RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 SMR3BP02814 79 aaPredicted RBP-4.53□□□□□ -3.13
SNORA40.13-201ENST00000516379 PPP1R2P41236 205 aa-4.53□□□□□ -3.13
SNORA40.13-201ENST00000516379 ZNF818PQ6ZRF7 136 aa-4.53□□□□□ -3.13
SNORA40.13-201ENST00000516379 WFDC13Q8IUB5 93 aa-4.53□□□□□ -3.13
SNORA40.13-201ENST00000516379 LINC00312Q9Y6C7 94 aa-4.53□□□□□ -3.13
SNORA40.13-201ENST00000516379 SHANK2Q9UPX8 1470 aa-4.54□□□□□ -3.14
SNORA40.13-201ENST00000516379 SH3BGRL3Q9H299 93 aa-4.54□□□□□ -3.14
SNORA40.13-201ENST00000516379 RPRMQ9NS64 109 aa-4.54□□□□□ -3.14
SNORA40.13-201ENST00000516379 CBLN4Q9NTU7 201 aa-4.54□□□□□ -3.14
SNORA40.13-201ENST00000516379 LYRM2Q9NU23 88 aaPredicted RBP-4.54□□□□□ -3.14
SNORA40.13-201ENST00000516379 MYH7P12883 1935 aa-4.54□□□□□ -3.14
SNORA40.13-201ENST00000516379 CETN3O15182 167 aa-4.55□□□□□ -3.14
SNORA40.13-201ENST00000516379 RPS17P08708 135 aaKnown RBP-4.55□□□□□ -3.14
SNORA40.13-201ENST00000516379 CDC42SE2Q9NRR3 84 aa-4.55□□□□□ -3.14
SNORA40.13-201ENST00000516379 RAPGEF6Q8TEU7 1601 aa-4.55□□□□□ -3.14
SNORA40.13-201ENST00000516379 BTAF1O14981 1849 aa-4.56□□□□□ -3.14
SNORA40.13-201ENST00000516379 KDM5CP41229 1560 aa-4.56□□□□□ -3.14
SNORA40.13-201ENST00000516379 HIST1H1BP16401 226 aaKnown RBP-4.56□□□□□ -3.14
SNORA40.13-201ENST00000516379 MAGOHP61326 146 aaKnown RBP-4.56□□□□□ -3.14
SNORA40.13-201ENST00000516379 AKR1C8PQ5T2L2 129 aa-4.56□□□□□ -3.14
SNORA40.13-201ENST00000516379 PCF11O94913 1555 aaKnown RBP-4.57□□□□□ -3.14
SNORA40.13-201ENST00000516379 J3QLW9 94 aa-4.57□□□□□ -3.14
SNORA40.13-201ENST00000516379 LINC01545Q5VT33 79 aa-4.57□□□□□ -3.14
SNORA40.13-201ENST00000516379 DISP2A7MBM2 1401 aa-4.57□□□□□ -3.14
SNORA40.13-201ENST00000516379 ZFYVE9O95405 1425 aa-4.57□□□□□ -3.14
SNORA40.13-201ENST00000516379 NWD2Q9ULI1 1742 aa-4.58□□□□□ -3.14
SNORA40.13-201ENST00000516379 ATP11AUNQ6ZP68 121 aa-4.58□□□□□ -3.14
SNORA40.13-201ENST00000516379 C9orf16Q9BUW7 83 aa-4.58□□□□□ -3.14
SNORA40.13-201ENST00000516379 IFNA17P01571 189 aa-4.59□□□□□ -3.14
SNORA40.13-201ENST00000516379 TCRAP04437 139 aa-4.59□□□□□ -3.14
SNORA40.13-201ENST00000516379 S100A11P31949 105 aa-4.59□□□□□ -3.14
SNORA40.13-201ENST00000516379 S100A5P33763 92 aa-4.59□□□□□ -3.14
SNORA40.13-201ENST00000516379 BAGE2Q86Y30 109 aa-4.59□□□□□ -3.14
SNORA40.13-201ENST00000516379 DOCK2Q92608 1830 aa-4.59□□□□□ -3.14
SNORA40.13-201ENST00000516379 V9GYH0 126 aa-4.59□□□□□ -3.14
SNORA40.13-201ENST00000516379 CSMD2Q7Z408 3487 aa-4.6□□□□□ -3.15
SNORA40.13-201ENST00000516379 MGAQ8IWI9 3026 aa-4.6□□□□□ -3.15
SNORA40.13-201ENST00000516379 HSBP1L1C9JCN9 74 aa-4.6□□□□□ -3.15
SNORA40.13-201ENST00000516379 UQCR11O14957 56 aa-4.6□□□□□ -3.15
SNORA40.13-201ENST00000516379 RPL22P35268 128 aaKnown RBP-4.6□□□□□ -3.15
SNORA40.13-201ENST00000516379 HEPN1Q6WQI6 88 aa-4.6□□□□□ -3.15
SNORA40.13-201ENST00000516379 CCDC42Q96M95 316 aa-4.6□□□□□ -3.15
SNORA40.13-201ENST00000516379 HSD11B1P28845 292 aa-4.61□□□□□ -3.15
SNORA40.13-201ENST00000516379 LSM6P62312 80 aaKnown RBP-4.61□□□□□ -3.15
SNORA40.13-201ENST00000516379 BTG2P78543 158 aa-4.61□□□□□ -3.15
SNORA40.13-201ENST00000516379 C10orf113Q5VZT2 155 aa-4.61□□□□□ -3.15
SNORA40.13-201ENST00000516379 DCUN1D2Q6PH85 259 aa-4.61□□□□□ -3.15
SNORA40.13-201ENST00000516379 DNAJC15Q9Y5T4 150 aa-4.61□□□□□ -3.15
SNORA40.13-201ENST00000516379 BORCS7-ASMTA0A0B4J1R7 106 aa-4.62□□□□□ -3.15
SNORA40.13-201ENST00000516379 I3L3M4 83 aa-4.62□□□□□ -3.15
SNORA40.13-201ENST00000516379 RPS28P62857 69 aaKnown RBP-4.62□□□□□ -3.15
SNORA40.13-201ENST00000516379 AKAP14Q86UN6 197 aa-4.62□□□□□ -3.15
SNORA40.13-201ENST00000516379 MRPL40Q9NQ50 206 aaKnown RBP-4.62□□□□□ -3.15
SNORA40.13-201ENST00000516379 CDKN2A-AS1Q9UH64 79 aa-4.62□□□□□ -3.15
SNORA40.13-201ENST00000516379 RIMS1Q86UR5 1692 aaKnown RBP-4.62□□□□□ -3.15
SNORA40.13-201ENST00000516379 A2MP01023 1474 aa-4.62□□□□□ -3.15
SNORA40.13-201ENST00000516379 A0A0G2JMZ2 1700 aa-4.63□□□□□ -3.15
SNORA40.13-201ENST00000516379 MYH13Q9UKX3 1938 aa-4.63□□□□□ -3.15
SNORA40.13-201ENST00000516379 TRBV7-3A0A075B6L6 115 aa-4.63□□□□□ -3.15
SNORA40.13-201ENST00000516379 CST2P09228 141 aa-4.63□□□□□ -3.15
SNORA40.13-201ENST00000516379 TPM1P09493 284 aa-4.63□□□□□ -3.15
SNORA40.13-201ENST00000516379 SCIMPQ6UWF3 145 aa-4.63□□□□□ -3.15
SNORA40.13-201ENST00000516379 ARMC1Q9NVT9 282 aa-4.63□□□□□ -3.15
SNORA40.13-201ENST00000516379 SS18L2Q9UHA2 77 aa-4.63□□□□□ -3.15
SNORA40.13-201ENST00000516379 APOC3P02656 99 aa-4.64□□□□□ -3.15
SNORA40.13-201ENST00000516379 UBE2G1P62253 170 aa-4.64□□□□□ -3.15
SNORA40.13-201ENST00000516379 TMEM263Q8WUH6 116 aaKnown RBP-4.64□□□□□ -3.15
SNORA40.13-201ENST00000516379 CCDC141Q6ZP82 1450 aa-4.64□□□□□ -3.15
SNORA40.13-201ENST00000516379 TRAV30A0A087WSZ9 112 aa-4.65□□□□□ -3.15
SNORA40.13-201ENST00000516379 A0A087WVE0 104 aa-4.65□□□□□ -3.15
SNORA40.13-201ENST00000516379 RPL7P18124 248 aaKnown RBP-4.65□□□□□ -3.15
SNORA40.13-201ENST00000516379 TPPP2P59282 170 aa-4.65□□□□□ -3.15
SNORA40.13-201ENST00000516379 MRPL34Q9BQ48 92 aaKnown RBP-4.65□□□□□ -3.15
SNORA40.13-201ENST00000516379 QRICH2Q9H0J4 1663 aa-4.65□□□□□ -3.15
SNORA40.13-201ENST00000516379 NCOA3Q9Y6Q9 1424 aa-4.65□□□□□ -3.15
SNORA40.13-201ENST00000516379 MYH6P13533 1939 aa-4.66□□□□□ -3.15
SNORA40.13-201ENST00000516379 CMPK1P30085 196 aa-4.66□□□□□ -3.16
SNORA40.13-201ENST00000516379 SPANXN1Q5VSR9 72 aa-4.66□□□□□ -3.16
SNORA40.13-201ENST00000516379 RPL7L1Q6DKI1 246 aaKnown RBP-4.66□□□□□ -3.16
SNORA40.13-201ENST00000516379 TMED4Q7Z7H5 227 aa-4.66□□□□□ -3.16
SNORA40.13-201ENST00000516379 SPTSSBQ8NFR3 76 aa-4.66□□□□□ -3.16
SNORA40.13-201ENST00000516379 LENEPQ9Y5L5 61 aa-4.66□□□□□ -3.16
SNORA40.13-201ENST00000516379 RPP14O95059 124 aaKnown RBP-4.67□□□□□ -3.16
SNORA40.13-201ENST00000516379 RBP4P02753 201 aa-4.67□□□□□ -3.16
SNORA40.13-201ENST00000516379 TPM2P07951 284 aa-4.67□□□□□ -3.16
SNORA40.13-201ENST00000516379 STX12Q86Y82 276 aa-4.67□□□□□ -3.16
SNORA40.13-201ENST00000516379 LAMTOR2Q9Y2Q5 125 aa-4.67□□□□□ -3.16
SNORA40.13-201ENST00000516379 A6NIN4 97 aa-4.68□□□□□ -3.16
SNORA40.13-201ENST00000516379 FGF7P21781 194 aa-4.68□□□□□ -3.16
SNORA40.13-201ENST00000516379 CCL8P80075 99 aa-4.68□□□□□ -3.16
SNORA40.13-201ENST00000516379 LINC01600Q96MT4 127 aa-4.68□□□□□ -3.16
SNORA40.13-201ENST00000516379 HIGD1BQ9P298 99 aa-4.68□□□□□ -3.16
SNORA40.13-201ENST00000516379 LINC01558Q9Y6Z2 57 aa-4.68□□□□□ -3.16
SNORA40.13-201ENST00000516379 ERCC6Q03468 1493 aa-4.69□□□□□ -3.16
SNORA40.13-201ENST00000516379 CCL22O00626 93 aa-4.69□□□□□ -3.16
SNORA40.13-201ENST00000516379 PSPHP78330 225 aa-4.69□□□□□ -3.16
SNORA40.13-201ENST00000516379 ALKQ9UM73 1620 aa-4.7□□□□□ -3.16
SNORA40.13-201ENST00000516379 ATG12O94817 140 aa-4.7□□□□□ -3.16
SNORA40.13-201ENST00000516379 CAMSAP1Q5T5Y3 1602 aa-4.71□□□□□ -3.16
SNORA40.13-201ENST00000516379 YPEL1O60688 119 aa-4.71□□□□□ -3.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms