RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 TEX48A0A1B0GUV7 120 aa3.79□□□□□ -1.8
SCARNA20.4-201ENST00000516969 TINCRA0A1B0GVN0 87 aa3.79□□□□□ -1.8
SCARNA20.4-201ENST00000516969 GYPEP15421 78 aa3.79□□□□□ -1.8
SCARNA20.4-201ENST00000516969 NMUP48645 174 aa3.79□□□□□ -1.8
SCARNA20.4-201ENST00000516969 TCTAP57738 103 aa3.79□□□□□ -1.8
SCARNA20.4-201ENST00000516969 SMAGPQ0VAQ4 97 aa3.79□□□□□ -1.8
SCARNA20.4-201ENST00000516969 TMEM97Q5BJF2 176 aa3.79□□□□□ -1.8
SCARNA20.4-201ENST00000516969 FAM19A3Q7Z5A8 133 aa3.79□□□□□ -1.8
SCARNA20.4-201ENST00000516969 VSIG2Q96IQ7 327 aa3.79□□□□□ -1.8
SCARNA20.4-201ENST00000516969 TMEM243Q9BU79 118 aa3.79□□□□□ -1.8
SCARNA20.4-201ENST00000516969 CDC42SE2Q9NRR3 84 aa3.79□□□□□ -1.8
SCARNA20.4-201ENST00000516969 HIGD1BQ9P298 99 aa3.79□□□□□ -1.8
SCARNA20.4-201ENST00000516969 TRBV25-1A0A075B6N4 114 aa3.78□□□□□ -1.8
SCARNA20.4-201ENST00000516969 A0A0J9YXV3 536 aa3.78□□□□□ -1.8
SCARNA20.4-201ENST00000516969 TMEM223A0PJW6 202 aa3.78□□□□□ -1.8
SCARNA20.4-201ENST00000516969 PAX4O43316 350 aa3.78□□□□□ -1.8
SCARNA20.4-201ENST00000516969 ATP5G1P05496 136 aa3.78□□□□□ -1.8
SCARNA20.4-201ENST00000516969 ZNF22P17026 224 aaPredicted RBP3.78□□□□□ -1.8
SCARNA20.4-201ENST00000516969 UBE2D1P51668 147 aa3.78□□□□□ -1.8
SCARNA20.4-201ENST00000516969 TIRAPP58753 221 aa3.78□□□□□ -1.8
SCARNA20.4-201ENST00000516969 C12orf74Q32Q52 190 aa3.78□□□□□ -1.8
SCARNA20.4-201ENST00000516969 Q6ZUT4 128 aa3.78□□□□□ -1.8
SCARNA20.4-201ENST00000516969 ATP6V0E2Q8NHE4 81 aa3.78□□□□□ -1.8
SCARNA20.4-201ENST00000516969 TTTY13Q9BZ97 58 aa3.78□□□□□ -1.8
SCARNA20.4-201ENST00000516969 C11orf68Q9H3H3 251 aaKnown RBP3.78□□□□□ -1.8
SCARNA20.4-201ENST00000516969 RETNQ9HD89 108 aa3.78□□□□□ -1.8
SCARNA20.4-201ENST00000516969 IGLV5-45A0A087WSX0 123 aa3.77□□□□□ -1.81
SCARNA20.4-201ENST00000516969 TRAV26-1A0A087WT03 109 aa3.77□□□□□ -1.81
SCARNA20.4-201ENST00000516969 TRAV8-6A0A0B4J262 113 aa3.77□□□□□ -1.81
SCARNA20.4-201ENST00000516969 MYMXA0A1B0GTQ4 84 aa3.77□□□□□ -1.81
SCARNA20.4-201ENST00000516969 A0A1B0GUV1 79 aa3.77□□□□□ -1.81
SCARNA20.4-201ENST00000516969 K7EIL1 84 aa3.77□□□□□ -1.81
SCARNA20.4-201ENST00000516969 ZNF25P17030 456 aaPredicted RBP3.77□□□□□ -1.81
SCARNA20.4-201ENST00000516969 HINT1P49773 126 aaPredicted RBP3.77□□□□□ -1.81
SCARNA20.4-201ENST00000516969 HERVK_113P61574 105 aa3.77□□□□□ -1.81
SCARNA20.4-201ENST00000516969 MPV17L2Q567V2 206 aa3.77□□□□□ -1.81
SCARNA20.4-201ENST00000516969 RNASE13Q5GAN3 156 aaKnown RBP3.77□□□□□ -1.81
SCARNA20.4-201ENST00000516969 BVES-AS1Q5T3Y7 98 aa3.77□□□□□ -1.81
SCARNA20.4-201ENST00000516969 TMEM170BQ5T4T1 132 aa3.77□□□□□ -1.81
SCARNA20.4-201ENST00000516969 DGAT2L7PQ6IED9 249 aa3.77□□□□□ -1.81
SCARNA20.4-201ENST00000516969 OR5A1Q8NGJ0 315 aa3.77□□□□□ -1.81
SCARNA20.4-201ENST00000516969 CHAC1Q9BUX1 264 aa3.77□□□□□ -1.81
SCARNA20.4-201ENST00000516969 HUWE1Q7Z6Z7 4374 aaKnown RBP3.77□□□□□ -1.81
SCARNA20.4-201ENST00000516969 A0A0J9YY99 117 aa3.76□□□□□ -1.81
SCARNA20.4-201ENST00000516969 F5H768 121 aa3.76□□□□□ -1.81
SCARNA20.4-201ENST00000516969 H3BNG1 76 aa3.76□□□□□ -1.81
SCARNA20.4-201ENST00000516969 UBE2L6O14933 153 aa3.76□□□□□ -1.81
SCARNA20.4-201ENST00000516969 LEPROTO15243 131 aa3.76□□□□□ -1.81
SCARNA20.4-201ENST00000516969 TSPEAR-AS2P59090 65 aa3.76□□□□□ -1.81
SCARNA20.4-201ENST00000516969 COX6A2Q02221 97 aa3.76□□□□□ -1.81
SCARNA20.4-201ENST00000516969 HSD52Q0P140 79 aa3.76□□□□□ -1.81
SCARNA20.4-201ENST00000516969 MRPL23Q16540 153 aaKnown RBP3.76□□□□□ -1.81
SCARNA20.4-201ENST00000516969 COL5A1-AS1Q5SY13 56 aa3.76□□□□□ -1.81
SCARNA20.4-201ENST00000516969 LINC00242Q5T6M2 205 aa3.76□□□□□ -1.81
SCARNA20.4-201ENST00000516969 AMMECR1LQ6DCA0 310 aa3.76□□□□□ -1.81
SCARNA20.4-201ENST00000516969 SH2D6Q7Z4S9 175 aa3.76□□□□□ -1.81
SCARNA20.4-201ENST00000516969 TM2D3Q9BRN9 247 aa3.76□□□□□ -1.81
SCARNA20.4-201ENST00000516969 IGLV4-60A0A075B6I1 120 aa3.75□□□□□ -1.81
SCARNA20.4-201ENST00000516969 A0A096LPF7 62 aa3.75□□□□□ -1.81
SCARNA20.4-201ENST00000516969 IGHV1-58A0A0C4DH39 117 aa3.75□□□□□ -1.81
SCARNA20.4-201ENST00000516969 ZNF815PA8K554 130 aa3.75□□□□□ -1.81
SCARNA20.4-201ENST00000516969 J3QQQ9 107 aa3.75□□□□□ -1.81
SCARNA20.4-201ENST00000516969 HERVK_113P63121 156 aa3.75□□□□□ -1.81
SCARNA20.4-201ENST00000516969 SEC11AP67812 179 aa3.75□□□□□ -1.81
SCARNA20.4-201ENST00000516969 GAGE6Q13070 117 aa3.75□□□□□ -1.81
SCARNA20.4-201ENST00000516969 BATFQ16520 125 aa3.75□□□□□ -1.81
SCARNA20.4-201ENST00000516969 TAL2Q16559 108 aa3.75□□□□□ -1.81
SCARNA20.4-201ENST00000516969 PLEKHB2Q96CS7 222 aa3.75□□□□□ -1.81
SCARNA20.4-201ENST00000516969 TMEM101Q96IK0 257 aa3.75□□□□□ -1.81
SCARNA20.4-201ENST00000516969 CHCHD5Q9BSY4 110 aa3.75□□□□□ -1.81
SCARNA20.4-201ENST00000516969 GEMIN7Q9H840 131 aaKnown RBP3.75□□□□□ -1.81
SCARNA20.4-201ENST00000516969 TRAV8-3A0A0A6YYJ7 113 aa3.74□□□□□ -1.81
SCARNA20.4-201ENST00000516969 TRAV13-1A0A0B4J241 112 aa3.74□□□□□ -1.81
SCARNA20.4-201ENST00000516969 IGLV5-39A0A0G2JS06 123 aa3.74□□□□□ -1.81
SCARNA20.4-201ENST00000516969 A0A0J9YWU9 116 aa3.74□□□□□ -1.81
SCARNA20.4-201ENST00000516969 A0A1B0GV90 55 aa3.74□□□□□ -1.81
SCARNA20.4-201ENST00000516969 PRB2P02812 416 aaPredicted RBP3.74□□□□□ -1.81
SCARNA20.4-201ENST00000516969 IGHV3-30-3P0DP02 117 aa3.74□□□□□ -1.81
SCARNA20.4-201ENST00000516969 HTN3P15516 51 aa3.74□□□□□ -1.81
SCARNA20.4-201ENST00000516969 RBX1P62877 108 aa3.74□□□□□ -1.81
SCARNA20.4-201ENST00000516969 LINC00469Q8N7U9 141 aa3.74□□□□□ -1.81
SCARNA20.4-201ENST00000516969 ORAOV1Q8WV07 137 aa3.74□□□□□ -1.81
SCARNA20.4-201ENST00000516969 SPATA25Q9BR10 227 aa3.74□□□□□ -1.81
SCARNA20.4-201ENST00000516969 TM2D2Q9BX73 214 aa3.74□□□□□ -1.81
SCARNA20.4-201ENST00000516969 CDKN2A-AS1Q9UH64 79 aa3.74□□□□□ -1.81
SCARNA20.4-201ENST00000516969 ICOSQ9Y6W8 199 aa3.74□□□□□ -1.81
SCARNA20.4-201ENST00000516969 IGHV3OR16-9A0A0B4J2B5 98 aa3.73□□□□□ -1.81
SCARNA20.4-201ENST00000516969 H3BRM9 83 aa3.73□□□□□ -1.81
SCARNA20.4-201ENST00000516969 CCL25O15444 150 aa3.73□□□□□ -1.81
SCARNA20.4-201ENST00000516969 SPINK8P0C7L1 97 aa3.73□□□□□ -1.81
SCARNA20.4-201ENST00000516969 LGALS3P17931 250 aaKnown RBP3.73□□□□□ -1.81
SCARNA20.4-201ENST00000516969 LELP1Q5T871 98 aa3.73□□□□□ -1.81
SCARNA20.4-201ENST00000516969 LYPD5Q6UWN5 251 aa3.73□□□□□ -1.81
SCARNA20.4-201ENST00000516969 Q6ZTC4 211 aa3.73□□□□□ -1.81
SCARNA20.4-201ENST00000516969 CEND1Q8N111 149 aa3.73□□□□□ -1.81
SCARNA20.4-201ENST00000516969 SPANXB1Q9NS25 103 aaPredicted RBP3.73□□□□□ -1.81
SCARNA20.4-201ENST00000516969 DNAH9Q9NYC9 4486 aa3.72□□□□□ -1.81
SCARNA20.4-201ENST00000516969 STAB2Q8WWQ8 2551 aa3.72□□□□□ -1.81
SCARNA20.4-201ENST00000516969 COL7A1Q02388 2944 aa3.72□□□□□ -1.81
SCARNA20.4-201ENST00000516969 IGHV3-64A0A075B6Q5 118 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms