RNA–Protein interactions for RNA: ENST00000515452.1

NR1I3-233, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 2 BASIC

Gene NR1I3, Length 1,093 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-233	ENST00000515452	KRTAP29-1	A8MX34	341 aa	Predicted RBP	5.18	□□□□□ -1.58
NR1I3-233	ENST00000515452	PHOX2A	O14813	284 aa		5.18	□□□□□ -1.58
NR1I3-233	ENST00000515452	PPP1R17	O96001	155 aa		5.18	□□□□□ -1.58
NR1I3-233	ENST00000515452	BTF3	P20290	206 aa	Known RBP	5.18	□□□□□ -1.58
NR1I3-233	ENST00000515452	RPL32	P62910	135 aa	Known RBP	5.18	□□□□□ -1.58
NR1I3-233	ENST00000515452	WFDC2	Q14508	124 aa		5.18	□□□□□ -1.58
NR1I3-233	ENST00000515452	LINC00269	Q8N2A0	174 aa		5.18	□□□□□ -1.58
NR1I3-233	ENST00000515452	UBE2W	Q96B02	151 aa		5.18	□□□□□ -1.58
NR1I3-233	ENST00000515452		A0A1B0GUV1	79 aa		5.17	□□□□□ -1.58
NR1I3-233	ENST00000515452	PRSS47	A8MTI9	375 aa		5.17	□□□□□ -1.58
NR1I3-233	ENST00000515452	UBE2L6	O14933	153 aa		5.17	□□□□□ -1.58
NR1I3-233	ENST00000515452	HLA-DQA1	P01909	254 aa		5.17	□□□□□ -1.58
NR1I3-233	ENST00000515452	FGF6	P10767	208 aa		5.17	□□□□□ -1.58
NR1I3-233	ENST00000515452	KRTAP10-2	P60368	255 aa		5.17	□□□□□ -1.58
NR1I3-233	ENST00000515452	RPL39	P62891	51 aa	Known RBP	5.17	□□□□□ -1.58
NR1I3-233	ENST00000515452	KRTAP26-1	Q6PEX3	210 aa		5.17	□□□□□ -1.58
NR1I3-233	ENST00000515452	NFE4	Q86UQ8	179 aa		5.17	□□□□□ -1.58
NR1I3-233	ENST00000515452	KIR2DL4	Q99706	377 aa		5.17	□□□□□ -1.58
NR1I3-233	ENST00000515452	GNB1L	Q9BYB4	327 aa		5.17	□□□□□ -1.58
NR1I3-233	ENST00000515452	PRR34	Q9NV39	138 aa		5.17	□□□□□ -1.58
NR1I3-233	ENST00000515452	FAT1	Q14517	4588 aa		5.17	□□□□□ -1.58
NR1I3-233	ENST00000515452	VPS13B	Q7Z7G8	4022 aa		5.17	□□□□□ -1.58
NR1I3-233	ENST00000515452	IGKV2D-24	A0A075B6R9	120 aa		5.16	□□□□□ -1.58
NR1I3-233	ENST00000515452		A0A087WTM6	91 aa		5.16	□□□□□ -1.58
NR1I3-233	ENST00000515452	TRAV8-3	A0A0A6YYJ7	113 aa		5.16	□□□□□ -1.58
NR1I3-233	ENST00000515452	SCO1	O75880	301 aa		5.16	□□□□□ -1.58
NR1I3-233	ENST00000515452	FCER1G	P30273	86 aa		5.16	□□□□□ -1.58
NR1I3-233	ENST00000515452	IFI27	P40305	119 aa	Predicted RBP	5.16	□□□□□ -1.58
NR1I3-233	ENST00000515452	PKIA	P61925	76 aa		5.16	□□□□□ -1.58
NR1I3-233	ENST00000515452	REG3A	Q06141	175 aa		5.16	□□□□□ -1.58
NR1I3-233	ENST00000515452	RNASEK	Q6P5S7	137 aa	Known RBP	5.16	□□□□□ -1.58
NR1I3-233	ENST00000515452	FAM104A	Q969W3	186 aa		5.16	□□□□□ -1.58
NR1I3-233	ENST00000515452	ALKBH7	Q9BT30	221 aa	Predicted RBP	5.16	□□□□□ -1.58
NR1I3-233	ENST00000515452	MAP1LC3A	Q9H492	121 aa		5.16	□□□□□ -1.58
NR1I3-233	ENST00000515452	LAMTOR2	Q9Y2Q5	125 aa		5.16	□□□□□ -1.58
NR1I3-233	ENST00000515452	UBE2D4	Q9Y2X8	147 aa		5.16	□□□□□ -1.58
NR1I3-233	ENST00000515452	IGLV10-54	A0A075B6I4	117 aa		5.15	□□□□□ -1.59
NR1I3-233	ENST00000515452	IGKV3OR2-268	A0A0C4DH90	116 aa		5.15	□□□□□ -1.59
NR1I3-233	ENST00000515452		H7C423	109 aa		5.15	□□□□□ -1.59
NR1I3-233	ENST00000515452	LECT2	O14960	151 aa		5.15	□□□□□ -1.59
NR1I3-233	ENST00000515452	CRP	P02741	224 aa		5.15	□□□□□ -1.59
NR1I3-233	ENST00000515452	FABP9	Q0Z7S8	132 aa		5.15	□□□□□ -1.59
NR1I3-233	ENST00000515452	COX19	Q49B96	90 aa		5.15	□□□□□ -1.59
NR1I3-233	ENST00000515452	RNASE13	Q5GAN3	156 aa	Known RBP	5.15	□□□□□ -1.59
NR1I3-233	ENST00000515452	AMMECR1L	Q6DCA0	310 aa		5.15	□□□□□ -1.59
NR1I3-233	ENST00000515452	MRPL52	Q86TS9	123 aa	Known RBP	5.15	□□□□□ -1.59
NR1I3-233	ENST00000515452		Q8N8P6	123 aa		5.15	□□□□□ -1.59
NR1I3-233	ENST00000515452	OPRPN	Q99935	248 aa	Predicted RBP	5.15	□□□□□ -1.59
NR1I3-233	ENST00000515452	SMCO4	Q9NRQ5	59 aa		5.15	□□□□□ -1.59
NR1I3-233	ENST00000515452	TRAPPC1	Q9Y5R8	145 aa		5.15	□□□□□ -1.59
NR1I3-233	ENST00000515452	PSCA	O43653	123 aa		5.14	□□□□□ -1.59
NR1I3-233	ENST00000515452	SMR3B	P02814	79 aa	Predicted RBP	5.14	□□□□□ -1.59
NR1I3-233	ENST00000515452	MT-ND6	P03923	174 aa		5.14	□□□□□ -1.59
NR1I3-233	ENST00000515452		Q0VG73	95 aa		5.14	□□□□□ -1.59
NR1I3-233	ENST00000515452		Q6ZUT4	128 aa		5.14	□□□□□ -1.59
NR1I3-233	ENST00000515452	BAALC	Q8WXS3	180 aa		5.14	□□□□□ -1.59
NR1I3-233	ENST00000515452	URB1-AS1	Q96HZ7	61 aa		5.14	□□□□□ -1.59
NR1I3-233	ENST00000515452	C1orf43	Q9BWL3	253 aa		5.14	□□□□□ -1.59
NR1I3-233	ENST00000515452	CDC42SE2	Q9NRR3	84 aa		5.14	□□□□□ -1.59
NR1I3-233	ENST00000515452	ZNF25	P17030	456 aa	Predicted RBP	5.13	□□□□□ -1.59
NR1I3-233	ENST00000515452	MIA	Q16674	131 aa		5.13	□□□□□ -1.59
NR1I3-233	ENST00000515452	CDPF1	Q6NVV7	123 aa		5.13	□□□□□ -1.59
NR1I3-233	ENST00000515452	ZNF664	Q8N3J9	261 aa		5.13	□□□□□ -1.59
NR1I3-233	ENST00000515452	OR5A1	Q8NGJ0	315 aa		5.13	□□□□□ -1.59
NR1I3-233	ENST00000515452	LINC00959	A0A1B0GUT2	108 aa		5.12	□□□□□ -1.59
NR1I3-233	ENST00000515452	COLCA2	A8K830	154 aa		5.12	□□□□□ -1.59
NR1I3-233	ENST00000515452	RAB5A	P20339	215 aa		5.12	□□□□□ -1.59
NR1I3-233	ENST00000515452	ZC2HC1B	Q5TFG8	222 aa		5.12	□□□□□ -1.59
NR1I3-233	ENST00000515452		Q8N814	137 aa		5.12	□□□□□ -1.59
NR1I3-233	ENST00000515452	C18orf32	Q8TCD1	76 aa		5.12	□□□□□ -1.59
NR1I3-233	ENST00000515452	RMI2	Q96E14	147 aa		5.12	□□□□□ -1.59
NR1I3-233	ENST00000515452	TMEM101	Q96IK0	257 aa		5.12	□□□□□ -1.59
NR1I3-233	ENST00000515452	TIMM21	Q9BVV7	248 aa		5.12	□□□□□ -1.59
NR1I3-233	ENST00000515452	TM2D2	Q9BX73	214 aa		5.12	□□□□□ -1.59
NR1I3-233	ENST00000515452	NXT2	Q9NPJ8	142 aa	Known RBP	5.12	□□□□□ -1.59
NR1I3-233	ENST00000515452	CSDC2	Q9Y534	153 aa	Known RBP	5.12	□□□□□ -1.59
NR1I3-233	ENST00000515452	GAGE12H	A6NDE8	117 aa		5.11	□□□□□ -1.59
NR1I3-233	ENST00000515452	LINC01546	A6NGU7	62 aa		5.11	□□□□□ -1.59
NR1I3-233	ENST00000515452	C2orf66	Q6UXQ4	117 aa		5.11	□□□□□ -1.59
NR1I3-233	ENST00000515452	PRSS3P2	Q8NHM4	247 aa		5.11	□□□□□ -1.59
NR1I3-233	ENST00000515452	NTN5	Q8WTR8	489 aa	Predicted RBP	5.11	□□□□□ -1.59
NR1I3-233	ENST00000515452	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	5.11	□□□□□ -1.59
NR1I3-233	ENST00000515452	SPANXA1	Q9NS26	97 aa		5.11	□□□□□ -1.59
NR1I3-233	ENST00000515452	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	5.1	□□□□□ -1.59
NR1I3-233	ENST00000515452	IGLV4-3	A0A075B6K6	122 aa		5.1	□□□□□ -1.59
NR1I3-233	ENST00000515452		A0A096LNJ9	63 aa		5.1	□□□□□ -1.59
NR1I3-233	ENST00000515452	TRAV8-4	A0A0B4J246	113 aa		5.1	□□□□□ -1.59
NR1I3-233	ENST00000515452	IGIP	A6NJ69	53 aa		5.1	□□□□□ -1.59
NR1I3-233	ENST00000515452	USP17L23	D6RBM5	183 aa		5.1	□□□□□ -1.59
NR1I3-233	ENST00000515452	CCL25	O15444	150 aa		5.1	□□□□□ -1.59
NR1I3-233	ENST00000515452	ATP6V1G1	O75348	118 aa		5.1	□□□□□ -1.59
NR1I3-233	ENST00000515452	TRGC2	P03986	189 aa		5.1	□□□□□ -1.59
NR1I3-233	ENST00000515452	XCL1	P47992	114 aa		5.1	□□□□□ -1.59
NR1I3-233	ENST00000515452	FOXI1	Q12951	378 aa		5.1	□□□□□ -1.59
NR1I3-233	ENST00000515452	ORMDL2	Q53FV1	153 aa		5.1	□□□□□ -1.59
NR1I3-233	ENST00000515452	DGAT2L7P	Q6IED9	249 aa		5.1	□□□□□ -1.59
NR1I3-233	ENST00000515452	LINC00173	Q6ZV60	143 aa		5.1	□□□□□ -1.59
NR1I3-233	ENST00000515452	TMEM18	Q96B42	140 aa		5.1	□□□□□ -1.59
NR1I3-233	ENST00000515452	COX11	Q9Y6N1	276 aa		5.1	□□□□□ -1.59
NR1I3-233	ENST00000515452	RNF213	Q63HN8	5207 aa		5.1	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms