -1.53
TRIM35-202ENST00000519219 PMCHP20382 165 aa5.49□□□□□ -1.53
TRIM35-202ENST00000519219 PKIAP61925 76 aa5.49□□□□□ -1.53
TRIM35-202ENST00000519219 TMEM18Q96B42 140 aa5.49□□□□□ -1.53
TRIM35-202ENST00000519219 DPH3Q96FX2 82 aa5.49□□□□□ -1.53
TRIM35-202ENST00000519219 RNF185Q96GF1 192 aa5.49□□□□□ -1.53
TRIM35-202ENST00000519219 TNFRSF6BO95407 300 aa5.48□□□□□ -1.53
TRIM35-202ENST00000519219 NPYP01303 97 aa5.48□□□□□ -1.53
TRIM35-202ENST00000519219 FABP4P15090 132 aa5.48□□□□□ -1.53
TRIM35-202ENST00000519219 COX6A2Q02221 97 aa5.48□□□□□ -1.53
TRIM35-202ENST00000519219 HIGD2BQ4VC39 106 aa5.48□□□□□ -1.53
TRIM35-202ENST00000519219 TMEM97Q5BJF2 176 aa5.48□□□□□ -1.53
TRIM35-202ENST00000519219 COA6Q5JTJ3 125 aaKnown RBP5.48□□□□□ -1.53
TRIM35-202ENST00000519219 HIST3H2BBQ8N257 126 aa5.48□□□□□ -1.53
TRIM35-202ENST00000519219 CHCHD1Q96BP2 118 aaKnown RBP5.48□□□□□ -1.53
TRIM35-202ENST00000519219 IGKV2-24A0A0C4DH68 120 aa5.47□□□□□ -1.53
TRIM35-202ENST00000519219 LOC105371267A0A1B0GV96 52 aa5.47□□□□□ -1.53
TRIM35-202ENST00000519219 GAGE12HA6NDE8 117 aa5.47□□□□□ -1.53
TRIM35-202ENST00000519219 AMTP48728 403 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms