RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 PRSS1P07477 247 aa4.78□□□□□ -1.64
TNFRSF11B-202ENST00000517352 REG3AQ06141 175 aa4.78□□□□□ -1.64
TNFRSF11B-202ENST00000517352 C9orf163Q8N9P6 203 aa4.78□□□□□ -1.64
TNFRSF11B-202ENST00000517352 NEXN-AS1Q8NBZ9 246 aa4.78□□□□□ -1.64
TNFRSF11B-202ENST00000517352 OR10AG1Q8NH19 301 aa4.78□□□□□ -1.64
TNFRSF11B-202ENST00000517352 FAM213BQ8TBF2 198 aa4.78□□□□□ -1.64
TNFRSF11B-202ENST00000517352 GTSF1Q8WW33 167 aa4.78□□□□□ -1.64
TNFRSF11B-202ENST00000517352 TMEM18Q96B42 140 aa4.78□□□□□ -1.64
TNFRSF11B-202ENST00000517352 SIGMAR1Q99720 223 aa4.78□□□□□ -1.64
TNFRSF11B-202ENST00000517352 MAP1LC3AQ9H492 121 aa4.78□□□□□ -1.64
TNFRSF11B-202ENST00000517352 HMCN2Q8NDA2 5059 aa4.77□□□□□ -1.65
TNFRSF11B-202ENST00000517352 TGIF2-C20orf24A0A0A6YYL0 155 aa4.77□□□□□ -1.65
TNFRSF11B-202ENST00000517352 DLEU1O43261 78 aa4.77□□□□□ -1.65
TNFRSF11B-202ENST00000517352 NPSP0C0P6 89 aa4.77□□□□□ -1.65
TNFRSF11B-202ENST00000517352 RPS20P60866 119 aaKnown RBP4.77□□□□□ -1.65
TNFRSF11B-202ENST00000517352 ZNF726P1Q15940 193 aa4.77□□□□□ -1.65
TNFRSF11B-202ENST00000517352 AMMECR1LQ6DCA0 310 aa4.77□□□□□ -1.65
TNFRSF11B-202ENST00000517352 KCNRGQ8N5I3 272 aa4.77□□□□□ -1.65
TNFRSF11B-202ENST00000517352 PRR26Q8N8Z3 221 aa4.77□□□□□ -1.65
TNFRSF11B-202ENST00000517352 TMEM243Q9BU79 118 aa4.77□□□□□ -1.65
TNFRSF11B-202ENST00000517352 KRTAP4-8A0A0G2JLE6 195 aa4.76□□□□□ -1.65
TNFRSF11B-202ENST00000517352 KANTRA0A1W2PQU2 76 aa4.76□□□□□ -1.65
TNFRSF11B-202ENST00000517352 UMAD1C9J7I0 102 aa4.76□□□□□ -1.65
TNFRSF11B-202ENST00000517352 PDE6DO43924 150 aa4.76□□□□□ -1.65
TNFRSF11B-202ENST00000517352 GZMBP10144 247 aa4.76□□□□□ -1.65
TNFRSF11B-202ENST00000517352 AMTP48728 403 aa4.76□□□□□ -1.65
TNFRSF11B-202ENST00000517352 EIF5AP63241 154 aaKnown RBP4.76□□□□□ -1.65
TNFRSF11B-202ENST00000517352 TMUB2Q71RG4 321 aa4.76□□□□□ -1.65
TNFRSF11B-202ENST00000517352 SMIM20Q8N5G0 67 aa4.76□□□□□ -1.65
TNFRSF11B-202ENST00000517352 CXCL1P09341 107 aa4.75□□□□□ -1.65
TNFRSF11B-202ENST00000517352 OR5AL1P0C617 328 aa4.75□□□□□ -1.65
TNFRSF11B-202ENST00000517352 TRGC1P0CF51 173 aa4.75□□□□□ -1.65
TNFRSF11B-202ENST00000517352 CACNG7P62955 275 aa4.75□□□□□ -1.65
TNFRSF11B-202ENST00000517352 CD164Q04900 197 aa4.75□□□□□ -1.65
TNFRSF11B-202ENST00000517352 Q5BKY6 102 aa4.75□□□□□ -1.65
TNFRSF11B-202ENST00000517352 Q6ZRU5 148 aa4.75□□□□□ -1.65
TNFRSF11B-202ENST00000517352 LINC01561Q8N1V8 128 aa4.75□□□□□ -1.65
TNFRSF11B-202ENST00000517352 FER1L6-AS1Q8NA97 138 aa4.75□□□□□ -1.65
TNFRSF11B-202ENST00000517352 PKIGQ9Y2B9 76 aa4.75□□□□□ -1.65
TNFRSF11B-202ENST00000517352 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.75□□□□□ -1.65
TNFRSF11B-202ENST00000517352 IGKV2-24A0A0C4DH68 120 aa4.74□□□□□ -1.65
TNFRSF11B-202ENST00000517352 F2Z2F3 143 aa4.74□□□□□ -1.65
TNFRSF11B-202ENST00000517352 RPL35P42766 123 aaKnown RBP4.74□□□□□ -1.65
TNFRSF11B-202ENST00000517352 GNG4P50150 75 aa4.74□□□□□ -1.65
TNFRSF11B-202ENST00000517352 AKR1D1P51857 326 aa4.74□□□□□ -1.65
TNFRSF11B-202ENST00000517352 TWIST1Q15672 202 aa4.74□□□□□ -1.65
TNFRSF11B-202ENST00000517352 IQCJQ1A5X6 159 aa4.74□□□□□ -1.65
TNFRSF11B-202ENST00000517352 RASL11AQ6T310 242 aa4.74□□□□□ -1.65
TNFRSF11B-202ENST00000517352 SDIM1Q6ZPB5 146 aa4.74□□□□□ -1.65
TNFRSF11B-202ENST00000517352 OR13C6PQ8NH95 151 aa4.74□□□□□ -1.65
TNFRSF11B-202ENST00000517352 RNF185Q96GF1 192 aa4.74□□□□□ -1.65
TNFRSF11B-202ENST00000517352 PRR34Q9NV39 138 aa4.74□□□□□ -1.65
TNFRSF11B-202ENST00000517352 GNG13Q9P2W3 67 aa4.74□□□□□ -1.65
TNFRSF11B-202ENST00000517352 LRP1Q07954 4544 aaKnown RBP4.74□□□□□ -1.65
TNFRSF11B-202ENST00000517352 A0A087WYN8 130 aa4.73□□□□□ -1.65
TNFRSF11B-202ENST00000517352 GAGE12HA6NDE8 117 aa4.73□□□□□ -1.65
TNFRSF11B-202ENST00000517352 CNBPP62633 177 aaKnown RBP4.73□□□□□ -1.65
TNFRSF11B-202ENST00000517352 SUMO4Q6EEV6 95 aa4.73□□□□□ -1.65
TNFRSF11B-202ENST00000517352 EIF5AL1Q6IS14 154 aaKnown RBP4.73□□□□□ -1.65
TNFRSF11B-202ENST00000517352 NTM-AS1Q6ZSK4 140 aa4.73□□□□□ -1.65
TNFRSF11B-202ENST00000517352 Q75L30 129 aa4.73□□□□□ -1.65
TNFRSF11B-202ENST00000517352 FAM19A5Q7Z5A7 132 aaPredicted RBP4.73□□□□□ -1.65
TNFRSF11B-202ENST00000517352 FAM19A1Q7Z5A9 133 aa4.73□□□□□ -1.65
TNFRSF11B-202ENST00000517352 TMEM101Q96IK0 257 aa4.73□□□□□ -1.65
TNFRSF11B-202ENST00000517352 MANBALQ9NQG1 85 aa4.73□□□□□ -1.65
TNFRSF11B-202ENST00000517352 NIT2Q9NQR4 276 aa4.73□□□□□ -1.65
TNFRSF11B-202ENST00000517352 VAX2Q9UIW0 290 aa4.73□□□□□ -1.65
TNFRSF11B-202ENST00000517352 PAM16Q9Y3D7 125 aa4.73□□□□□ -1.65
TNFRSF11B-202ENST00000517352 FAT3Q8TDW7 4589 aa4.73□□□□□ -1.65
TNFRSF11B-202ENST00000517352 M0QY20 66 aa4.72□□□□□ -1.65
TNFRSF11B-202ENST00000517352 CHTF8P0CG12 524 aa4.72□□□□□ -1.65
TNFRSF11B-202ENST00000517352 RPS10P46783 165 aaKnown RBP4.72□□□□□ -1.65
TNFRSF11B-202ENST00000517352 COX6A2Q02221 97 aa4.72□□□□□ -1.65
TNFRSF11B-202ENST00000517352 HIGD2BQ4VC39 106 aa4.72□□□□□ -1.65
TNFRSF11B-202ENST00000517352 CENPWQ5EE01 88 aa4.72□□□□□ -1.65
TNFRSF11B-202ENST00000517352 COMMD7Q86VX2 200 aa4.72□□□□□ -1.65
TNFRSF11B-202ENST00000517352 BORCS7Q96B45 105 aa4.72□□□□□ -1.65
TNFRSF11B-202ENST00000517352 MED9Q9NWA0 146 aa4.72□□□□□ -1.65
TNFRSF11B-202ENST00000517352 LINC00474Q9P2X8 69 aa4.72□□□□□ -1.65
TNFRSF11B-202ENST00000517352 A0A1B0GUV1 79 aa4.71□□□□□ -1.66
TNFRSF11B-202ENST00000517352 PHOX2AO14813 284 aa4.71□□□□□ -1.66
TNFRSF11B-202ENST00000517352 APCSP02743 223 aa4.71□□□□□ -1.66
TNFRSF11B-202ENST00000517352 ZNF25P17030 456 aaPredicted RBP4.71□□□□□ -1.66
TNFRSF11B-202ENST00000517352 CKS1BP61024 79 aa4.71□□□□□ -1.66
TNFRSF11B-202ENST00000517352 REG3GQ6UW15 175 aa4.71□□□□□ -1.66
TNFRSF11B-202ENST00000517352 STPG4Q8N801 248 aa4.71□□□□□ -1.66
TNFRSF11B-202ENST00000517352 MBD3L1Q8WWY6 194 aa4.71□□□□□ -1.66
TNFRSF11B-202ENST00000517352 MRAP2Q96G30 205 aa4.71□□□□□ -1.66
TNFRSF11B-202ENST00000517352 MLST8Q9BVC4 326 aa4.71□□□□□ -1.66
TNFRSF11B-202ENST00000517352 PRO0628Q9UI54 55 aa4.71□□□□□ -1.66
TNFRSF11B-202ENST00000517352 IGLV4-60A0A075B6I1 120 aa4.7□□□□□ -1.66
TNFRSF11B-202ENST00000517352 NTF3P20783 257 aa4.7□□□□□ -1.66
TNFRSF11B-202ENST00000517352 HNRNPA3P51991 378 aaKnown RBP4.7□□□□□ -1.66
TNFRSF11B-202ENST00000517352 KRTAP10-4P60372 401 aaPredicted RBP4.7□□□□□ -1.66
TNFRSF11B-202ENST00000517352 TEX261Q6UWH6 196 aa4.7□□□□□ -1.66
TNFRSF11B-202ENST00000517352 LYZL1Q6UWQ5 148 aa4.7□□□□□ -1.66
TNFRSF11B-202ENST00000517352 C20orf203Q8NBC4 194 aa4.7□□□□□ -1.66
TNFRSF11B-202ENST00000517352 PGLYRP4Q96LB8 373 aa4.7□□□□□ -1.66
TNFRSF11B-202ENST00000517352 CYTL1Q9NRR1 136 aa4.7□□□□□ -1.66
TNFRSF11B-202ENST00000517352 SS18L2Q9UHA2 77 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms