RNA–Protein interactions for RNA: ENST00000517875.5

LRRCC1-203, Transcript of leucine rich repeat and coiled-coil centrosomal protein 1, humanhuman

TSL 1 (best)

Gene LRRCC1, Length 2,385 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRCC1-203ENST00000517875 A0A0J9YXV3 536 aa12.71□□□□□ -0.37
LRRCC1-203ENST00000517875 VCYO14598 125 aa12.71□□□□□ -0.37
LRRCC1-203ENST00000517875 CCKP06307 115 aa12.71□□□□□ -0.37
LRRCC1-203ENST00000517875 TRBV7-6A0A0J9YX20 115 aa12.71□□□□□ -0.38
LRRCC1-203ENST00000517875 ABCA12Q86UK0 2595 aa12.7□□□□□ -0.38
LRRCC1-203ENST00000517875 PTPN13Q12923 2485 aa12.7□□□□□ -0.38
LRRCC1-203ENST00000517875 TRBV12-3P01733 135 aa12.7□□□□□ -0.38
LRRCC1-203ENST00000517875 VPS13CQ709C8 3753 aa12.7□□□□□ -0.38
LRRCC1-203ENST00000517875 POLQO75417 2590 aa12.7□□□□□ -0.38
LRRCC1-203ENST00000517875 TRAV23DV6A0A075B6W5 121 aa12.7□□□□□ -0.38
LRRCC1-203ENST00000517875 IGHV4OR15-8A0A075B7B6 117 aa12.7□□□□□ -0.38
LRRCC1-203ENST00000517875 A0A087WW49 117 aa12.7□□□□□ -0.38
LRRCC1-203ENST00000517875 TIMM17BO60830 172 aa12.7□□□□□ -0.38
LRRCC1-203ENST00000517875 HIST2H2BCQ6DN03 193 aa12.7□□□□□ -0.38
LRRCC1-203ENST00000517875 CCL19Q99731 98 aa12.7□□□□□ -0.38
LRRCC1-203ENST00000517875 C14orf132Q9NPU4 83 aa12.69□□□□□ -0.38
LRRCC1-203ENST00000517875 TRBV27A0A0K0K1C4 114 aa12.69□□□□□ -0.38
LRRCC1-203ENST00000517875 KLKP1Q107X0 134 aa12.69□□□□□ -0.38
LRRCC1-203ENST00000517875 IGHV1-8P0DP01 117 aa12.68□□□□□ -0.38
LRRCC1-203ENST00000517875 FAM218AQ96MZ4 157 aa12.68□□□□□ -0.38
LRRCC1-203ENST00000517875 PHLDA3Q9Y5J5 127 aa12.68□□□□□ -0.38
LRRCC1-203ENST00000517875 S4R3C0 116 aa12.68□□□□□ -0.38
LRRCC1-203ENST00000517875 NBPF19A0A087WUL8 3843 aa12.68□□□□□ -0.38
LRRCC1-203ENST00000517875 BUB1B-PAK6H3BSN5 160 aa12.67□□□□□ -0.38
LRRCC1-203ENST00000517875 Q96MF0 132 aa12.67□□□□□ -0.38
LRRCC1-203ENST00000517875 IGHV1-58A0A0C4DH39 117 aa12.67□□□□□ -0.38
LRRCC1-203ENST00000517875 C1orf158Q8N1D5 194 aa12.67□□□□□ -0.38
LRRCC1-203ENST00000517875 APCP25054 2843 aa12.67□□□□□ -0.38
LRRCC1-203ENST00000517875 KRTAP10-9P60411 292 aa12.66□□□□□ -0.38
LRRCC1-203ENST00000517875 RBM3P98179 157 aaKnown RBP12.66□□□□□ -0.38
LRRCC1-203ENST00000517875 CD164Q04900 197 aa12.66□□□□□ -0.38
LRRCC1-203ENST00000517875 ARHGAP32A7KAX9 2087 aa12.66□□□□□ -0.38
LRRCC1-203ENST00000517875 TMEM89A2RUT3 159 aa12.66□□□□□ -0.38
LRRCC1-203ENST00000517875 CFHR3Q02985 330 aa12.66□□□□□ -0.38
LRRCC1-203ENST00000517875 PRB3Q04118 309 aaPredicted RBP12.66□□□□□ -0.38
LRRCC1-203ENST00000517875 S100A4P26447 101 aaKnown RBP12.65□□□□□ -0.38
LRRCC1-203ENST00000517875 NDPQ00604 133 aa12.65□□□□□ -0.38
LRRCC1-203ENST00000517875 ZNF561-AS1K7EIQ3 104 aa12.64□□□□□ -0.39
LRRCC1-203ENST00000517875 C9orf47Q6ZRZ4 202 aa12.64□□□□□ -0.39
LRRCC1-203ENST00000517875 OBSCN-AS1Q96MR7 158 aa12.64□□□□□ -0.39
LRRCC1-203ENST00000517875 Q9HAA7 133 aa12.64□□□□□ -0.39
LRRCC1-203ENST00000517875 C9orf129Q5T035 196 aaKnown RBP12.64□□□□□ -0.39
LRRCC1-203ENST00000517875 ATP5EP2Q5VTU8 51 aa12.64□□□□□ -0.39
LRRCC1-203ENST00000517875 PRR15Q8IV56 129 aa12.64□□□□□ -0.39
LRRCC1-203ENST00000517875 LINC00315P59091 139 aa12.63□□□□□ -0.39
LRRCC1-203ENST00000517875 PRR9Q5T870 116 aa12.63□□□□□ -0.39
LRRCC1-203ENST00000517875 Q6ZRU5 148 aa12.63□□□□□ -0.39
LRRCC1-203ENST00000517875 TRAV7A0A075B6U4 112 aa12.62□□□□□ -0.39
LRRCC1-203ENST00000517875 SNRPD3P62318 126 aaKnown RBP12.62□□□□□ -0.39
LRRCC1-203ENST00000517875 KIF25-AS1Q9Y6Z4 181 aa12.62□□□□□ -0.39
LRRCC1-203ENST00000517875 ANKRD17O75179 2603 aaKnown RBP12.62□□□□□ -0.39
LRRCC1-203ENST00000517875 F8W735 103 aaPredicted RBP12.62□□□□□ -0.39
LRRCC1-203ENST00000517875 F8WEM9 126 aa12.62□□□□□ -0.39
LRRCC1-203ENST00000517875 IGLV4-3A0A075B6K6 122 aa12.61□□□□□ -0.39
LRRCC1-203ENST00000517875 MED14OSP0DP75 135 aa12.61□□□□□ -0.39
LRRCC1-203ENST00000517875 ATP5EP56381 51 aaPredicted RBP12.61□□□□□ -0.39
LRRCC1-203ENST00000517875 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.61□□□□□ -0.39
LRRCC1-203ENST00000517875 HECTD1Q9ULT8 2610 aa12.61□□□□□ -0.39
LRRCC1-203ENST00000517875 SUMO4Q6EEV6 95 aa12.61□□□□□ -0.39
LRRCC1-203ENST00000517875 CSMD1Q96PZ7 3565 aa12.6□□□□□ -0.39
LRRCC1-203ENST00000517875 BCE1O60756 84 aa12.6□□□□□ -0.39
LRRCC1-203ENST00000517875 IGLV1-47P01700 117 aa12.6□□□□□ -0.39
LRRCC1-203ENST00000517875 COX7A1P24310 79 aa12.6□□□□□ -0.39
LRRCC1-203ENST00000517875 WFDC9Q8NEX5 89 aa12.6□□□□□ -0.39
LRRCC1-203ENST00000517875 LINC00308Q8TCZ7 52 aa12.6□□□□□ -0.39
LRRCC1-203ENST00000517875 MED13LQ71F56 2210 aa12.6□□□□□ -0.39
LRRCC1-203ENST00000517875 S100A7L2Q5SY68 101 aa12.59□□□□□ -0.39
LRRCC1-203ENST00000517875 NAV2Q8IVL1 2488 aa12.59□□□□□ -0.39
LRRCC1-203ENST00000517875 BPESC1Q9GZL8 116 aa12.59□□□□□ -0.39
LRRCC1-203ENST00000517875 ITPR2Q14571 2701 aa12.59□□□□□ -0.39
LRRCC1-203ENST00000517875 VMO1Q7Z5L0 202 aa12.58□□□□□ -0.4
LRRCC1-203ENST00000517875 A8MZ25 164 aa12.58□□□□□ -0.4
LRRCC1-203ENST00000517875 TRBV6-5A0A0K0K1A5 114 aa12.57□□□□□ -0.4
LRRCC1-203ENST00000517875 RMI2Q96E14 147 aa12.57□□□□□ -0.4
LRRCC1-203ENST00000517875 MRPL53Q96EL3 112 aaKnown RBP12.57□□□□□ -0.4
LRRCC1-203ENST00000517875 UNC79Q9P2D8 2635 aa12.57□□□□□ -0.4
LRRCC1-203ENST00000517875 LY6G5BQ8NDX9 201 aa12.57□□□□□ -0.4
LRRCC1-203ENST00000517875 MPLKIPQ8TAP9 179 aa12.57□□□□□ -0.4
LRRCC1-203ENST00000517875 SNURFQ9Y675 71 aa12.57□□□□□ -0.4
LRRCC1-203ENST00000517875 PLAC8L1A1L4L8 177 aa12.56□□□□□ -0.4
LRRCC1-203ENST00000517875 SOCS3O14543 225 aa12.56□□□□□ -0.4
LRRCC1-203ENST00000517875 RNASE4P34096 147 aaKnown RBP12.56□□□□□ -0.4
LRRCC1-203ENST00000517875 C20orf203Q8NBC4 194 aa12.56□□□□□ -0.4
LRRCC1-203ENST00000517875 IGHV1-3A0A0C4DH29 117 aa12.56□□□□□ -0.4
LRRCC1-203ENST00000517875 TRBV10-3A0A0K0K1G6 114 aa12.56□□□□□ -0.4
LRRCC1-203ENST00000517875 ENHOQ6UWT2 76 aa12.56□□□□□ -0.4
LRRCC1-203ENST00000517875 TRAV21A0A0B4J279 112 aa12.55□□□□□ -0.4
LRRCC1-203ENST00000517875 NDUFC1O43677 76 aa12.55□□□□□ -0.4
LRRCC1-203ENST00000517875 HOXD3P31249 432 aaPredicted RBP12.55□□□□□ -0.4
LRRCC1-203ENST00000517875 OVOL2Q9BRP0 275 aa12.55□□□□□ -0.4
LRRCC1-203ENST00000517875 MOB4Q9Y3A3 225 aa12.55□□□□□ -0.4
LRRCC1-203ENST00000517875 IGHV3OR16-8A0A075B7F1 116 aa12.55□□□□□ -0.4
LRRCC1-203ENST00000517875 RNASE3P12724 160 aaKnown RBP12.55□□□□□ -0.4
LRRCC1-203ENST00000517875 SAA4P35542 130 aa12.55□□□□□ -0.4
LRRCC1-203ENST00000517875 LENEPQ9Y5L5 61 aa12.55□□□□□ -0.4
LRRCC1-203ENST00000517875 SVEP1Q4LDE5 3571 aa12.54□□□□□ -0.4
LRRCC1-203ENST00000517875 IGLV11-55A0A075B6I3 123 aa12.54□□□□□ -0.4
LRRCC1-203ENST00000517875 TRAV13-2A0A0B4J235 113 aa12.54□□□□□ -0.4
LRRCC1-203ENST00000517875 BLCAPP62952 87 aa12.54□□□□□ -0.4
LRRCC1-203ENST00000517875 FAM229BQ4G0N7 80 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms