RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 RBMY1A1P0DJD3 496 aaKnown RBP9.22□□□□□ -0.93
SMAD1-215ENST00000515385 RBMY1CP0DJD4 496 aa9.22□□□□□ -0.93
SMAD1-215ENST00000515385 PROK1P58294 105 aa9.22□□□□□ -0.93
SMAD1-215ENST00000515385 RBMY1FQ15415 496 aaKnown RBP9.22□□□□□ -0.93
SMAD1-215ENST00000515385 GHRHP01286 108 aa9.21□□□□□ -0.93
SMAD1-215ENST00000515385 IGHV3-53P01767 116 aa9.21□□□□□ -0.93
SMAD1-215ENST00000515385 HOXD3P31249 432 aaPredicted RBP9.21□□□□□ -0.93
SMAD1-215ENST00000515385 A0A087WYN8 130 aa9.2□□□□□ -0.94
SMAD1-215ENST00000515385 TMEM243Q9BU79 118 aa9.2□□□□□ -0.94
SMAD1-215ENST00000515385 IGLV1-40P01703 118 aa9.2□□□□□ -0.94
SMAD1-215ENST00000515385 Q8NA96 180 aa9.2□□□□□ -0.94
SMAD1-215ENST00000515385 KALRNO60229 2985 aa9.2□□□□□ -0.94
SMAD1-215ENST00000515385 SMIM11BQ8TCY0 68 aa9.19□□□□□ -0.94
SMAD1-215ENST00000515385 SND1-IT1Q9HBX3 110 aa9.19□□□□□ -0.94
SMAD1-215ENST00000515385 JMJD7-PLA2G4BH0Y9G9 81 aa9.19□□□□□ -0.94
SMAD1-215ENST00000515385 LYPD5Q6UWN5 251 aa9.19□□□□□ -0.94
SMAD1-215ENST00000515385 LINC00337Q8N6G1 96 aa9.19□□□□□ -0.94
SMAD1-215ENST00000515385 C9orf129Q5T035 196 aaKnown RBP9.18□□□□□ -0.94
SMAD1-215ENST00000515385 Q6ZSN1 163 aa9.17□□□□□ -0.94
SMAD1-215ENST00000515385 ORMDL1Q9P0S3 153 aa9.17□□□□□ -0.94
SMAD1-215ENST00000515385 IGKV2-28A0A075B6P5 120 aa9.17□□□□□ -0.94
SMAD1-215ENST00000515385 IGKV2D-28P01615 120 aa9.17□□□□□ -0.94
SMAD1-215ENST00000515385 LECT2O14960 151 aa9.16□□□□□ -0.94
SMAD1-215ENST00000515385 XCL1P47992 114 aa9.16□□□□□ -0.94
SMAD1-215ENST00000515385 XCL2Q9UBD3 114 aa9.16□□□□□ -0.94
SMAD1-215ENST00000515385 TPRP12270 2363 aaKnown RBP9.16□□□□□ -0.94
SMAD1-215ENST00000515385 MUC3AQ02505 3323 aa9.16□□□□□ -0.94
SMAD1-215ENST00000515385 NACAE9PAV3 2078 aa9.16□□□□□ -0.94
SMAD1-215ENST00000515385 IGHV3-38A0A0C4DH36 116 aa9.16□□□□□ -0.94
SMAD1-215ENST00000515385 KNCNA6PVL3 124 aa9.16□□□□□ -0.94
SMAD1-215ENST00000515385 NCR3O14931 201 aa9.16□□□□□ -0.94
SMAD1-215ENST00000515385 AVPP01185 164 aa9.15□□□□□ -0.94
SMAD1-215ENST00000515385 MIR7-3HGQ8N6C7 128 aa9.15□□□□□ -0.94
SMAD1-215ENST00000515385 GPR179Q6PRD1 2367 aa9.14□□□□□ -0.95
SMAD1-215ENST00000515385 LMO4P61968 165 aa9.14□□□□□ -0.95
SMAD1-215ENST00000515385 Q9UF83 564 aa9.14□□□□□ -0.95
SMAD1-215ENST00000515385 MUC6Q6W4X9 2439 aa9.14□□□□□ -0.95
SMAD1-215ENST00000515385 WDFY4Q6ZS81 3184 aa9.14□□□□□ -0.95
SMAD1-215ENST00000515385 TRAV7A0A075B6U4 112 aa9.14□□□□□ -0.95
SMAD1-215ENST00000515385 A8MTW9 85 aa9.14□□□□□ -0.95
SMAD1-215ENST00000515385 GRNP28799 593 aaKnown RBP9.14□□□□□ -0.95
SMAD1-215ENST00000515385 C20orf197Q8N268 126 aa9.14□□□□□ -0.95
SMAD1-215ENST00000515385 LINC00167Q96N53 147 aa9.14□□□□□ -0.95
SMAD1-215ENST00000515385 SPENQ96T58 3664 aaKnown RBP9.13□□□□□ -0.95
SMAD1-215ENST00000515385 A6NDX4 124 aa9.13□□□□□ -0.95
SMAD1-215ENST00000515385 RPL36AP83881 106 aaKnown RBP9.13□□□□□ -0.95
SMAD1-215ENST00000515385 CFHR3Q02985 330 aa9.13□□□□□ -0.95
SMAD1-215ENST00000515385 FP248Q71RG6 208 aaPredicted RBP9.13□□□□□ -0.95
SMAD1-215ENST00000515385 RPL36ALQ969Q0 106 aaKnown RBP9.13□□□□□ -0.95
SMAD1-215ENST00000515385 SMG1Q96Q15 3661 aaKnown RBP9.13□□□□□ -0.95
SMAD1-215ENST00000515385 CEP250Q9BV73 2442 aa9.13□□□□□ -0.95
SMAD1-215ENST00000515385 ZDBF2Q9HCK1 2354 aa9.13□□□□□ -0.95
SMAD1-215ENST00000515385 DMDP11532 3685 aa9.13□□□□□ -0.95
SMAD1-215ENST00000515385 TRAV23DV6A0A075B6W5 121 aa9.12□□□□□ -0.95
SMAD1-215ENST00000515385 COX7B2Q8TF08 81 aa9.12□□□□□ -0.95
SMAD1-215ENST00000515385 UBL5Q9BZL1 73 aa9.12□□□□□ -0.95
SMAD1-215ENST00000515385 DCHS1Q96JQ0 3298 aa9.12□□□□□ -0.95
SMAD1-215ENST00000515385 HTN1P15515 57 aa9.12□□□□□ -0.95
SMAD1-215ENST00000515385 HILS1P60008 231 aa9.12□□□□□ -0.95
SMAD1-215ENST00000515385 C1orf158Q8N1D5 194 aa9.12□□□□□ -0.95
SMAD1-215ENST00000515385 CDC42SE2Q9NRR3 84 aa9.12□□□□□ -0.95
SMAD1-215ENST00000515385 H7BZZ5 65 aa9.11□□□□□ -0.95
SMAD1-215ENST00000515385 NBL1P41271 181 aa9.11□□□□□ -0.95
SMAD1-215ENST00000515385 FAM19A1Q7Z5A9 133 aa9.11□□□□□ -0.95
SMAD1-215ENST00000515385 WFDC11Q8NEX6 87 aa9.11□□□□□ -0.95
SMAD1-215ENST00000515385 TMEM89A2RUT3 159 aa9.11□□□□□ -0.95
SMAD1-215ENST00000515385 IBA57-AS1B1ANH7 110 aa9.11□□□□□ -0.95
SMAD1-215ENST00000515385 CDSNQ15517 529 aa9.11□□□□□ -0.95
SMAD1-215ENST00000515385 TMEM256-PLSCR3K7ERE1 68 aa9.1□□□□□ -0.95
SMAD1-215ENST00000515385 LY6G6DO95868 133 aa9.1□□□□□ -0.95
SMAD1-215ENST00000515385 CCL18P55774 89 aa9.1□□□□□ -0.95
SMAD1-215ENST00000515385 LINC00158P58513 81 aa9.1□□□□□ -0.95
SMAD1-215ENST00000515385 KLKP1Q107X0 134 aa9.1□□□□□ -0.95
SMAD1-215ENST00000515385 SS18Q15532 418 aa9.1□□□□□ -0.95
SMAD1-215ENST00000515385 ENHOQ6UWT2 76 aa9.1□□□□□ -0.95
SMAD1-215ENST00000515385 BRK1Q8WUW1 75 aa9.1□□□□□ -0.95
SMAD1-215ENST00000515385 TRBV10-1A0A0K0K1A3 114 aa9.09□□□□□ -0.95
SMAD1-215ENST00000515385 DMXL2Q8TDJ6 3036 aa9.09□□□□□ -0.95
SMAD1-215ENST00000515385 RP1L1Q8IWN7 2480 aaPredicted RBP9.09□□□□□ -0.95
SMAD1-215ENST00000515385 PIEZO1Q92508 2521 aa9.09□□□□□ -0.95
SMAD1-215ENST00000515385 CNOT1A5YKK6 2376 aaKnown RBP9.09□□□□□ -0.95
SMAD1-215ENST00000515385 ATP5EP56381 51 aaPredicted RBP9.09□□□□□ -0.95
SMAD1-215ENST00000515385 LY6EQ16553 131 aa9.09□□□□□ -0.95
SMAD1-215ENST00000515385 ZFHX4Q86UP3 3567 aa9.09□□□□□ -0.95
SMAD1-215ENST00000515385 NDUFC1O43677 76 aa9.08□□□□□ -0.96
SMAD1-215ENST00000515385 C11orf72Q8NBR9 251 aa9.08□□□□□ -0.96
SMAD1-215ENST00000515385 Q96MF0 132 aa9.08□□□□□ -0.96
SMAD1-215ENST00000515385 TRBV6-4A0A1B0GX49 114 aa9.08□□□□□ -0.96
SMAD1-215ENST00000515385 LAMTOR3Q9UHA4 124 aa9.08□□□□□ -0.96
SMAD1-215ENST00000515385 H3BUX3 64 aa9.07□□□□□ -0.96
SMAD1-215ENST00000515385 K7EQD1 137 aa9.07□□□□□ -0.96
SMAD1-215ENST00000515385 BLCAPP62952 87 aa9.07□□□□□ -0.96
SMAD1-215ENST00000515385 A0A0U1RQV1 116 aa9.06□□□□□ -0.96
SMAD1-215ENST00000515385 SLPIP03973 132 aa9.06□□□□□ -0.96
SMAD1-215ENST00000515385 PMAIP1Q13794 54 aa9.06□□□□□ -0.96
SMAD1-215ENST00000515385 BPESC1Q9GZL8 116 aa9.06□□□□□ -0.96
SMAD1-215ENST00000515385 A0A1W2PRX2 142 aa9.06□□□□□ -0.96
SMAD1-215ENST00000515385 PAX4O43316 350 aa9.06□□□□□ -0.96
SMAD1-215ENST00000515385 CCL21O00585 134 aa9.05□□□□□ -0.96
SMAD1-215ENST00000515385 BRD3OSQ6XYD6 125 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms