RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 ASXL3Q9C0F0 2248 aa0.37□□□□□ -2.35
RNU6-840P-201ENST00000517275 A0A0D9SFI3 127 aa0.37□□□□□ -2.35
RNU6-840P-201ENST00000517275 GTF2H5Q6ZYL4 71 aa0.37□□□□□ -2.35
RNU6-840P-201ENST00000517275 SPRR4Q96PI1 79 aa0.37□□□□□ -2.35
RNU6-840P-201ENST00000517275 TCEAL7Q9BRU2 100 aa0.37□□□□□ -2.35
RNU6-840P-201ENST00000517275 NRKQ7Z2Y5 1582 aa0.36□□□□□ -2.35
RNU6-840P-201ENST00000517275 OTOGQ6ZRI0 2925 aa0.36□□□□□ -2.35
RNU6-840P-201ENST00000517275 TRAV22A0A0B4J277 110 aa0.36□□□□□ -2.35
RNU6-840P-201ENST00000517275 PHGR1C9JFL3 82 aa0.36□□□□□ -2.35
RNU6-840P-201ENST00000517275 SFT2D2O95562 160 aa0.36□□□□□ -2.35
RNU6-840P-201ENST00000517275 UBE2D3P61077 147 aa0.36□□□□□ -2.35
RNU6-840P-201ENST00000517275 UBE2D2P62837 147 aa0.36□□□□□ -2.35
RNU6-840P-201ENST00000517275 POLQO75417 2590 aa0.36□□□□□ -2.35
RNU6-840P-201ENST00000517275 DOCK2Q92608 1830 aa0.36□□□□□ -2.35
RNU6-840P-201ENST00000517275 FAM208BQ5VWN6 2430 aa0.35□□□□□ -2.35
RNU6-840P-201ENST00000517275 CHD9Q3L8U1 2897 aa0.35□□□□□ -2.35
RNU6-840P-201ENST00000517275 MYOM1P52179 1685 aa0.35□□□□□ -2.35
RNU6-840P-201ENST00000517275 CHKB-CPT1BH3BT56 60 aa0.35□□□□□ -2.35
RNU6-840P-201ENST00000517275 APOC3P02656 99 aa0.35□□□□□ -2.35
RNU6-840P-201ENST00000517275 GNG11P61952 73 aa0.35□□□□□ -2.35
RNU6-840P-201ENST00000517275 TMEM170BQ5T4T1 132 aa0.35□□□□□ -2.35
RNU6-840P-201ENST00000517275 LRRC37A2A6NM11 1700 aa0.35□□□□□ -2.35
RNU6-840P-201ENST00000517275 ZFYVE16Q7Z3T8 1539 aa0.34□□□□□ -2.35
RNU6-840P-201ENST00000517275 NAP1L6A6NFF2 107 aa0.34□□□□□ -2.36
RNU6-840P-201ENST00000517275 Q5BKY6 102 aa0.34□□□□□ -2.36
RNU6-840P-201ENST00000517275 C12orf57Q99622 126 aa0.34□□□□□ -2.36
RNU6-840P-201ENST00000517275 UQCR10Q9UDW1 63 aa0.34□□□□□ -2.36
RNU6-840P-201ENST00000517275 SHANK2Q9UPX8 1470 aa0.34□□□□□ -2.36
RNU6-840P-201ENST00000517275 MUC5ACP98088 5654 aa0.34□□□□□ -2.36
RNU6-840P-201ENST00000517275 HMGXB3Q12766 1538 aa0.33□□□□□ -2.36
RNU6-840P-201ENST00000517275 PIEZO1Q92508 2521 aa0.33□□□□□ -2.36
RNU6-840P-201ENST00000517275 TRAV30A0A087WSZ9 112 aa0.33□□□□□ -2.36
RNU6-840P-201ENST00000517275 NPVFQ9HCQ7 196 aa0.33□□□□□ -2.36
RNU6-840P-201ENST00000517275 NXT2Q9NPJ8 142 aaKnown RBP0.33□□□□□ -2.36
RNU6-840P-201ENST00000517275 F8P00451 2351 aa0.33□□□□□ -2.36
RNU6-840P-201ENST00000517275 ARHGAP5Q13017 1502 aa0.33□□□□□ -2.36
RNU6-840P-201ENST00000517275 LRP1Q07954 4544 aaKnown RBP0.32□□□□□ -2.36
RNU6-840P-201ENST00000517275 TMEM218A2RU14 115 aa0.32□□□□□ -2.36
RNU6-840P-201ENST00000517275 RBP2P50120 134 aa0.32□□□□□ -2.36
RNU6-840P-201ENST00000517275 KRTDAPP60985 99 aa0.32□□□□□ -2.36
RNU6-840P-201ENST00000517275 Q0VG73 95 aa0.32□□□□□ -2.36
RNU6-840P-201ENST00000517275 FAM213BQ8TBF2 198 aa0.32□□□□□ -2.36
RNU6-840P-201ENST00000517275 TMEM263Q8WUH6 116 aaKnown RBP0.32□□□□□ -2.36
RNU6-840P-201ENST00000517275 SPHKAPQ2M3C7 1700 aa0.32□□□□□ -2.36
RNU6-840P-201ENST00000517275 MRC2Q9UBG0 1479 aa0.31□□□□□ -2.36
RNU6-840P-201ENST00000517275 C10orf142B7Z368 130 aa0.31□□□□□ -2.36
RNU6-840P-201ENST00000517275 MGPP08493 103 aa0.31□□□□□ -2.36
RNU6-840P-201ENST00000517275 COX6CP09669 75 aa0.31□□□□□ -2.36
RNU6-840P-201ENST00000517275 IGLC1P0CG04 106 aa0.31□□□□□ -2.36
RNU6-840P-201ENST00000517275 ACBD7Q8N6N7 88 aa0.31□□□□□ -2.36
RNU6-840P-201ENST00000517275 PRO1854Q9UHT4 67 aa0.31□□□□□ -2.36
RNU6-840P-201ENST00000517275 KDM3BQ7LBC6 1761 aa0.31□□□□□ -2.36
RNU6-840P-201ENST00000517275 PLXNB2O15031 1838 aa0.31□□□□□ -2.36
RNU6-840P-201ENST00000517275 PSME4Q14997 1843 aa0.31□□□□□ -2.36
RNU6-840P-201ENST00000517275 RAPGEF6Q8TEU7 1601 aa0.31□□□□□ -2.36
RNU6-840P-201ENST00000517275 CACNA1CQ13936 2221 aa0.3□□□□□ -2.36
RNU6-840P-201ENST00000517275 ATP6V1G2-DDX39BF2Z307 99 aa0.3□□□□□ -2.36
RNU6-840P-201ENST00000517275 BCE1O60756 84 aa0.3□□□□□ -2.36
RNU6-840P-201ENST00000517275 LAMC1P11047 1609 aa0.3□□□□□ -2.36
RNU6-840P-201ENST00000517275 AHCTF1Q8WYP5 2266 aa0.3□□□□□ -2.36
RNU6-840P-201ENST00000517275 KIF21AQ7Z4S6 1674 aa0.3□□□□□ -2.36
RNU6-840P-201ENST00000517275 WNK3Q9BYP7 1800 aa0.29□□□□□ -2.36
RNU6-840P-201ENST00000517275 ZNF236Q9UL36 1845 aa0.29□□□□□ -2.36
RNU6-840P-201ENST00000517275 DIP2CQ9Y2E4 1556 aa0.29□□□□□ -2.36
RNU6-840P-201ENST00000517275 S100A3P33764 101 aa0.29□□□□□ -2.36
RNU6-840P-201ENST00000517275 HAMPP81172 84 aa0.29□□□□□ -2.36
RNU6-840P-201ENST00000517275 Q6JHZ5 121 aa0.29□□□□□ -2.36
RNU6-840P-201ENST00000517275 SPCS1Q9Y6A9 102 aa0.29□□□□□ -2.36
RNU6-840P-201ENST00000517275 ABCC5O15440 1437 aa0.29□□□□□ -2.36
RNU6-840P-201ENST00000517275 FAT4Q6V0I7 4981 aa0.28□□□□□ -2.36
RNU6-840P-201ENST00000517275 ARHGEF5Q12774 1597 aa0.28□□□□□ -2.36
RNU6-840P-201ENST00000517275 NAV2Q8IVL1 2488 aa0.28□□□□□ -2.36
RNU6-840P-201ENST00000517275 LRP6O75581 1613 aa0.28□□□□□ -2.36
RNU6-840P-201ENST00000517275 I3L2K1 104 aa0.28□□□□□ -2.36
RNU6-840P-201ENST00000517275 SNCAP37840 140 aa0.28□□□□□ -2.36
RNU6-840P-201ENST00000517275 MANBALQ9NQG1 85 aa0.28□□□□□ -2.36
RNU6-840P-201ENST00000517275 ARL2-SNX15V9GYD0 113 aa0.28□□□□□ -2.36
RNU6-840P-201ENST00000517275 ZFHX3Q15911 3703 aa0.28□□□□□ -2.37
RNU6-840P-201ENST00000517275 KMT2DO14686 5537 aa0.28□□□□□ -2.37
RNU6-840P-201ENST00000517275 EHBP1L1Q8N3D4 1523 aa0.28□□□□□ -2.37
RNU6-840P-201ENST00000517275 MDN1Q9NU22 5596 aa0.27□□□□□ -2.37
RNU6-840P-201ENST00000517275 hADV29S1A0JD25 119 aa0.27□□□□□ -2.37
RNU6-840P-201ENST00000517275 SPINK1P00995 79 aa0.27□□□□□ -2.37
RNU6-840P-201ENST00000517275 SAA2P0DJI9 122 aaPredicted RBP0.27□□□□□ -2.37
RNU6-840P-201ENST00000517275 FAM223AQ8IWN6 122 aa0.27□□□□□ -2.37
RNU6-840P-201ENST00000517275 LINC00846Q9NV44 126 aa0.27□□□□□ -2.37
RNU6-840P-201ENST00000517275 FAIMQ9NVQ4 179 aa0.27□□□□□ -2.37
RNU6-840P-201ENST00000517275 SPTBN2O15020 2390 aa0.27□□□□□ -2.37
RNU6-840P-201ENST00000517275 NSD3Q9BZ95 1437 aa0.27□□□□□ -2.37
RNU6-840P-201ENST00000517275 NDUFC1O43677 76 aa0.26□□□□□ -2.37
RNU6-840P-201ENST00000517275 TET3O43151 1660 aa0.26□□□□□ -2.37
RNU6-840P-201ENST00000517275 SBF2Q86WG5 1849 aa0.26□□□□□ -2.37
RNU6-840P-201ENST00000517275 C2CD3Q4AC94 2353 aa0.25□□□□□ -2.37
RNU6-840P-201ENST00000517275 COL4A6Q14031 1691 aa0.25□□□□□ -2.37
RNU6-840P-201ENST00000517275 PRDM15P57071 1507 aaPredicted RBP0.25□□□□□ -2.37
RNU6-840P-201ENST00000517275 ADGRL2O95490 1459 aa0.25□□□□□ -2.37
RNU6-840P-201ENST00000517275 VPS8Q8N3P4 1428 aa0.25□□□□□ -2.37
RNU6-840P-201ENST00000517275 SEC11AP67812 179 aa0.25□□□□□ -2.37
RNU6-840P-201ENST00000517275 TP53AIP1Q9HCN2 124 aa0.25□□□□□ -2.37
RNU6-840P-201ENST00000517275 PRO0255Q9UI72 69 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms