RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 UBE2E2Q96LR5 201 aa7.45□□□□□ -1.22
SH2D4A-204ENST00000519207 ANK3Q12955 4377 aaKnown RBP7.44□□□□□ -1.22
SH2D4A-204ENST00000519207 TRAV25A0A0B4J276 109 aa7.44□□□□□ -1.22
SH2D4A-204ENST00000519207 TRBV6-5A0A0K0K1A5 114 aa7.44□□□□□ -1.22
SH2D4A-204ENST00000519207 A4D1N5 150 aa7.44□□□□□ -1.22
SH2D4A-204ENST00000519207 SUMO4Q6EEV6 95 aa7.44□□□□□ -1.22
SH2D4A-204ENST00000519207 Q6YL49 198 aa7.44□□□□□ -1.22
SH2D4A-204ENST00000519207 C3orf22Q8N5N4 141 aa7.44□□□□□ -1.22
SH2D4A-204ENST00000519207 LINC00526Q96FQ7 95 aa7.44□□□□□ -1.22
SH2D4A-204ENST00000519207 SYNJ2BPP57105 145 aa7.44□□□□□ -1.22
SH2D4A-204ENST00000519207 HERVK_113P61574 105 aa7.44□□□□□ -1.22
SH2D4A-204ENST00000519207 SPATA3Q8NHX4 192 aa7.44□□□□□ -1.22
SH2D4A-204ENST00000519207 ZNF702PQ9H963 129 aa7.44□□□□□ -1.22
SH2D4A-204ENST00000519207 IGHV1OR15-1A0A075B7D0 117 aa7.43□□□□□ -1.22
SH2D4A-204ENST00000519207 TRBV27A0A0K0K1C4 114 aa7.43□□□□□ -1.22
SH2D4A-204ENST00000519207 IGIPA6NJ69 53 aa7.43□□□□□ -1.22
SH2D4A-204ENST00000519207 UQCRQO14949 82 aa7.43□□□□□ -1.22
SH2D4A-204ENST00000519207 ATP5G1P05496 136 aa7.43□□□□□ -1.22
SH2D4A-204ENST00000519207 TMEM170BQ5T4T1 132 aa7.43□□□□□ -1.22
SH2D4A-204ENST00000519207 TMEM141Q96I45 108 aa7.43□□□□□ -1.22
SH2D4A-204ENST00000519207 JPT2Q9H910 190 aa7.43□□□□□ -1.22
SH2D4A-204ENST00000519207 A0A087WWL8 130 aa7.42□□□□□ -1.22
SH2D4A-204ENST00000519207 F5H697 171 aa7.42□□□□□ -1.22
SH2D4A-204ENST00000519207 H7C423 109 aa7.42□□□□□ -1.22
SH2D4A-204ENST00000519207 J3KT08 172 aa7.42□□□□□ -1.22
SH2D4A-204ENST00000519207 HOXD3P31249 432 aaPredicted RBP7.42□□□□□ -1.22
SH2D4A-204ENST00000519207 TMEM101Q96IK0 257 aa7.42□□□□□ -1.22
SH2D4A-204ENST00000519207 TIMM17AQ99595 171 aa7.42□□□□□ -1.22
SH2D4A-204ENST00000519207 CITED2Q99967 270 aaPredicted RBP7.42□□□□□ -1.22
SH2D4A-204ENST00000519207 SDHAF1A6NFY7 115 aa7.42□□□□□ -1.22
SH2D4A-204ENST00000519207 IGHV4-31P0DP07 118 aa7.42□□□□□ -1.22
SH2D4A-204ENST00000519207 TP53TG1Q9Y2A0 90 aa7.42□□□□□ -1.22
SH2D4A-204ENST00000519207 SORL1Q92673 2214 aa7.41□□□□□ -1.22
SH2D4A-204ENST00000519207 TRAV12-2A0A075B6T6 113 aa7.41□□□□□ -1.22
SH2D4A-204ENST00000519207 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.41□□□□□ -1.22
SH2D4A-204ENST00000519207 PMVKQ15126 192 aa7.41□□□□□ -1.22
SH2D4A-204ENST00000519207 FAM19A5Q7Z5A7 132 aaPredicted RBP7.41□□□□□ -1.22
SH2D4A-204ENST00000519207 TRGV11A0A075B6L2 103 aa7.4□□□□□ -1.22
SH2D4A-204ENST00000519207 TMEM223A0PJW6 202 aa7.4□□□□□ -1.22
SH2D4A-204ENST00000519207 J3QQQ9 107 aa7.4□□□□□ -1.22
SH2D4A-204ENST00000519207 M0QY20 66 aa7.4□□□□□ -1.22
SH2D4A-204ENST00000519207 TRIAP1O43715 76 aa7.4□□□□□ -1.22
SH2D4A-204ENST00000519207 IGKV3-20P01619 116 aa7.4□□□□□ -1.22
SH2D4A-204ENST00000519207 HERVK_113P63121 156 aa7.4□□□□□ -1.22
SH2D4A-204ENST00000519207 RHOHQ15669 191 aa7.4□□□□□ -1.22
SH2D4A-204ENST00000519207 SPINK13Q1W4C9 94 aa7.4□□□□□ -1.22
SH2D4A-204ENST00000519207 ZNF876PQ49A33 203 aa7.4□□□□□ -1.22
SH2D4A-204ENST00000519207 Q8N2B8 174 aa7.4□□□□□ -1.22
SH2D4A-204ENST00000519207 ZNF256Q9Y2P7 627 aaPredicted RBP7.4□□□□□ -1.22
SH2D4A-204ENST00000519207 LOC107984640A0A0U1RRK4 108 aa7.4□□□□□ -1.23
SH2D4A-204ENST00000519207 ACYP1P07311 99 aa7.4□□□□□ -1.23
SH2D4A-204ENST00000519207 ZNF56Q15929 161 aa7.4□□□□□ -1.23
SH2D4A-204ENST00000519207 ZNRF2Q8NHG8 242 aa7.4□□□□□ -1.23
SH2D4A-204ENST00000519207 FAM236AA0A1B0GUQ0 79 aa7.39□□□□□ -1.23
SH2D4A-204ENST00000519207 FAM236BA0A1B0GV22 79 aa7.39□□□□□ -1.23
SH2D4A-204ENST00000519207 A8MTW9 85 aa7.39□□□□□ -1.23
SH2D4A-204ENST00000519207 CRYGAP11844 174 aa7.39□□□□□ -1.23
SH2D4A-204ENST00000519207 NSUN5P1Q3KNT7 163 aa7.39□□□□□ -1.23
SH2D4A-204ENST00000519207 FAM74A4Q5TZK3 123 aa7.39□□□□□ -1.23
SH2D4A-204ENST00000519207 C2orf82Q6UX34 121 aa7.39□□□□□ -1.23
SH2D4A-204ENST00000519207 C3orf56Q8N813 242 aa7.39□□□□□ -1.23
SH2D4A-204ENST00000519207 C2orf48Q96LS8 159 aa7.39□□□□□ -1.23
SH2D4A-204ENST00000519207 LEPROTO15243 131 aa7.39□□□□□ -1.23
SH2D4A-204ENST00000519207 HIST1H4AP62805 103 aaKnown RBP7.39□□□□□ -1.23
SH2D4A-204ENST00000519207 RPL39P62891 51 aaKnown RBP7.39□□□□□ -1.23
SH2D4A-204ENST00000519207 C9orf153Q5TBE3 101 aa7.39□□□□□ -1.23
SH2D4A-204ENST00000519207 CEMP1Q6PRD7 247 aaPredicted RBP7.39□□□□□ -1.23
SH2D4A-204ENST00000519207 C5orf38Q86SI9 138 aa7.39□□□□□ -1.23
SH2D4A-204ENST00000519207 MUSTN1Q8IVN3 82 aa7.39□□□□□ -1.23
SH2D4A-204ENST00000519207 EDA2RQ9HAV5 297 aa7.39□□□□□ -1.23
SH2D4A-204ENST00000519207 LST1O00453 97 aa7.38□□□□□ -1.23
SH2D4A-204ENST00000519207 DUX5Q96PT3 197 aa7.38□□□□□ -1.23
SH2D4A-204ENST00000519207 LITAFQ99732 161 aa7.38□□□□□ -1.23
SH2D4A-204ENST00000519207 CXCL5P42830 114 aa7.37□□□□□ -1.23
SH2D4A-204ENST00000519207 ZNF22P17026 224 aaPredicted RBP7.37□□□□□ -1.23
SH2D4A-204ENST00000519207 PIK3CD-AS1Q5SR53 167 aa7.37□□□□□ -1.23
SH2D4A-204ENST00000519207 PEMTQ9UBM1 199 aa7.37□□□□□ -1.23
SH2D4A-204ENST00000519207 NBEAL1Q6ZS30 2694 aa7.36□□□□□ -1.23
SH2D4A-204ENST00000519207 I3L3M4 83 aa7.36□□□□□ -1.23
SH2D4A-204ENST00000519207 COX7CP15954 63 aa7.36□□□□□ -1.23
SH2D4A-204ENST00000519207 SLURP1P55000 103 aa7.36□□□□□ -1.23
SH2D4A-204ENST00000519207 LINC00643Q86TS7 51 aa7.36□□□□□ -1.23
SH2D4A-204ENST00000519207 C4orf3Q8WVX3 66 aa7.36□□□□□ -1.23
SH2D4A-204ENST00000519207 DUX3Q96PT4 197 aa7.36□□□□□ -1.23
SH2D4A-204ENST00000519207 ICOSQ9Y6W8 199 aa7.36□□□□□ -1.23
SH2D4A-204ENST00000519207 DEFB131AP59861 70 aa7.35□□□□□ -1.23
SH2D4A-204ENST00000519207 C20orf203Q8NBC4 194 aa7.35□□□□□ -1.23
SH2D4A-204ENST00000519207 SMCR5Q8TEV8 140 aa7.35□□□□□ -1.23
SH2D4A-204ENST00000519207 KNCNA6PVL3 124 aa7.35□□□□□ -1.23
SH2D4A-204ENST00000519207 RBMY1A1P0DJD3 496 aaKnown RBP7.35□□□□□ -1.23
SH2D4A-204ENST00000519207 RBMY1CP0DJD4 496 aa7.35□□□□□ -1.23
SH2D4A-204ENST00000519207 LGALS3P17931 250 aaKnown RBP7.35□□□□□ -1.23
SH2D4A-204ENST00000519207 RBMY1FQ15415 496 aaKnown RBP7.35□□□□□ -1.23
SH2D4A-204ENST00000519207 OR13C6PQ8NH95 151 aa7.35□□□□□ -1.23
SH2D4A-204ENST00000519207 EMP1P54849 157 aa7.34□□□□□ -1.23
SH2D4A-204ENST00000519207 C18orf65Q6ZTR6 163 aa7.34□□□□□ -1.23
SH2D4A-204ENST00000519207 TMEM86BQ8N661 226 aa7.34□□□□□ -1.23
SH2D4A-204ENST00000519207 A0A0J9YXY3 114 aa7.33□□□□□ -1.24
SH2D4A-204ENST00000519207 DEFB136Q30KP8 78 aa7.33□□□□□ -1.24
SH2D4A-204ENST00000519207 DEFB104AQ8WTQ1 72 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms